Contig Data
morexGenes
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Map Locations of contig_42470 (5276 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42470

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58234 1 1449 bp MLOC_58234.1 Available Available LOC_Os04g55760.1, FRAME:+2, EVALUE:0.0, 13104.m05786 protein OsWAK55 - OsWAK receptor-like protein kinase
MLOC_58235 1 323 bp MLOC_58235.1 Available Available None





CDS Structure of MLOC_58234






CDS Structure of MLOC_58235






Contig Sequence (5276 bp)

>contig_42470 5276 assembly3_WGSMorex_rbca.fasta
ATCGATTGATGTAGAGGCCGGGGTTCTTTACCTCCTTTTCCAAAAGAAAAAACAACATCT
AGATGTGTTCGAGACACCCCTTATTCTAATACAACTCTCTCCGTCCCAAAATAAAAGACT
TGGTTTTAGTAAAGTGGTTCCATTGCTTCCTCGAGACTCGAGAGAGTATTTCTTTTTCTC
CTCCCTTTTAATTTTTTGATTTTGTAATGTACCATGAATTTTAGTATTTGTGTTAATCTT
ATTGAGGCTTCAACTGCATTTGAAACTTACTTGATAAACATCAGTACATTTTTTATTTAT
AACGTCACCCTGGTTTTGAGCTTTTCTTTTCCTCCCCCTTCTAGATATCGATGAGTGCCA
ACAGCCGGTTTATCCATGCGTGCATGCGACCTGCATTAATATGCCGGGTACATACCGATG
TGCAACAAAGAAACGTATCATCAGCCTCCCAGGTACAAATACAACTCATTTCCTTGGTAT
AAAGAGTTTCTCTAGTCTAAATTAATTTAAGTTTTGGTTCGACTTAAGTCAAACTTGTTT
AAGTTGACCAAGTCTATCGAAAAATGTACCGATATTTTTATGTTGCACATCCATGTACTA
CCTCCGTCACGGTTAAATTTACGTGCATTTTCATAATAGATAAGGTTTAAGACGCATTGC
ATTTACTCCTAGCATCTAATTAGTAGTACGTTGTACTATTTTTATATGCATGCGTAGTGT
GAATGCTATTTTTAAACTCATTTCACAGTCAATCAATAACCACCTTGATTATAAAGAATT
TTCATGCACGTCTTCTAAACCATGACGAAGGGAGTACATGTTTGCGTACGCATGATCAAA
CTTAAATGTGTCGCCATCGGAGAAGCATAAAACTTCAATTAATTAGCTGTTAATCTCTTA
TATAATACTCCCTAGATCTCAAAATAAGTGTCACGGAGGAATACTTCTACTGCATCTTTT
GATTTTAAAATCAGTTTTCCTACTATTTGAAAATTGAAATCATCAGTCGGTTGACCATTC
AAAAAGAAAGACAAAATGGAATAATATAAATAAATAAAAGTGTTGTAGGAATAATCAATA
ATGCCGTGGGTTCCTACTTAGAACATCTTTAGCAGACCCCATATAACGTCGATCCATAAA
ACGCGTTTACAGTTCACGGAAAAATGGTTTTACAGGCCGGCACGGGCAAGGCCAAAGTAA
GACCCTGCAAAATGAACGTGTAAAAAAGATATTGGTAAAAGAGCATGTTTTACGAGGCGG
ATCGAACTGAGGCGGAATAGACCCCTTAAACTTAAAATGTGAATTGAATTTTCGCTTACA
TTTTTTCTTAGATCTTCTTCTTCCTCTCGTCCGTGCTCATGGTCAACTAAATTTATTTCT
