Contig Data
morexGenes
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Map Locations of contig_42927 (5461 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42927

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58726 1 2963 bp MLOC_58726.1 Available Available LOC_Os03g52860.1, FRAME:+2, EVALUE:0.0, 13103.m05766 protein lipoxygenase, putative, expressed





CDS Structure of MLOC_58726






Contig Sequence (5461 bp)

>contig_42927 5461 assembly3_WGSMorex_rbca.fasta
ACTTGTGGATTAGGTAGGAAAAAAAATTTAGATGTGCACACCCTCCATTTCATTCCTGGC
TCCGCCACTGGTTGCATCGAGCCGAAGGGGCTACGTGGTGCTCTTCGCATGCGGTGGCGA
GGCTGCCTTGGAGCGAAGGCGTCGTAAGCTCCTACGGAGCGGCAAGAAATTCAAACTAAA
AATTGATCTCCTCCCGCTTGAAAAGCGGCTGTTATGTGTTCTGATGTACTCCCCTGTAAA
AATAATATAAGATTGTTTAGATCACTACGCGTTAAAAAGCTTATCAATGTTTACAAAGAT
TTTTATGGGACGAAGGTCACTTGAGAGTCCAGACATCCCCTATAGTCTGCACACAATAGA
GCATTTGTGTCTTGATGCCACGATAATCAGCCCATGCCATGCATCAGGATGCATGCTTAA
TTATAGTACAACTTGTTTGAGATCTTTTCCTGATCCCCTACGTAATCAAATCGACCGGAC
ACTGTAGATCCCAGCGAGGATCCAATGTCCACAGTGCTCTGCTCACACCACCCCTCTCGT
GCACCTATAAATAGCCTCCCGGTTGCTCTTGGAGCTCTCACACACCCTCCCTCTCAATCT
CTCATTGTCCTTAGCCACACACAGCACCAGAGTACGTGTCCGCTTTTCGTTTAGAAGGAA
GATGTTGGGCGTGAGAAACCTGGCCGGGGCAGGGGGGCTCAAGGGCACCGTGGTCCTCAT
CCCTAAGAAGGCGGTCGAGTACAACGACTTCCAGGGCACCGTCATGGGCGGCGGCACCGA
CACCGAGCTCTTCGGCGGCAGAGTCACCTGTCAGCTCATCAGCTCCACGCTCCGTGGCCG
CAGTGAGCACTCACCATTCCCTTTAACTCCCCCACAGTGCACGTACGCGCTCCTTTTTCA
TGCATGCTGTCCACCTCAGCATGATGCCATATCAGCAATCCGTTTGTATACTACTCTCTT
CGTCTTAAAAAATTTGTCTCAGTTTTGTCAAAAATAAATATATCAAAATGCTAAAACATG
ATTAAATACATTCATATTTAGAAAAATCTAAGATAAAAATTTTGGGACGAAAGAAGTAAT
AATGTGTGGTGTGGTGCAGCTGCAGGCAACGCGAGCCGCGGGAAGGTGGGCAAGGAGGCA
AACCTGGAGCCGTGTCTCGTGAAGAAGAGCCTGCTGGGCGTCCCGACGGGCGAGCAGAAG
TTCGAGGTGACGTTCAACTGGTCAATGGATCTGGGCGTGCCGGGCGCGATCATCGTCAAG
AACAATGACGAGAAGGAGTTCTTCCTCAAGACCATCACCCTGGACAACGTGCCCGGCCAC
GGGGCCGTCGTCTTCATCGCCAACTCCTGGGTCTACCCGCAGGCCAAGTACAGCTACAAC
CGCGTCTTCTTCACCAACGACGTACGTGAGCATTGCTCCATGCATGATCCGGTGGATTTT
GCTTTCGCTTGCTTGCTTGCTAGCTCATGCAATGTCCGGTCCGTTGTGCATGATGCATGC
