Contig Data
morexGenes
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Map Locations of contig_42732 (6916 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_42732

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58510 2 6169 bp MLOC_58510.2 Available Available LOC_Os04g59160.1, FRAME:-2, EVALUE:8e-140, 13104.m06235 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_58510






Contig Sequence (6916 bp)

>contig_42732 6916 assembly3_WGSMorex_rbca.fasta
CCCGTCGCGTTGTGCCCCTCCCGAGCCCCGATGACGGCCTCACTCGTGCCTCGCCGCGCT
GCGCCCCTCCCGAGCCCCGGCGGTGGCCTCGCCCTCGCCCCGGCGGCCTCGCCCTTTCCC
TCCCTGCCAGGACTCCTCTCCCCGCGCCCCGCCAGTCCTCCTCTTGCTCCCTCGCAGTGC
ACCTCTTCCTCCTTCCTCTTTCTATCAAACAAAGTCTCACCTCAGCATGTATCAACACAT
ACACTACTATCAAACAACAACAAATGCATCTACTCAGCATGTTTACACTGACCATATCTT
AAATGAAAACATCAATGCTAAATAGAAAATGTAACCAAACACATCCTAAGATGAAAAGAC
CCTTGGACTAGGCGTCATTTCAAAGATTGCCTGGGCCGGCATGTAAGTGCAAATTAGTCA
TGTTTGGTATGTTGTGCATGGGATTTGAATCAGAGGGTTGAGGATGAACGGATGCTTAGG
ATACCTGATCCCCCCGATGCATACAATATGTTGCCGTATATTTAACGCACAAATCAAATT
ATCACTTAGCCAAAAAATATCTTTACAAAACCATAGTAAAGCCATAGGGGTGCAAGGAAT
TATCCTGTTACAATGCACGGACGTGCGGCGGACTGAGACGAAGAGACAAAAACGGAATGA
AATGAATGGGGCATATAAGACTAACAATATCTCTTGTTGCAACCCACGAAGAGACAAAAA
CGGAAGGAAATGAGTGAGGCATAAGACAAACAATATCTAATATCTCTTATTGCAACGGGC
ATTTTTGCAAGTTCCTACAAAGCATAGTAGTGCCATGCGAATTCCTTATTTCAAACGTGT
TCCGAGACATCATGAAAGAGGACTGAACGAAGCAGAGTACACACTGCTTACTCTTACTAC
AAGGAAACAAAATGACGATCTGGTAGTGAAGGGGGATTGAATGATTTGTCCCACTTTACA
AAGGGTTGGATGATTTGCCCCAGTGTTATCTCAATGACCAATGACCCCGGTCCCACCTGA
CAGTCTCAGGAAGAGGGCAAATTATCAAATTAGGAGGTAAAGTGGGCAAAAGATCCAATT
TCTAGGTAGTGAGCAATGAACTCAAGCAGAGGCTGCGAACCCCTCGTGACCGGCGGTGGC
TGGAATGCTCCGTCCGTTAGGCGCGAAGCAGCTGTTGCGGCGAATCTCCCCTACGTTTCC
TCCGGGTTGGTACTGACTAAGCTTCACCATGGAGTCACGGAACTGGCCGTAGAACCACCA
TTTGTTCTCGGCGAGGCCTTTGACCGCCCAGTCGGTGCGGCCGTCACTGATGAGCACTTG
GTCGGAGGTGAACACCCCCTTTCCCTCCATCAGGTTTCTGAAGTACCTGTTGTCGAACAC
