morexGenes - Barley RNA-seq Database

Contig contig_42644
Source Contig contig_42644
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_42644 (10573 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_42644

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_58413	1	2823 bp	MLOC_58413.1	Available	Available	LOC_Os03g21540.1, FRAME:+1, EVALUE:4e-96, 13103.m02581 protein TKL_IRAK_CrRLK1L-1.8 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MLOC_58414	6	2174 bp	AK369263	Available	Available	None
CDS Structure of MLOC_58413

CDS Structure of MLOC_58414

Contig Sequence (10573 bp)

>contig_42644 10573 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGTAGATGTGTATAGCCCCTTTTCTGTATATCCCATTGTATAA
GATGTTTTCTTGCACTTTTATCACATGTACATATACTAGCCTTTGGCCCCTGTGAATGTT
AGTTGCTCATTCCTAACAATTCATTGATATGGACACCCTTCACTGATCAGGCAGTTGACC
TTCAATTCTTCGGTTAAGCTGCAACATCAATTCTACCTCCTAGTATCTGAAATTATCAGA
AATTTGCTTTCTAATTCGGTTTTGTTTTGGTGGCATGGGTTTCCTCCCTTTGTTGCCAAA
TGGGGTAGAAACTTCTCCCGTGCTGGCTGGGGCGGATCCAGTGTGTTCGTGAAATTGCCC
CCTAGGGGTTTCTCACCCTGAATTTTCCTTACCTTACTAGCACCAAACACAGCCTCAGTG
GTCGAAAAAATTCCAGGGTTTGTTCTTACGATTTTTTGTTTCCAAGGATTGGGTCGGACA
ACCCCTTCTCCCACCGCACCAAACAATTCCTACAACTAGTAGTACCAAACCTGTAAAATA
TTGCATCGACATGTATTTTACAACTAGTAGTATGATAAATCCAAATGGACTGACTGGTTT
AGGATGTTTCCAAGTAGGAACATTATTCCACAATGTGGACAATCATTCAGACCATACATT
TTATTGTTCATTTGGTAGGTAGCTGATTCATTTATTTTGACCCCTTCACGGATCAGGCTT
TCTCATAAAGAGTTGACCATCTGTTCCTTCTTCCACATCCACTCCATGGCGATTTGTGCT
ACAACGAGCCTTCAACTATGAGAAAGATGCTTCATTAACTGTATTGCCGCATCAATTCCT
AAGAGGTATGTTGGGCTCAACCACGACTATCTTTATATCTTACTGAATTTTTACAATTTC
TTCAGTGGATAGTTCTCTACAGGTTTGTATTTTGACATTCTGATTCTTCGATTATATGCT
TCAGTAGGTTTCTATCTCTTCTGCTAGTCTTATTTCTTCTCCCTGTCAGAAAGCATTTAA
CTGCTTTTCTTTTGGTTTGCACCCAAAGCTCCAGTTAGTACCATGGCAGAACTGAACAAT
AGTGATTAATTTTGCTCTCTCCTTTGACCTTTTCTTATGCATGTATTCCCTGCATCGATG
AAGCCCAGCAACAAATTAATTGATTTTCTTCAATTTTGTGCAAATTACTGAAGAAGCATC
CTAGGTTTATTATAATTATTAAAACGTGACAATGTTTATTCTTCACCATCGGGGGACTAT
