Contig Data
morexGenes
Links



Map Locations of contig_42741 (5100 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42741

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58517 2 1678 bp AK370728 Available Available None





CDS Structure of MLOC_58517






Contig Sequence (5100 bp)

>contig_42741 5100 assembly3_WGSMorex_rbca.fasta
CCGCCGCCGCTGGAGCGCGTCATTCTGTCCCGCACGCGCTAAAATGGCGGTTTACCGCGC
GTGCCTTTTTGCACGGCTGTTGGAGATGCTCTTAGGCAATAAGCAGGGTCGGACGCAAAA
TAAGTGGGGCGAATTGTCAAAAAGCCACGAGCTTGGAGTGGATCTGGACTGTCCGGACTC
TCCAAACCAACCTGATTTGTTGTCCGATTGGGGGATTTCACACGTCCAAACAGGTTCAGC
CCAATACAGACATTCATTATGAATTCTATGGACACAGAAAAAACAAGAGCAACTAGATAG
CGAGATAAAAACATCAAAAAAAAGTATATGAGGATGAGCATGCGACGCAAGAAGAACATG
ATTAAAGCCTTGATGAACTCATTGGGTGTTAAGGTAGATGATCCGGCCGAGCTCAAGGAG
ATGGTCAATGATTTTTATAAGAACATGTACACGTCAGAAGGGGTAACCAACATGGCTGCC
GTGTTGGATCATGTTCCACAGGTTACTATTGAACGAATGCCATCCTGTGTGCGGTTTACA
AGGAAGAGGAGGTCAAAACTGTGCTATTTCAGATGTTTCCCACAAAATCTCCAGGTCTGG
ATGGATTCCCAACACACTTCCATCAAGAACATTGGGATTTATGCGGGGATGATGTAACAA
AGGCTGTCCTTCAAATTGTCGGAGGAGATACTTTTTTGGTTCTGCTTCCTAAGATAATGA
ACCCATCTTTGCTTTCTCAATTCAGACTGATAAACTTGTGTAACGTGTTGTACAGATAGC
TTCAAAGGTGATTGCGAACAGATTAAAGCAAGTTTTACCAAATATAATTTCAGAAGAACA
ATCGGAACGAATTTCCGGGTAGAATTATCACAAGGAATGTCATTACGACGTATGAGTGTT
TGCACTTCATGAAGAGAAGCAAGGCTATGAGAATTATATCGTCAGCGCCACTAACCCGTC
GTCGTCGGGGGCCTCCAGCCTCCATGTATGAATTTCTGTTTCTTCAAAATATTCGTACTA
GTAACAATGCTTGGCACCCCGTGTAGAACTTTGTGGGTTCAGAGAAACAAAATATCACCC
CTTTAGTAAAAAAAAATCTGCATAGTTATTCAGATTGCTTGAGCAGAACACAAAGTGTTA
CGAATTCCCCACGAAAAAAGTTTGCAAAAAGAAACATTGCAAAATTATTGAATCCGGTCT
TTTTTCCCTATGAATATTGATTTGTTTTCACAATATGCTTTTTTGTAAAACGTCAATAAT
ATATATTGACGTGGCCGCACCGACCAACTTCATCGTCTCCCTCCCAATTCATCGGTGCCG
ATGCACCAGGGTCAGGCATTTGGCCAACATACAAGTTATGGCCTTCATGAATCCATCGCG
ATGGCCTTGGGCAGTGGCATTGAGGGCGGGGTCGGACACAAAATAAGTGGGGCGAGTGGG
TCTGGATTGTCCGGACTCCCGAAACTAACCCCGATTTGGTGCCCAGTTGGGGGATTTCAA
ACGTCCAAATCGATCCAGCCCAATACGAACATCCATTATGACTTGTGCGGACATAGGAAG
AAACGTGCATCCGAGTTGAAAATTCCATAAGGAACTGAAATTCTTAACTGTTGTCTGTTA
TCTCCTCTTTGACTATAATGCTAGGTTTATGCCCATATAAACAAAAAAGACAAATGTAAC
AAAACAATTAAAAATGAGAGAGAGCATTATGATGACCTTAAGAAGAAACGATGCTAAGTG
CGTGGACTTATGTAAAGTGTCTATGAACAATGTATGAACAAGTTTAGTCATTAAACAATT
AAATAAAGTAAGCTTAGTAGGTCATCGATTTATAGGGCGTGCATGTATTTCTAGGTCATT
GATTTGACTAGATAAATACGAATTATATGTCATCAAAAGTATATAATTGAATGCTTAAGC
AGATGTAGTTTCTAAACATATATTTTTCATCAAATATAATAGCCCCTCCGTACGGAAATA
CTTGTCAAAGAAATGAATCAAAATGGATGTACCTAGAACTAAGATACTTCTAGATACATC
CATTTTTTAGACACGTATTTACAGACAAAGGGAATACATATTTAGTTAGTTAAATTGTCA
ACCTAGAACGATGCACATGCCTTGTAAAACAAGACAGGGGAAGTACAAAAGCTAAGCACC
CATGCATTGTGAAGACTGGTTGTTAAGCTTTTTAATGCACTTAGCACCTCATCTAAATAC
CAATGGCCTTGTATGCATTGAAACCCATAAGGTGAACCATTTCAACAGGCACGAAAAATG
ATGATGTCTTTTTCTATTACAGAACCATTGTTGATATCAATCAAAACAGAAATCAGGAGG
TCAAGAACCAAAGATACCGTGTAAACAAGATGCTGAGTCTTGGTGAAAGATGAATGATTT