GATGGGGGTTTCCACGTCGAGGTCCTGCAGCCGGTTCGGGTCGTTGGAGCAGTTGGCGGC
GAGCCTCCGGGCGAAGTCGGCGTCCTCGGAGAAACGGTTGTTGAAGGAGCTGCAGTGCGC
CTTCCCGACGGTGTGCGCGCCAGAGAGCGCGACGAGGTCCATGGGCTCGAGGTTGCGGCT
CTTGAATGCATTGATGAGCGTGTCGGCGTCCGCGGTGGGCTGCGGGAGGTCGAAGACGGC
GCTGCTATTAGCCGGCTCGAGGCTGTCAAACCGGCCGAGCGGCAGGTCGTAGAAGTAGAA
CATTTCGCTTTCCCCGGCCTGCATAGTTTCGCCAGTCAGGTAGGTTGTACTACAACTCTA
CAAGCTACAGTAGATGTTTTTGCTGTACAACAGCAGCAGCGACAGGCGTGCGTACGTACC
ACGAAGACGGCGTCACGGGTGGCGAGGGCGATGATGTCGGCGCAGGAGACGGTGGCGCCG
CAGGCGGCGTGTACCTTGACGCGGACGTCCTCGATGAGCTGCATCGCACGCGGCTGCAGC
GTCTGGTTCGGCGGCAGGTCCCGCTCGCTGTTAGGTCCCGTCAAAAGGACGGACGCGTCG
CAGCCCTGAAGTGCCGACACTTAGGCTGAGGTAGAAATGCACAAATAACGAGCAGTTCAA
AAATGGAATCAAGAGTCTCCCCCCTACCTGAGGAAAGCAGTCGTGGAAGAAGATACGGAG
GAGGCCGGCGGCGATGGCGACCTCGCCCAGGACCGCGCTCTCCACGATCGGCCACACGAT
GTCTTGCAGCTGCGGGCAGGAGTTCGCGTGGTAGTCGTAGGAGAGGCCGTCGGCGAGGGT
CACAGGACTGCTCGCGTCGGCTGGCATGGAGATAAACGACCGCGTTGAAAAGGCGGGGGC
CAGCACGGCGGCAAGGAGGCCCATGACCAAGATCGCCCTGCTCGACGCCATGGATCTTAG
CTAGCCTGCCTCTACCTGCAGTGTAAACTGGCTGCAGCTGCCGGAGTGTGGCTTCCTGGT
GTCAACTAGATGCTGTCATGTATAAGACGGGCACACCTCTGCAGCTGGTGCCGATCTGAG
CTACAGAGCACATGCATCGGCACTGGATCAAGTCGAAGGCAAGCTACAGGGTGACCACGT
GGTGATCCAAAAAAATGTACTATTTGTACTGATTAATTAAATTAATGGTTGTATGCCTGT
AGTTTCTCCATGACTGTGAGAGGAAGAAGTCTACACGTGGTTTGTCGACAACCCATGTGC
GTGGTGACTTTCGCCATGGTTGGTTTGGTTGGTCCTGGTGGTCTAGTGCGATCCCCTCAT
TTCGTAAGATTTTAACACTAAGCTTTTAGGGAATCTCAAAGATTCTTCATGCGTAAGACC
CTCAAAAAGGAGGTTGTAATTCCATACACTGCGATCTTACATCGAATTCAGCAAAGATTG
ACCTTGGATAAAATTACATCTTTCATCTGAGTATTGTACTCATTCTAGTTCTTTTGCAAT
CCAAGTGTATGCTCAACAGATATAATTTCGTTTGCTCTAAATTCTGCTTCAGGTTTTGCC
AAAAAAACTATTTATTCTAATTTTACTGTTTACAGAAGGAGCATTTGAGGAAGTGTACTT
TCATGGTGTATCATCCCTGTAAAATAAGTAACCCGGCGTTCTAAGGCCCTTCCAAATGCT
CCACTTAGAGTGTCCAATAGCCATTTTCTTGATGTGAAACTCCAATTAATTACGAAAAGA
AGTTGCGGTGTCCATATTAGCTTTATGCAAGTTTGTCCTACAATACCTTCAATAAATTGT
TAGCGGAGTTGTATTCTTTATTCTATTCAGACAACACCTACAATGAGAGAAGGAGCGAGG