GTTCTGTTATTCAGTAGGCGAAATTGAGCACTCTTATTCTCTTGATATATGTGTTGGACT
GAAATCAATTCTTACTCCATGTTTTGTTCAACTTCCTACCCTTCAGCAGCCAAAGGAGAT
ATTTTTATGACAAACTATCTTTAAAACAACACACATCAATATTTTCGTCACTGCATAGGC
ATCTGATATGGCCACAAATCACTTGGCAATCATTGACTCTGCAAAGTACTCTTATGTTGT
TGATACCTCTGGTTATCTGGGATCAGAGTTTCACACTTTTGGAAACTGTTTTTCAGGTCT
CAAGTCCATATATCCAGCATACTAGTCAAAGATAACCAGTATACTCAGTCTTTGCTACTT
TACTTTCATATAAGATGGATCTTCGAGAAAGTACGGTGACAGAAATGATCCAAAGGGATC
ACAGATCAAAGTGGTTATCATACAACAATCATAACATAAAATGCTTTGCCGAGGGTGAGA
TAAGAGAAATTACCAGCAACTACAAAACTATCATTGGAAAAGGCGGCTTTGTAGAAGTTT
ACAAAGGTGTTCTCCAAGATGGAACAACAGTTGCAGTCAAGAAATTTATGTGTAATGCAG
AAGAAAATTTTGCCAAAGAGCTGAAAGTCCACTGTGAAATCAACCACAAAAATGTAGTTA
GGCTCATAGGCTACTGTGCCGAGGAAATTGCCCTAATGATAGTCAGTGAGTACATATCGA
AAGGGAACCTCAACGATGTTCTTCACCATGAACGCATTCCCATCACATTGGATACACGAT
TGCGTATTGCGGTGGAGTGTTCAGAGGCATTGTGCTACATGCATTCACAAATGTATACTC
AGATCATTCATGGTGATATCAAGCCTGCTAATATACTATTAGATGACAACTTCAATGCAA
AAATATCTGACTTTGGAATATCAAGACTTGTCAACACAGATGCAACCCTTTTCACTGAGC
GTGTAATAGGGAGCATAGGTTACATGGACCCTTTGTTTGCTCGCACTGGGCGTCTCACCT
CGAAGAGTGATGTTTACAGTTTCGGAATTGTTCTGGTTGAATTGATCACAAATAAAAAGG
CAACAATAAGAAATGGGGAGACCGGCATAGTTGAATGTTTCACCCAAGCTCTTGCAACAG
GGAAGAGAAAGGTGAGAGAGCTGTTTGATGTGGAAATCTCAAGCCAGGACGACATGAAGG
TTCTTGAAGGGGTTGCAAAGCTAGCAGGACAATGTTTGCGGATGGAGATGGATAGACGCC
CTGAGATGAGAGATGTGGCAGAACGTCTTCGGGTGCTTAGGAAAACTCAAGTTCAAGGAA
AACAAACTGTTTTTCTTTGGGGTGAAGGAACAAGCCAGCACCCCAAACCAACTGGCAATC
TTCTAGTTCAGTCACGCAACAATCTTTGCCATACAACGTGTGCCGGCATTTCTCACTCAG
GGACATAAAATCCGCGACAAGGAACTTTGATAAGTCGCACCTTATTGGTCTGGACTTATT
TGATAAAGTTTACTATGGAGTGATTGATGGAGGAGCAACAAAGGTGGCTATCAAACGGGG
CAGGCTTGAGCAGGATGTGAGTATGTTCCAGACAGAGATAGCGATGCTGGCAAACCTCTG
CCACCATCATGTCATATCACTGGTCGGTTACTGCAAAGAGAACAACCAGAGGATACTGAT
CTACGACTACATGGCTCGTGGCACCCTGTGTGAGAACCTTTACGCTAACAAAACGGATGA
GCCACTGCTTACTTGGACGCAGCGTCTAGACGTCTGCATCGGTGCTGCTCGTGCCCTGCA
CTACCTTCATGAGTGTTCCGTCATCCCTAATGATGTGTCGACGACGAAGATTCTACTAGA