AAATACGAAGTAGCTCCTTCTTCTACGAATCCATCCAGAAACTAGCTAGCTCCGGTGTTC
ACGAATCCATCCAGAGCAAGCTAGCTAGCTCCGGTCGTGGAATCGATCCAGGAGCCCGGA
GCTTCCGTCGCCAACGCCGAATCCGGCCAGGACGAGCAGGCCGGCCGTCAGGACGGGCAG
GGCCGCGTCAGGGGACGGGTGGTCGGCGTTCGGGGACGTCCGGGTGACATCCAGAATGGC
GTACGGTGGATGTGGACATCGGATGCAGAAGTTTCCGTGGCAGTTGGAATTCCGTCAACC
TGATCGGATAACTTTTTGCAGATTGAAAGGAGCTTTTTATCATGCCCCGCAAAAATATTT
ACAGGTCAGACTTATTTGCAGGGTCTGATCGAATAACTTTTTTTATGTGACCTGTATTAT
AAGAATTATTTTACGGATCGGAGCATTATACGAGATCTGCTAGAGATGCTTTTAGCCCGA
CAAAACACACTCTAAGTTGATTATCGAGAAACAACCAAGTGAACACAAGCCAAGCCTTGG
TCGATTACTGATAATGGAAAAAGAGCTTGGGAAGGGCACCGAGGAGCCCGTCCGACTTGG
GGCCCGTGACCAAACCTCTCTTGACAACTTCCTAGACTAGTTGAAGACATCACGTGTTAA
TCTTGTCGGTGTATAACGACCTTTGCCATACAGCTGTTGAACACCTTCTTAATTAAATAA
TGGATGTGTCTAGATCACATCTAGATGTAGATGTGACATAGTTATTACACATTTAAACAA
CTAAATCAAGCATAAAAAAAATACCCACATGAATTTTCACGTAAGATCAATAATATATGA
CTTAGATGTGCAATACTTTCTCACATCTAGATGTATTTTAGCAAAACCGTCAAATATCCA
TTGTTCTTGCCTTACCAAACACATCCAGGATAATCTTGATTACAAACAGTTTGCTAAAGA
CACCCCTAATCACACCTTCTTTACTGCAAGAACAAATAAACAAAAGAAATAATGACTATT
ATGTGCTTAACTAGTAAACCATGTGATCACTCCTAAAATATTGTTTGTTACTCCCTATAT
GTTTGCTCTGTTAAATATTCCAAAAAATTCATTGACATAGTATTGTTGAGCAGTCTCAAA
CTTCCATTTCAAATTTTTAGATGTGTGTGTCATATTATGTACTATCAAACCTCACTCCCA
TTCTCTGCAGGTTTAATTACCATAATTGCAATAAGTGCTGGTTTTGGGTTACTGTTTTCA
CTTTTGGGTGTTGCCAAAATCACTAATAAACTCAAGCAACGCAGAGCCAAAAAGTTGAGA
CAAAGATTCTTCAAGAAAAATCATGGATTGCTTCTACAACAGTTAATCTCTTCAAACAAC
GATATGGCTGAAAGAACAAGAATTTTTAGCTTGGAAGAACTGGAGCAAGCAACCAACAAA
TTTGATCATAATCGCATCCTTGGTGGCGGTGGCCATGGCACGGTGTACAAAGGCATCTTA
TCTGATCAACGTATTGTGGCCATCAAGAAGGCCAAAATTATTGTACAAAGGGAAATCGAC
CAGTTCATCAACGAGGTTGTCATACTTTCACAGACAAACCATAGGAATGTGGTGAAGCTT
TTGGGTTGCTGCCTCGAGACAGAAGTTCCTCTACTTGTTTACGAATTCATATCAAATGGA
GCTCTTTCATTTCATCTCCATGGCCAAAGTGAGAACCCATTATCATGGAAAGATAGGTTG
AGGATTGCACTAGAAACTGCAAGGGCCATTGCATATCTACACTCTGCTGCTTCAATATCA
GTATACCATAGAGATATCAAATGTGCAAATATACTACTTACTGATACCTTAACATCAAAA
GTATCAGATTTTGGAGCTTCAAGGTCTATTGCAATAGATGAGACAGGAATACTTACAGTT