AAACTATAATTACATTTGTTATTGTTGGTTGTCTAACATACAACCTCGATTTCTTTCTTA
TTTCTTTCTCATCCACACAATATTTTGCAGAGTTGGCACAAGTTATGGAGCGTTGGTATG
GCCTCATTCGAGTGCGCTTAGAGCATTTACGATCGGACTTGGCACATCTGGCCCCTGTAC
GCCTACGGATGCGTCCGTGAATAGCACCTGTCGGCCATTCATATGTTGCGTAGCATATTC
ATATACCTTAAATGTCAATTCTCAAATCCATGTAATTCATGCATGTCGATCATCCGATAT
AAATTGTTTGAATTTAACAGTTTAAAACAAAGCAAATCAAACCACAGTTCAATAAATCGG
ACATGCCCAAATAAAATCAATGTCCAACGAAAAGGGGTGCTTGTTGGATCACTGGGCAGA
CGCGACCATCCATGCCGTCTGCTCATCTAGCTTGTCTTGCTCCGCCTGGACAGCCAACTC
CGCCTGCATCTGGGTTGTCTGCTCCGCCTCCATCCTGGCCGCATGACCCGCTGCCGAAGC
CGCCCTCGCTGCCTCTTGCGCCTTACAGTCAATGATCTTCTTCTCCGTAAGCCACTTCTT
CGCATGCTCATCCCAAAGGTTTCGTTCGCAAACATGATCTTCGTATATCCGCGTCCCGTG
CGAGTTGCAACCTTTCCTTCAGCTCAATCTCTTCAAATGTCTTGGCCTTCTCGAGTTCCC
ATTTGATCGCCGCCTCTTGCTTCTTCAATTCGATCTTCTCCCTCTCAATTTGCAGCCTCT
CCTCCGCCCTCATCCGGTCTCTCCATCCTCTCCTTTTGCGCATCCAACATAAGTCCGTAC
CTCTCATCTTTCTTGTTCCGATCCCTTGCCGAAAAAATGCCTGTACATGTGGATGACATT
TTTGTAGCCGCGTCGTCACGGGAGACCCTTGCCTTCTCCCACTTGTTTCCCATGACTTGT
CGGCTATCCTTTGGCACGGTAGCTCTTCCATTCGTGACAACAACATCGCCATCTTCATCG
TCCAACCCAATGGATTGGTGGGAGTTTGAGCCATCATTTCTCTTCTTGCCGGATTTGAGA
CCGGCCACAACTTGTGTTCACTTTGGCTTGCCATTCAATATGATCCAACACTGGCTAAAA
GCAAATGCCTTCTTCTCCAGCTCATGATACATAGTGGTCGCCACCATCGTCTAGCAAACA
ACATACGCATGAGCACAAGAATGCAAACATAAGAAGCATATTCAAATGACAACAAGATGA
GGCAATGGAGCTTGCGTGAGTTGCCACTTCCATCCGACTTGAACGGCGTTTGGTCACTTG
TGAGTAGTAGCCGACGTACTTGTTAACTTCCCCTTGAATGATCCCCCATCGATGTTGGAA
AGATGCCACATTGCGAGTGGTCACGATAGGATGCGGCTCCACATACTCCTTTTGTTCGCG
ATACTCCTTCCAAATCTTCTCCCAATACGTGTTTCCATTTTGTTCGCTGCCGCATATTGG
ATCCACTGTTGTGGCCAACCAAGATTTGACCAACAAGATGTCGTCAGATCTTGAGAAAGT
CGGGCCTCTTGCCTTCGTCGTCTTGCTCTTCTTCTTCTTCTTGCTCAGACTGGGATCTGA
TGTTGTCCCAACTTCAAATACAGTGGTGTCCTCCAATTCATAATCCATTTTGGTCGGACC
TTCATTGTCATTGATCATGCTTGACAATTACGCATCCTAAATGATCATGGTTTGCAAGCA
TTCATCATGTGTGAGTTAGTGGTCTATGCAAAACATTGAACATTTGATCGCTCAGGAGCA
AACAAAACATATATGGTCTTGTTCTATCATTCCGTCGAACATGTCGAGTCCAGCCGAGAC