TGAGAGATTGGTCGGCAAGTTTTCAAGTAAAGTCTCACTATGGCGGGATGCCATGGATGT
GACCCCCACACTGCGTATGGGACGTCTGGGTTGTGTCGATCCTGAATTTTACCGCACTGG
GCAACTAACACAGAAATCCAATGTGTATTCTTTTGGTGTCGTGCTGTTTGAGGTTTTGTG
TGCTCGGGCTGCTTATGATCGTAGTCTTCCAGAAAGACAAGCTATTCTGGTAGAATGTTT
CGTTGATTGCCAGAAGAAGGGAATCCTTCATCTGATTATTGATCCCTATCTTGAAGGAAA
GATTGCTCCACAGTGCTTGAAGAAGTTTGTGGAGATTGCTGAGAACTGTGTTAATGATCA
TGGTATCAACCGCCCTACAATGCAAGAAGTGATTGAGAACCTGGAGTTGTGCCTCACAGA
ACAAAGAGGAAGCCTTGATGATGAGACGCCACACGATGATGACACTAATGGTCCTTCAAG
GGCAGAACGCCGGCTGAACCTGGAGATGTGCCTTGCAGAATACGATGAGTCCAGCCACCG
CAATTTGGTATCAACCTTCGAATATGATGGTGCTTCTGATGGTGGTGTGGATTCCGATTC
CGAATTGCTAATGCCACGATGAGCAGGCAGTAAGTGGTCACCAATTTTCCTACTGCCAAT
GCTCTCTCCACCGACAGATCATGCCAGAGAATTACTCCATACATGTAGACTGCAATTTCT
GTCCCTTTCTTTACTGAAGCGAGCATTTTGTGTTATGTCTTTCTTCATGCTTTTCGCTAT
CGGGGTGTTGTGATGGATTTGTCAGGCCGTTCACCTGCACTATTACGTTTTCAGAAGGGT
TATCCCCAGTCCCTTTGCCTGCAGACGTAGGTTTAAGGAGGAGCTTCAGTGGTTACTTCT
AAGAGCAAAAAGAAAATCATGTGCTACTCTGGGCTCAGACTTTCAGATAAGCAGAGCAGA
GCAGGGCAGGGCATGTTTATGATTCAAATTCTGTAATTAATTGGGACGGTGATCCGTCTA
GTTTTATTATGCCGGACACATTATCTTTGATGTAACGGTGATTTGAAGTTAATAAAGTGT
GCCCCAGGGCATTTCCTAAAAAAAATCAAAATCAGAGCGGAGCAGGGCATGACGCAAAGA
TAGCTTTCTCTGCTGTTGTTGCATTTGTTTTTCATACTCCCTACTTTTTCTTTGGTTAGG
TTATTTGTCTGTAAATGATTTGCCAATAACCTAACCAATGAAGCATAAGCTTTCCAAAGA
AAATCATTTACAGACACAAAACTAGGCAGGACTTAGAGCTTGAAGATGATACAAAGATAA
ATAAATATATGTGGACATTAGTGGGGCAGAATGGAGACATAAAAAATATTGAAATCTTGT
TGAGATTAAAATGCACCTTATTGATCCAGGGACAAGATCTTGGAGAATTTCCATCCGCTC
GGTTATTTCCTCGCGTCGTGCCTGTCAAAATAGTAGAACTTCCAGTGATCAAGGGTGTAG
AAGAATAGTCAAAACCAGAAACAGCGCACTGAACTGACCCTTTCTGCAAGGCTATGGCTG
TCAGTTGCTTGACCCCTTCTTGCCCTCACATGGATGAAATCTTGCTTTGGTGGCCGAGGA
TTTTGATCAACAGCCTTACTAGCATTTCTTGGATCACCTTCAGCATCTTTTCTGAAACTG
ACATTATCATCACTAGGTTTATTTGCCTTGAAACGCTCTGCTTCTGCATCAGTCTGCACA
TTAAGATTCGACTGACTTTGCAATTAAGACAGACGAGAGAAAGAACAATTACCCTGTTGC
TCTCTGCATAAGCTGTGCTACGGGCAAATTTTCTTAGAATATAACAAAATAGTCGACCGC