GTCCAAGGAACCTATGGTTACCTTGATCCTGAATACTACTACACTAGTCGACTCACGGAG
AAAAGCGATGTTTACAGCTTTGGTGTCATCCTAGCAGAGCTACTCACAAGGGTGACACCA
GTTTTTTCTTCTCATTCATCAGAAGGGACAAGCCTAGCATCACATTTTGTATCGCATATA
AGAAACAACCAATTTTCAGATATTCTAGATGCACAAATTGTTGAGGAGGGAGGGGCTGAA
GATGCTGAGGTGGTTGCAAGACTCGCAGAAGCATGCTTAAGTTTAAAAGGTGAAGAAAGG
CCTACAATGAGACAAGTGGAGACAGTACTTGAAGATGTTCATAACTCAACAGTCAATATT
AGTTCTCAGATCACAAGAGTGAACCGAAATGCTATAAATGATCAGCCATACAAGGGAAAT
AAAGGGGGAGAAGAAACTAGACTGTACAGCTTGGAAAAGGAGTTTATCGAGTCATCTGAA
ATTCCAAGATGATTTTACTTACATGGTGAAGAGTTACATTTGCTATTATTTATTAGTTTG
GGTATCAATTTGGAACTCTGAATTATAACGTGTATGTAGTTGATATATTAATGGGTCATG
TATAACTCAATATGTGAAAGTAAATAGAATGATTCCGGGTACAACATTTACATTTGAAAT
ATCTACTACCTCTGTAAACTAATATAAGATCGTTTAGATTACTATTTTAGTGATCTAAAC
GATCTTATATTAGTTTACGAAGGGAGTAGTTCTTAACATAAAGTTTCAAAAGCTTGCGAT
AATTTATGTTGACACGTATCCATGAATGTGAATGTAAATACTTCGCATCCAAATGCTGAA
TTTGTGTCACAGAGACTTGATGAGCGATGGATATTAGCTACTCCCTCCATCACGGTTTAG
AAGGCACAGTTAGACTTGCGTGCGTTTCTAAAATAGATAAAGATTAAGACGCGTTGCATT
TACTCCTAGCAGCTAACTAGTATTCCGTTGTACTATTTCTATTGCATGCGTAGTGTGAAT
GCTATTTTTAACTCATTTCACAGCCAATCAATAACCACCTAGGTCCTAGAGAATTTGCAT
GNNNNNNNNNNAAACCGTGACGGAGGAAGTACTACTCTGGAATGCTTTATTGCTGGTACT
TTCATTAATGAGAACTTGAGAAGGCAAGACAAACTTAGTATTTCCTTGGGAAACCCATAA
TTCGTGGATTTTGATTTATTTGAGGCATGGAAACTAATCTCGCAGAGGTGCTGGTGGTGA
TTTTGATTTATTTGAGAGAAATTAACCTCCCCAAGGGTGGCGTTGCGGAACTGGTAAAGA
AACTTAGGATCGACGTCGCGAGACCAACCGCTCTAGCTAATACCATGTAAAAAATGTGGG
ATGGCTGAATATTATGTTGTTGTTGTTCTAACCCTTGTAGGGGTATATATAGGAGTACAT
GAGGGATAGAGGCTTGGAGTACAAGACAAGTTACATGTGATTGAAACTAATTCTACCTTT
ATCTCCTTATCTCTAACTTAAGACCACATATATTTCTAACAAGAATATCATACGAAAACC
AATATTCAATAAAAACTTCGTGAAAATCATATTTTTATGTGTCAAAAAATCTGAAAAAAA
TATAGGATGTTAAGAGGATGATGTTTTGTTGCCACACAAAATTTCAAGTTGAAACACATT
ACAAGATATGAGCTAAGAAAAAGACAAATTTCAGCCCTGAATAGTAATATTACTATTTGG
CACTGTTCAAAGCTGATTTTATCTTTTTCATAGCTCACGTCTCATAATGTGTTTTAATTT
AAAATTTTGCGTGATTATAAAACATCATCCTCTTAACTTCCTGTATTTTTTTTCAAATTT
TTTCGAAACTTCAATATATTTTTCTTTTGTTGTTTTCGTTGGTTTCCACCGGATGTTGGT
TTTCATACGATATTCTCTCGAATGGGCTCCGCTCAGCCAGAATTTATAGAGAAAAA