GCCGTCAGTGCCCGTGCTCATCCGCTCCTGAACGAGATTTGGCGAGTCACATTCGTCGAC
CACCGGCATCTGCATGGGTGGAAAGCTATCTGGAATGGCCCAACCGGCCGTCGAATCCTC
CTCCGTCTCAAGGGTGCCGGACGGCGTGATCCGCATCGATGCTCGGATGGATGGGGGAGA
CAGCTCCTCGAGCATGTCCGCACCTTCCTGCGACGCCGCCACCGCCTCCCTCTCTCGTTG
TCGGCGATGCCGCAGCTTTCGGGCAACGGCCTCCGCCTTGCAAGACGCGATGGAGGAAGG
GACACCGACCCGACCTACGAGGCGGACTGCGTCTCTGTCGCGGCGGTCGGGGACGGGTTG
GAAGACATCTACCACGGCAAATCGGTATTAGTGGTGAGGATGGGGAGCAAGGATGGCGGA
CAGCGAGGGCTCGAGCACGAGAAAGGTTGGAGGACAAAGGGAGGAGAAGCAAGGGTTTGG
AGGATTTGGTGCAAATTATGATGGGGTCGGGCTGTCGGGTTTGACGTGGCGCGCACGCCC
GAGCACCCTCATATCCGTCCCGTATTTGGGCTAGATATGAGGGATGTCGGTCACCTCAGG
CATTTGATGCCCATTTAAGAACCCCGTCTGGCTCGAAATTTTGTGACCGGACGGTCTACC
ACGGCGTATGAGGTGAGTTTGGGGCGTCCGGCTCTTACACAACACACATTAATTAATTAA
TTAATTGTTGGCATACTGGCTTTGAGCCTAAAATTTATTAAATGATGTACCCTTCCTTTA
GATACAACCCTAAGACATAAAACATTAGGGTAGGGTCTACTATCTATTACCTCGGTCCAG
AACTACCAGTCTTAAACAAGTCTAAGACAAGTAATTCAGGATGGAGGGATTATCTTTGAG
TTAACTGAGAAATAGAAAAAACTATTTATTTGTGAGTTAACATAGTTACACATTATTATT
TAAAAAAGTTACACATGAGTTTTGAATGTTACTATTAACTTTCAAAAGTTAAAATCACAA
TTTTTCTAATAGTTACTTGTAACTTTTTAAACTTCCACATGGTTTTTGTTGTTGTTGAAG
TTACTACTAACTCAAAAAAAAACAGAACAAAAATGTTATACCAAAAATAGAAAATTGCAT
GAATTTGATGCAGACGCAGAGGCTATCCCTAGGAATAGTGCACTTTCCTTATTTCTTAGA
TGGCGGATGGGGTGATTTTGCAATGGCGCCCATGGCGAAGAAGACGAATTGGTGCTGCTT
GTAATTTATTTCATTTCAATACAAATGGATCGATGTAATTACACTGTTGTTGGTTTCATA
TGAAAGAATTCAATGTAAATATTTTCATTTATTACTATTAAAAAAATAATTTTAATATTT
TTATGATTTTAGTATTTCTTATTTTTATGTTTGGAGTTAAGAATAAATGTCACCAATTAA
ATTCATATTTTTATGTATTTGTATTTTTGGCATGCTGATTTGCTAGACAACATTGTCGAT
ATTATAGCAACAAATGTAACTGGAATCTCATTTCCCGTTTGTATTATTTTCCATTTCGTG
TGTCCGATAATTATCTGCCTTAATTTATCTCTTTCTTCGTAAACCAACCTCAACCTCATA
TAAAAGTTTCTTTATTTAGAAATACCAAATTAGCTATGGTTGTTCCTTGCCAGATTGCAT
ACAAGCCTCCCAAAAGGGAAATTTCAGAAAAAAATTATTTTTTACGGCACATGTAGGAAC
CACACATTTGTGTTTTTATGAACCGAATATTGAATACAACTGTTGGCTTTTGAACGTGCG
TATGCAGCTGTACAGG