CTTCTGGCCTTCCAAAGTTCCAAGTCAAACAACTATTTAAACTGTCAATCGGCACATAAC
CAGTCAATATAAGGGGCGAAAAATCATATAATGGCACCAGTAAAATCAAAGATCACATAT
GACAATAACGATAGCTTGCAGACTATCACCAATATGATGCCTGCTAAAATACCACAGTAG
GTTACTAAAATGCAAGTAGAAAGATGCAAAACACTTTGGACCAATAGGTTGTTGGCTCAG
TACTTCAGTAGTTAGTGTTGGAGATAGTTTGGCCGGCTCCAAGAGGTTTGACGGGGCCGT
CTCATCGGAGAATGCTGCGGACCTGAGTGATCCGCCAATCCGCGGCCTCGGGCATGTACG
GAGGCAATCTAAGGCCCAGTGCAAAGGCAAAGATGTTGATGCTCCAACAACATCAACATC
AACTCTGAGGGTGTAACTTGAATCTGAAAATTGCTACATGTTATGACTCCAATAATCAGG
CCTTCATCTTTGAGGGAAAGACTTTCAGATGACTATGGAAGATGTCGAGCATATCATGGT
GTGCCTGCATTGGGCGAAGAGTTTTTTCCATGTAGTCAAGCATCTGTACTATACGAAGAG
CTGAAGGTCCTAGTAGAAATAAAATCACTTTGAAAGGGCTTGCTAAAAAAATAGAAAACA
ACAAGGAGTCAACTTTCATCCGCTCCTATGTGTCCAACAACACAAAGGCACGTCAACACG
AAATACCTAGGACTGGTAGCAGCATACAAGAATGACGATGTTAAATTTTACATTCCTCGC
TCTTAGTCATCTGATGGCCAGCATCACCAAGTTTAAAGATGGAAGCTCGTATGGAGGGGA
ACCTTCCATTGCTGCAGGTTAGAAAAGGCTATAACTCTGACGTTTTGTTGTATGATAAAT
TTTTGGATATTTTTGCTAATTCCAATTGTTGATGATGTAGCCATGGTATTGGGACAAGGT
CTGAGCATATGAATTTAACGACACAATTGATTAAAGTCAACAGTCGCACGGTACGTGCTG
TCAAACACAACACCACCAAAGGCATCATAGTCCAACCGAGACTGCGCGTCTGACCAAAAG
AGGTTCTGCGGATGTCTTTCGCAGTCTTGTGTTGTACCTGTACCAAAATTCAGAATCTCT
CTATTCCTGCGCTGCCGTATAGTTCAGCATGTATTGGGCATCAAAACCTTCGATCCTTTG
CTTCTTGTACTCGGAGACAAATTTATATAGGTCCGGAGGCACACAACCGAACCGACTTTT
GCATCGAAGAGGGCCACGGGTTGGCTGCGGCGGCAATAGGGCTTGGTGACCAGTCGTAGG
GATGCAGATGTTGGAGGGGCCGACTCAACAAATCAACGGTGGACCTCTGCAAATGCTAGC
CTCTCCGATGAGTAATTTGCACCGTAAAACGACTCGGAACCGACCACCGTAAAAATCGGT
TATTCCTTGGTTTTGCCCTGAATAACACACCATTGATCGTACTAGCACCTTGGTTTTTCT
CAACTTCAGGATGCGGAAGAACTTACTCCCTCCGTCTCAAAATTCTTGTTTTATGTTTGT
ATAGATATGAATGTATCTAGTCATGTATTTAGTATTTAGATACATCTATTTTTAGACAAA
CATAAAACAAGAATTTTGAGACAAAGGGAGTACATGAGAAAGCTGAAGCAGGTCAGAAGC
GAGCAGCAGATAAATCGTAGCTTCAGGAGCAGTGCAAATGATGAATGGCTTCGAGCTATT
CCCCCATGAACCCTGCGTGTTTTTTGTTTTTTATAAGCTCTTCACCCTCCAGCATCTGAA
CCATGGGTCAGGGTGTTTCATGTTTGACAGCCACATATTCACATTTGTTGAGATGGTCAA