AGACGTACCTGCCGCACCAGATGCCGGCGGCGCTCAAGCCGTACCGCGACGACGAGCTCC
GGAACCTGAGGGGCGACGAGCAGCAGGGGCCCTACGAGGTACACGACCGCGTCTACCGCT
ACGACGTCTACAACGACCTCGGCGACGCCCGCGACGTCCTCGGCGGCTCCACGGACCTCC
CCTACCCTCGCCGCGGCCGCACCGGCCGGAAGCCCTCACCCAACAGTGCGTGTGCCTTGT
TGTCTTGTCTCCCCGTCCTTTCCATCTCCAGCTGATCTGACGATCGGAGACCGCGCATGC
ATGCATGGTGCAGAGCCTGACCACGAGAGCCAGGGGAACGTGTACGTGCCATGCGACGAG
CAGTTCGGGCACATCAAGGAGTCCGACTTCCGGGAGTACGCACTGAAGGCGCTGGTGCAC
GGGATCATACCGATCCTCCGCGAGTTCTGCGACAAGGACGACACACCCGGCGAGTTCGAC
TCCTTCGCCGACGTCCTCAAGATCTACAAGGACGGCATCAAGCTGCCCAACATCCGGGGC
AAAGAGCGCAGTAGCCTCCCGCCCCAGCTCGTCAAGGACATCATCACCCCCATGGGCATG
GGCGACAACCTTTGGTCCCTCTTCAAGCTCCCCAGGCCGCACATCATCAACAGTAACTAC
TCCTTCCTAAAAAAATGCTTCTTGTTTTAATACTCCACTATTCAGCGTTTTGGGGGAGTA
CTAGCTAGCTAGGAAATGGTTAATTAAACCGAATCATCAGCAATATAATTAATGTTAATT
GGCATCACAAATCAAGAGGACGAGAAAGCATGGATGACTGACGATGAGTTCGCGAGGGAG
ATGCTGGCCGGTGTCAACCCCCTGATGATCAAACGCCTCACGGTGAGTCAACTCAACAAT
CAATCAATCCAACCATATACTATATGTATGTCACTAGCTACCCAATATTTACTCATACTG
TTTGAGGAAACCGTGCGCGTGCAGGAGTTCCCTCCCAAGAGCAGTCTAGATCCTAGCAAG
TACGGCGACCACACCAGCACCATCACCGAGGCGCACATCGCCGAGCGCCTCGAGGGCCTC
ACCGTGCACCAGGCGCTCGCCAGCAACAGGCTCTACATCGTGGACCAGCACGACAACCTG
ATGCCGTTCCTCATCGACATCAACAATCTCAGCAACAGCTTCGTGTACGCGACCAGGACC
CTGCTCTTCCTGCGAGGGGACGGCACGCTCACCCCGGTCGCCATCGAGCTCAGCTCGCCC
CTGCTCCAGGGCGACCTGACAACCGCCGAGAGCACCGTGTACACGCCGGAGGACGCCGGC
GTCGAGGGCTGGATATGGCAGCTCGCCAAGGCCTACGTCTCCGTGAACGACTACGGCTGG
CACCAGCTGATCAGCCACTGGCTCAACACGCACGCGGTCATGGAGCCCTTCGTCATCGCC
ACCAACAGGCAGCTCAGCGTGACCCACCCGGTGCACAAGCTCCTGCACCTGCACTACCGC
GACACCATGAACATCAACTCGCGGGCTCGGGGGATGCTCATCAACGCCGACGGCGTCATC
GAGAAGACCGTGTTCCCGGGCAAGCACGCTATGCCCATGTCTTCCATGGTCTACAAGAAC
TGGAACTTCACGGAACAAGCTCTGCCCGACGATCTAATCAAGAGGTGGGTTGGTAGAAAT
AGAATGCTAATTACGAAACAACCACACTCAGTCACAACTGACATGGCCCGTACTGTCTAG
TGTGTGTGTGGTAAGTGATGACTACGAAAGACTAATGGATCTTGATGCATGCATGATGCA
GGGGCATGGCAGTGGAGGACCCATCGAGCCCACACAAGGTGCGGCTGCTGATCGAGGACT
ACCCGTACGCGGCGGACGGGCTGGCCGTGTGGCACGCGATCGAGCAGTGGGTAGCAGACT
ACCTGACCATCTATTACCCCGACGACGGCGTGCTGCAGGGCGACGTGGAGCTGCAGGCGT
