Contig Data
morexGenes
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Map Locations of contig_42456 (3747 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42456

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58214 1 182 bp MLOC_58214.1 Available Available None
MLOC_58215 5 1664 bp MLOC_58215.3 Available Available LOC_Os03g64030.1, FRAME:-3, EVALUE:2e-132, 13103.m07108 protein receptor protein kinase, putative, expressed





CDS Structure of MLOC_58214






CDS Structure of MLOC_58215






Contig Sequence (3747 bp)

>contig_42456 3747 assembly3_WGSMorex_rbca.fasta
GCGGCAGGTGACACGCGTCGCCTGACGCGCCTGCCGCCACAAGGGATGAGGGTCCTTTCT
GCAAAACTACGACGCAAGTGGTCCTTTCCGACAATTTCACTCGGCTGGTGGTCCTTTTGG
ACAAAAATTCTTGTGGAGTAGGTTTTGGTCTCGCAGCTACGTAGCTCTAGCGATGATGTC
AGTGTCATCCCCAATAAAAATCCTTCGGCTCTATTTCCGTCTCATTTACGCTTGTTTTGG
GGCATTGCCAAGAAGACCAAGATTTTTCGCACAGCTTTCTTTCTTTCCACTATCCTAAAC
AGGCGCTTGGAGTTGGACTGGTGCTCTTCTTGGACACTGCGATAGACCAAACAAACTCTG
GATTTGCACGAATGGTACTAAGCCAACAAACAGAGTCCAGTACTCACTCTGTTTTTTGTT
ATGTATGTACGGTACGGTGTAGTGCAACTTATCAATCAAGCAGGTTTATGGAAGAAGGCA
AGAAAGGAAAAATTGTATGGTTAAATCTTCTATGATCTCTTTGTGGAAAGAATTTTAATG
TATGTATGACCAGTGAGAATGGTTCTTGCATATATAGGCTTCATAATGCATCCTGTGTGT
ATATGGTCACGTACACAGAGTTCAGCTGCTTCCTTCCTCAACCTCCTCTGTTTGATAGTT
GAACTGACCAGAGAGTACTCTTCGTTTGACTAAGTTCTCCATCAAATCAGATATTAGTCA
TAAGTCGCTAATATCCAACGTAATAAATATATGGTTATTCATCAAGATGAAGAAGAAACA
TCCATCATAAACATACGGATCAAGCTGACTGATATTTTTCAGTGTACATGCATCGCCAGG
CTGAAGCAAACTCATGCTAAAGACGTCAATGGAGTGATCTCTGTACTCACTTGACTTGCA
TACATACACTAGAGTTAGCCAGGTTTACCAAAGGATAAACCAAAATGTGTCTTTTGAAAT
TTTCTACTATACATATGATCTCTATGGGTATTTCATTTCTTTTGAATGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTAGACCTGACAGAATGAATCTTCTGTGTATCGGCAT
CATGTTGCCTGTGTATTGGTATATGGTTATGTGCACGGAGGAGTCCGGTAGCTTTCTTCT
TCAACCTCCCCTGTTTGTTTGATTATACAAGCACAGATGTGTATGGCTCCCTCCAAAGAA
TGATGAAGCAACAAGCAAGTGTAGCAACTTGCAGCCACCATGTTGTGGGTGTTCGAAGAG
GATGTGCATGCCCTAGCACCCCAGAAAAAGGGAAACAAGAGAGGAATAAATATGCTGCTA
TTTGAACTGACCAGAGAATTATAATCTGTAATTGTTTCTTCCCAGTATTGGTAATATTAC
TATGCCAAAGCTTGTTCTGTAATTTTTTTTACAATATTCAATATTTATACATGAATCTAA
AGAATGTCTCTCAATGAAACACAAGCTCGATAAACCAAAATAATAGATAGCTTCTGAGTT
TTGTAACAGATTCAGTCACACATATTATTTCTTTTGATGGTATGATTGGCTTTAAATATG