ATTTGTGGGGGTTTTTAGGCGCCCAGCTGAATCATTCCCGGTAAAGAAGAATCAAAGTTC
CTTACAAGCCAAGAAGATAAAAAAACAACTACACAAGCCATGGGAAAAGGACACGCCTTC
GTTTTTGTAGCGCAAAATTTTTGGACTGAAGAATACAAATTCAGCCAAACCCATGGTGGT
TACCAATCCAATCTCAGGCAAATCCAACACGTGTTCGTTTGAATTTGATTCTAAAATCAA
ATAAATAAAATCAGAAAAAGACAAGGTTTAAGCTTTCACAGCCTGACAGAGACCTGAAAA
AAAGTCGCTTCCTTTCATCTTACGAATGATTACCAGCTACATAAATCCATGGAATACATG
AAGGTTGCGAATACATGAGGAACAGTCCTGAATCCCAAGGTCAAAACAAAAAGGCACCGT
GCTCGGCGGTTCTCTCTAAATACATGTCCGACGTCTCTACCAGCAATTACAGCTCCAAAA
ACTATGAATAAAACCGCATTTGGAACGAGATGGTTGCACAAAAAAATTGATCTACGATAT
GAAAGTGGGGGTTGATTGGCCGAGGATTCATCGCACGCTTTGTTGGGTGCCACCCTGAAT
TTGTTCTGCTCATGTCACTCTTTCATAGGTGCCGCCAATCTGCATGTGAAGCCATTCTGA
AGCCGGCGAGCCCTGGGCGTACTCTCTTGGTGTTTGTGGGTCAAATGTAAGCCCTGGAGC
TGTGTTGTATGTCGGCGCAGCAAACTGCACGTGAGAAGAACAAAAGGTAAACCTTCTGGA
GCTAAGATATACTCCCTCTGTACCAACTAGACTAGTTCTCCCCAACTACAAGTATTTAGG
TACAGAGGGAGTATTTTGCTGTACACAAACGTGCCAATATAGCATTGGAATATATTGCCA
GGAGACGAAACATGAAGTAATATATTGGTGACACAGTTTGAGAAATTAATGAAACGCTGA
AGCTAAGATATTTTTCCTTGTAACAGTTATCTTGTTATACTTAGCCATTGAGTTCACGAC
TTGACTTACATCTTTAGTTGGAAATGTTTCAACTCCGTTGTGAGCATGGGCATGGGCATT
AACCGCCTCGAGCTTCATGGACAGGAACTGCAGATGACAGCACTTGTCAACCTATTATTA
ACTGCACTATAGAGGGCAACACAATTCCATAGAAGCGACAATCTGTGACACATACCTCAA
TTTGACGTTCCAAAGCTTGGACATAGTTGATTATCTCATCGAGGACTGATGCTTTGCCAA
TAACCTAACCAAGGACGCATAAGCTTTCCAAAGAAAATCATTTACAGACACAAAACTAGG
GAGGACTAAGAGCTTGAAGATGATACAAAGGTAAATGTATATGGCCATTAGTGGGACAGA
ATGGGAACATAAAAAAAATTGAAAGCTTGTTGATGAGATTAAAATGCACCTTATTACATC
CAGGGACAAGATCTTGCAGAATTTTCATCCGCTCGGTTATTTTCTCACGTCGTGCCTGTC
AAAGAGAACTTTCAGTGACCATATTTGGAGCCCCTTTAATGGGCAGTGTGAATGTGTATC
TATGGGGTGTATAAGAATACTCAAAACTGAAAACAATACATTCGGAATAGTCAAAACTGA
AAACAATGCATTGAACTGACCCTTTCTGCAAGGCTATGGCTGTCAGTTGCTTGACCCCTT
CTTGCCCTCACATGGATGAAATCTTGTTTTGGTGGCGGAGGATTTTGGTCAACAGCCTTA
CTAGCATTTCTTGAATCAGCTTCAGCATCTTTTCTGAAACTGCCATTATCATCACTGGAT
TTATTGGCTTTGAAACGCTTTGCTTCTGCATCAGTCTGCACATTAAGATTCCAGTGAATT