GGTGGAAGGAGGTGCGGGAGGTCGGGCACGGCGACCTCAAGGATGCGGCGTGGTGGCCCG
AGATGCAGACAGTGGCGGAGCTGATCAAATCCTGCGCCACCATCATCTGGATAGGGTCGG
CGCTCCACGCGGCCGTCAACTTCGGGCAGTACGCCTACTCAGGCTACCACCCCAACAAGC
CGTCGATGAGCCGGCGGCCGATGCCGGTGCCGGGCAGCAAGGAGTACGCGGAGCTGAGCA
GCGACCCGGAGCGGGCGTACATCCACACCATCACCAGCCTGTTCCAGGCCCTGGTGGGCA
TCTCGCTGATGGAGATCCTCTCCAAGCACTCCTCCGACGAGGTGTACCTGGGCCAGCACG
ACACGCCGGAATGGACGTCGGACGCCAAGGCGCTGGAGGCGTTCAAGCGGTTTGGGGCGA
GACTGGTGGGCATTGAGAAGCAGGTGATGGACATGAACGAGGACACGCGGCTGAAGAACC
GCATCGGGCCGGCCAAGTTCCCCTACATGTTGCTTTTCCCCAACACCTCCGACCACACCG
GCGAGGCCGAGGGGCTCTCGGCCAAGGGCATCCCCAACAGCATCTCCATCTGAATAACTA
GTGAGGGAGTGCTGCCGGTGCATGCTTGCCATGCATGACCTCAATAAGGCAATAACCTCC
GGTATTGCTATGGCCTTCAGTTTGGGCCTTTTAAGCTCCTCTGTAACCTCTCTTTTTTTG
TCTAGGTTCAAATTTCCCAAATAGAATCCGACCTTTTCTAATAATAAAAATATGAGGTCC
CTCTTTGATATCATTTGACTGAAACTAATGTCTTGCTTACAGAGAAGAAAAGAAACAAAA
GAAAAACATAAGCCAACGATACAGCATGTGACGTCCAACATTAAGTTCCCTATAAGTGTT
CTTGAAATCTGATAAATACTAAAATGCTAATTGCCTTTGGAGTGATCATGCTGGGGATCA
GAAAATTCATCTTGCTAACTGGTCATCTCTGGGTATGACAATGGAGTTTGGTGGTTTATG
GGGTGCCTAGCTAACCTTCAGGACTTAAAATGTTTGTCTGCTGGGATCATGGATTAAGAG
GTTTATTCAGGTTGAAGGTTCTCTTTGGGGCTAAGTGGTTGTTTGGTTCGCGACTAAGGT
TGACTTAGGTTGCCACATCTAAGTTTAGGCAAATTTGACTTAAAAAGGTGCTTGGTTCAA
GCCTCGCATTAGGCAAGATGCTTTTTGCCACATCAGCCGCGTCGGGCACCGTCTGATCCA
ACTCGATCATTGGTGCAGCGCGACTCTGTGTCCTCCACACGGACGTACGTAGCCACCTTC
GTGAGTGTGAGTACGTAACCTGTAGTAGCGTTCATTATTTTATTTTATTTTTGACCATCC
TTTTCATACCTATACTTTCACACAAAATATTTTTTGCCAGACAGTCACATAACTTTATAC
TAGCAAACTCATTGAGTCAAGGTTGCTTAGCGTCCTTGAAGCTGCTGCGGTCACCTTCAA
AGCATTGCCAACGCAGTATAACTGAAACAGCTAGACCGGCATCGCCCCTAGGGATGGGCA
TATTAACAAAATCCGATATATCGGACTGGAAGAACCGGGACTGAAGCCGAATGGACCGAA
ACCGAAAAAACGGTTCCTATTTCGGTCATCTAAACTGAAGAACCGAAATTAGTATGGTAA
ATTCGGTTCTTACACACAATTGACTTGAAAAACCGAATTTATCACGACTCAGGCTTCCCT
GTTATGGCTGTCCCAGTCCAGCTGGCCAGTCAGCGGAATATTGTTCAAGGCTTTTTTACT
TCTTTGGTTTTGTCCACTAGCCCACAATTGTACTAAATCATTAAATCAATTAGCCCATAT
ATCTCTACTATTAAAGCAGGATCGAACGTCGTGATGGTTCGACCTCCCAGCGATGGTTCG
ACCTCTCGTTCGCTCCCCACCTCCTGCAGTTGGCACTTCCACCGCTTTTTTTCATCCCTC
C