CACTTTTGACATCGTTTAACCAGGCGTTTCCAACCGCGGTAGCTAATGGCAGGGCATCAT
TCATGCTCTACCGATGCATTATCTCATATTCAGCTCCACTCCACGTGCTAGATGATTTTT
CTTCATACGCATTCAGCCTTTCCAATGCACAATCACCAGCATGCTATAATTCAAAAACCG
CAGTTGGCAAAAACAAGAGCAGCTTCCATTATGGAACTGCAGGACTCCGGTGGTTCTCCA
TACTCATTGATCATGAAGAACTTGTACTGAATTACATTGGCATATTTATACCAATCCAAT
TCATGAATTTTAAGAACGGTGGTGCTCAGCGAAGAGTTCAGAGAGGAAATTAACCAAAGT
AGGGAGCAAATAAATAATGGATCTCTTTAGAGCCACAGGGAGAACTAGTGTTTGAATGTA
CCATAAGTCAAATAGGATTGAGCCAGCATATGTCCCAGCTGGACCTGAGCCTGGGTGTTA
AGATGCAGATGGCCGTCTTGGAATGGCAACCCCATCGCATCGACAAACCTCACATTGCGA
AGTTTTAAGCCCTTCTGAGCTTCCCTTACCACTTCAGTATACTGCCCAAGCCCTGATGCC
AGCCCAACCTGGAATATTGAAAGATCGACGATGATGAGAAGTGAGCACATCAAAATCATT
ACTGTCCATAGGTAGTACTTTATGTATGCAGCTACATCTAATTGCTGAAGTCAAGACAAA
AGACAATGCTCCAAATTTAGATGCTTCCATGTACTCCCTCTTGTACCTAAATACTTGTTG
CTCTGCATTTGAGTTACTCGGCTAACCTCGACGCACCCAATTTGGGAGATGCAAGCTGCA
ACCAAAACAGGACTAAGCTAGATTTGTCCAATTCTTTGACAAACATGCCCACTAACTAAT
CCAGTTCGCTAGGACCAGCTGCACATATAGCGTGGCTTCAGCTGTAGTATGTCCTCTGTC
TACTCTACCCAAATGAATGTTAGGCCAGCTGCTACTACCAACTCTGTTCTACTTGTACGT
ACGTGTGTGCCCACTAACAAAAAAAAGGAGTGGAATGTTCTTTGCTTCTCATGGAATGTA
AGATCTACACCAACCATGCCCAAGTGACAAGTAAAGCTGCTAGCTTTCGTGTCCCTCCAC
TCACACTCAGAATCATTTGATCGCAAGTAAAATCATGCAGATCTAGCAAATTATAAATGA
GTAAACCAAGAAGAATTAATTAATGAAGCAATGGATCGAGATGGCGGACGGAAGGACCTG
GATGAGGAGGAGGTGTGGCATGGCGAAGTCCTGGCGGAGGTCGCGGACGAGCGCGCCCAT
CCGGCGCGCGTACTCGCTGGCGTCGGCCCAGCGCACGGTGTCGCTCTCGCCCTGGTACCA
CAGCACGGCCCCGATCCGGCCGCCGGTCTCGACGGCGACCCTGGCCCGCCGCACCATGTC
GGCGTACAGCTCCGACCCTTTGGCCCACTCGGCCATCCGCGTGCCCCCGACGGCGCAGGG
CACGAGGGCGACGGCGGCGCCGCGGGCCCCGCCGGAGCGGAGCAGGGCGTTGGCGAAGGA
CATCCCGGGGCCGACCCCGCAGGTGCGGTTGCCGTCGATGCCCTGGTGCAGCGGCTCCCT
GGCCTGCTCCCAGCGCAGCGAGGGGGAGAGGCGGAGGACGGAGGCCGAGGGCGCGCAGTC
CGGCGGCACCACGCCGTCCCAGTGCGTGCCGCTCCCCCCGCCGCGGCCGGCCATGTTGGA
CTGCCCCGCGAGGATGAAGATGAGCTTGTTGGACGGGGGCACGTCGGCGGCCGCGTGGTG
GTGCCGCAGCGCGGCGGCGGAGGCGGCGAGGAAGCAGAGGAAAGGGAGCATCTTGGTCGG
TCGGTGGCAACGTTCCTTGGGAGCGGACTGGGGACTGGGGAGGGGGGTTTGAATAAGCGG
CGCGGTTGGTGTCGCTGGTTGGTGGGCCCGCCTCAGACCGGAGTCAACCGGAGTGGGATC
CTGCTGCTGCTAGAGTACGTATTTAATTAATTCAGGCGTGCTGATCGATGCAGCCGATCT
GGGCCCTCCGATCCAGATCCGGTGAACACTGCCTAAGCCCAGATCCAAGCACATGCACAT
TGTTCCCTCTTGAAAAGAACTTTTAGAACAAGTACAATAAGGTACAGTCAGCNNNNNNNN
AGGATTAAAATACTATATTTTTGCTGA