GTCCTGATCGATCCAGGGAACACCGAGCTATTGGGACGCATGGCATGGCAACACGCATGT
CCTCTGCTCGTGTTACCTGATCGATCAAAGTTTGTAAGGGGGAAGCTAACAGCATTCATA
ATGACCTTAATTTACTACTTGGCCTTCTTAACAAGTGTGGAGGTGCGGAATTCCGCATCA
TCTCTAACGAAGGTCCACCAAAGATAGGTGAGAGGAATGGTGCTCGCGTGCCACAGCGAA
TGTGCATCAGCATACCCCTTGTATGGAGGAAAGTCATACACTTCAAGAAGCATAGCTAGA
GCTCCTCCAAATATGACGATCCAAACCTTGAATCGTGACGGATGATGGGTCATAGCCGCC
CAGATTGACCATGCGACAACATGAACCACACCCATTGCCACACAAACTTTCATATTCCAT
CCTGCAAAGGCATATAAACATAGCAGATGCACATGAATTAATAATATGTTTGTGCACAAA
AGGCAAAGTGTGTGTAAGGTAAATTGAAGACACGGTTATTCAGTCCGTTAACGATAATAT
TCCGTCCATCGTATCTTTTATTTAACTTGTAATAACACCACAAAACATGGTAAAAGTAAC
AGCTACGAGATTGTTGAGCCTAGCTAGTAAAATATTTAACTTCATATATATGCAGGATAG
ATCTTGTATGAATGAAGATAGAACAAGATCAAATACTGTCGGGGAAGCAAAAGGAACTTT
ACCGTAGTCAAGGTCGTAGAAGTTAAGATACAAGATGTGTGTAGTAACAAATGCTAGAAT
AGGTGCAGCAAACATCACCCTACCAGCCTCATCCTTGACATTAAAAGTTCTTAGCAAAGT
AAGGATTAAAGAGTAGCCAAGTTGGGCCACAGCTGAAGAGTAGTCCAGTTTCTCAGTCAA
GTCAATATCCCTGCAAAATGAAGAATGCTGCTGCTGAGTAAGATATCAGATATTATTATG
ACAGCATGCCCAAGCTTTGAGCAAACACACACCTAGTATGGAATATAGTGCTCCAGAACC
ATGCATTCAATGATAATATTGCATAGATATGCCATAAGCCAGTGAACTCATAGTATGTCC
TCTTCGTCTGAGGTCTAAGAGGTAATCTGTAATTCACTTGCAGGAAGAATAAAAGCCAGC
CAGTAAAGTGCGTCAATAGGTTGAGAGCAGACAGTGCAGCTGAAAGGGGCTCCTGATAAA
TGGCAAACAAGTTAAGACATGTAGTAGTGGTAGTCATCATGGTGAAATACTAGTATCACT
CATCAACATACAAGCCAAAACATGCCTGGAAGACAGAAACACGTTTGAAGGGCCATTTTC
CATGATATTTAACAGGGCTCAGGCCGCCTAAATGTCTTTCCTCTTCTCTCCGTATCATGC
AGTAGTAGCGGCAGTCTGTCTTACAGTTTTGTTGCTTCCAGTGCATGTAAAGGGGCTCCT
GTGTGTACCAAGAACTTCCAGCAGATGTGCTGTGATTCTCCTGGGACTGACAGTTGCTGA
TGATGTTACTTCCAATAATCCCTGTATTCTGACACTCCTTCACACAAGTTCTGCAGGTTG
GTCACGACGCAAGTTACCAGAAATTTCTAAACAGTGTAACATAAGAATGACAGCAACTGA
AAGGTCAATAGATGAACAAATTTCAGGAATCCAACCAGTTGTCGGTTTTTTTTTTTTTTT
GAAAAATACATAAGGGAAAATAAATATGGTGAACTCAATTATTTTTTACTACGAAACACA
TCTAGAATCTAGTAATAGTCACTGTTTAGAGTCCACTGAGTCCAGAAAAATAGGACAGGC
AGAAAGTAGATATCATGGGTGGTAGACCGATTGCACAAGCAAAATGGAAGGATACTAGAA
GAAAAATAATACTGCAAGTATGATACTATCAATTAAACATGAACAACTCAACACGCTAGA
AAAGAAATAGCTTTCACAGGTGTCGCCTAGTAATTGACTTATGGTAATCCACTATTAGTG
TTTTGATTAGAACTGGGGTTATTCTACCATTGTGCTGCTATATCTCCTAAAGTGCATCCA
CATAAATTCAATTTATCGTATAATATGAGATATTATTTACTATTTGTTCTTGTATCCTGA
AATTTGACCACAAGCACCTAGGCATCATGTCACCCCAGGTTGCCTCGACTGGTTGTCACA
AAACAGCTATGGGACAGATGATGTGCAAGCAAACACATCATTGATTAAGATCATTTCTGT
AACACTGTCCCACAATTTAGCAAAATCTAATCAACCGCTTTCAAAGCAATTTTATTTACA
ATTTGATAAAGCTAAACAAATGTTGTGGTACTTTGGACTGAAGGAAATCCATAGGAATTT
GGAGAAACCGAATCATTTAGAATTTGATCCTACCTTTCCGAACAAAGAAATGGGCCCCTG
AAATTTCAGGGGTGCTATTCAGCAATTCAATAAAATCAAAACTTAAAAAATACTAGAATC
AACCTATACAGCAAGGCCTGGGATCAAGTATAAAGAAATAAGCGGCAATCTGGGGCAATG
GTACATCATCTGCAGCACGAGATGAGCCAAGAACTGCTCTCACCTGTACAGCGGATGAGC
ATCTCCCGGGCTGGCCTCGATAGAGCCGACCACGAATCCGACTGCAAGAAGGGAAGCCAA
TCGAACTACCCAGAGGCTCCTTCCGGCCATCCCTGCGGTCGGGCGCGCATGGGTTGTGCG