AGCGAATAGCAATTAGGACAGACGAGAGAAAGAACGACTAGTCTCTTGCTCTCTGCATAA
GCTGGGCATACCAAACTATGGGCATCTTTTCTATACAATATAACAAAACATAATTGTTAA
CTGCCTTCTGGCCTCACAAGTCAAACAACTATTTAAACTGTCAATAAACACATAACTAGT
CAACATAGGGGGGGGGGGGCAAAATCATATAATGGCACCAGTAAAATTAAAGATCACATG
TGACAATAACACTGGCTTGCAGACTATTGCCAATAGATGCCTGCTAAAATATCACAGTAG
GTTACTGAATGCAGGTAGAAGATGCAAAACATTCTGGACCAATAGGTTGTTGGCTCAGTA
CATTAGTAGTTAGTGCTGGAGATAGTTGATTGGATATAATTGTTTGTCCATCAACCACCT
TTAACCAGCAAGTACATACCAAAAAGTATTGCATTAAAACCGGAGGTACCTAAGACAGAG
AACTCTAAAACAAATACTCAAACCAGCTGTCACCCAAAAAACTTGGTCATGGTATATATA
TTCAACATGCATACTGTTTGTGTAGACAAAAATAACAATGGGGAAATGTTACAAAATAGT
GGATGGTTTTATTTTCTAAGTTACTAACACAGCACCCAGATAACAGGGATACCAATATGA
CTATATTACAGGTTTACAGTGCCAGCAAGATTTCAGCAGTAGAATAGAGCTGACAGTAAG
CTGTAGCTACATAAAGAGTATGTTGGACAGTCGAAGTTTTATGGCAAATTCACATCTACT
AGTGGTTCAGTAACTTATTCCCCTTGTGACTAGGGATAAAAAGATTGGCAGAATTTGTGC
AAAGATAAACTAGTCTTGTTAACTTGAATACTGAGCAGAGCAATCATACACTGTCAACAT
CAGTGAGCCAAGCCTGACAGGCATTAGCAGTTTAGCACTGATATGGACCAATCTAGAGTA
CGTACACAGATCACTGTTCAGTACCAAGTTATGACACCTACTTATTATATACATCATTTC
AGTTGACAGAAGTTGAGCTGTGAAAGCCACTAGAGGATGTCTTTGACAAAAGTACTCCCT
CCGTTTCTTTACTCCGGACGTAAGATTTGTCTTAAGTTAAACTTAGTAAAGTTTCATCCG
CAAAAAAAAACTTCATAAAGTTTGACCAAATTTATATTTAAAACTACCAACATCCACAAC
ACTAAAGATCTAGTACGATATGAAAATTATTTCCATGATGCACCTAATGGTATTGAATTG
ATATTGTGAATGTTGATATTTTTTCCTAATTTTCGTCAAACTTTGCAAAGTTTGATTTGA
GACAAAACTTACATGGAGAGTATAAAGACGGAGTGAGTAGAATCTAGGCCAACACCGTGG
ATATAATAAAGCTGTGGCTAGCTAAAAATAGGAAAACTAGCACTGTGATCAACAGTGTGT
TATTACTACAATAATGATGAAAGGTAGCTACAGAGTAATGGTGCCTTTCAGACACCTGGA
AATGAGTCTTGTCTACACTCAAACTTAAACACCACTTATGATACCTACTCCCAAGGCATT
TGGATTTGTTAATTAGGGAGATCGATAATGTTAACCTTCCAGTACTTCTAGAGAATGTTC
TAGTAAATTATGAACCAGCATCCCAAGTCTAGTTACATTCAGGCATCCTCACACGGCAAA
TGCTAGCTGCAGCCAACAAACCGTATATAGTACAGTTACCAAACCAATCCAAGCTTACCA
AAACGGTCATGCTACTAACTTACAAGAACCACAACTACGCCGAATCGAGCACATGAGCAG
ATCACCGACACCGCCAAGCTGACTGGTGTCCGAAGCGGCCACTCTCAAGAGTCTCAGTTG
CAGCAAGCAGCAG