Contig Data
morexGenes
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Map Locations of contig_42386 (5009 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_42386

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_58141 2 1764 bp MLOC_58141.2 Available Available LOC_Os01g65720.1, FRAME:-1, EVALUE:0.0, 13101.m07105 protein expressed protein





CDS Structure of MLOC_58141






Contig Sequence (5009 bp)

>contig_42386 5009 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCGGGTGCAATGTTTTTGCTTGGCTTGTTCTCCAAAATAGGATTTGA
ACTTCGGACCGTTTGCGTCCTCGCGGATGGCCAAACTATGATATGTGCCCTCTTTGTAAC
CAAACCCAGAAAACTGCAGCTCACTTGCTCTTCCTATGCCGCTACACCATGCACATTTGG
AATGGCATCTTTCCCTCGCTTGGCATGCACCACATGAACACGTCTACTTGGGCGACGAGG
GTCTCGATACGAAAATGGTGGAATGGTAACCTGCAGATTCGTGTAGGCTCCCCAAAGGCA
CTTGCTTCCCTCGTGATGCTTATTTCTTAGGAGGTTTGGTCTTTCGTAACTTGGCGGTCC
CCTTCACGGTCATCATCAACAAAATCAGGTGTCTCTTTTAGCTTTGGCGGGAGCGAATCA
TTGGGGTGTTGTGGTATCGCGAAAGTAGCTCTTTTATTTTGCCGCTATGCGATTTATGTC
TTAAACTTTTTTCCTTAATCAATGAAATGGCAAATGTTTTGCCTTGTTTCAAAAAGAACT
TTTTCGGGATCTTTTTTTAACTACTTCCTTAATTTAAAATTACTTGTATGTACATGCGTT
CGACTTGACCCCATGGATTGTACCAGTACAGATCGCGCCAGTTCCTTGCTCTCCTCCCTA
AGCATTACTCCTAGGTTGCATATGCAAATCAAGCATCTTCCATCGATCCAACAAGCGAGC
TGGGATCCCTCCACCTCCGTAACTCTCTCTGCCGAAGTCCCAAGTTGGCCATACTGCTAG
ATCAGACGCAGGCAACCATGGAGCCCAGTCGGGTACGGGTCCCCGTACGAGTACATCTGT
ACATGTACAGTTCTACGCCAGCTTGGCCGGGACGGAATACGACGAGGATTTTGCAGGCCC
GTCCCCTCCGCCGCGGATCAGTACGAGTGCGTCCCTGGCTGTAAGAGTGAAATGTAAGAG
TAAGACAGGAGCACGTGGAGCCGTGTTAATTATGGCGGTACAGCGACCAGATTATGCCAG
CGAACGGTGGCAGATCGCGCCTGCTAATCCATTCGTGCCTGCTGCCGCTCTTCTTCTCTC
TCGCAAGATCCATTCGTGCCGCTGCTCCATTATATACCCACGCGGCGCGGGGCATGCGCT
TGGATCGGAGCTGAGCTGAGCTGATCATTTTTCTTGGACGGGGTTAGAGGTGGTGATCAT
GATGTCGATCCTCTGTGAGAATCACGTCGGGGAGGCAGATGCAGATGCGGCATCTTGGGA
GATGGCAGTGCACACGCATCGCATCGCGTCGCGCCAGCGCCGTGCTCTGCTCTGCTCTGC
ATCGGTCGCCAACCCGGCAACGCAAGGCATGCATCAGATTCAGATGTGCTCGCCAAGGTA
CTACAGCGCCCGTGCCTTGCTTTGCCCGAGTGCCATTGCCGCCTATGGCTACCTCCTAGA
AATGCTATACTAGCAAGTAGGAGTATCAACCAACTGGTAGTATAAACTACGGTGTGTGGC
GCCACAGCCCAGAGACCACATGGTACGGTTTGAGAAGAAGGGCGGGCACGGAACCAAGGG
AGGACGGAAGGAAGGAAGGAATCAGTCCCATCTGCATCCGTGTGATCTGATCCCACGCTG
TAAATCGGCCGGCGGGGCCTGCACTGCGTTGCGTTGCCGGGGCAGATCTCTGCATCTGCG
TGCGATCGGGGGCAGAGAGAACCATCTCGTTGCTGCGCTTTCTGCAGTGCAAATATGCGG
GGTGCAGCGCCTGCGCGCGCTAGGCTCTGACGCCCCTCGACACCGGGAACCACATGCCTG
CCGCTGCAACTTGTGCCGCTAGTTCCTCAAGGCCCAGCTGCAGTACAACTACCACTAGAA
CCTCTGTACTGCCGCTTAAGGCCCACTGCCACAAGAAACACATAAAACCAGTGCCACTAA
CATGCTTTCCTTTTAATAAAACTAACAATTTTGTAAGGAAAAAAGAAAAACAAGTAATTC
CTTCATTCCTAAATATAAGTCTTTTAGAACATTTTACTAGGAAACTACATACAGAACAAA
ATAAATGAATATGTACTCTAAAATATGTCTACATAGTCCCTGTTTCGATACTCTAACCCG
ATTAAAAGTTAGAGTTAGATTCTAACTCCGAACTAACCCTGAACTAACTCTAACCAAAAA
GATGTTTGGATGAGAGGGTTAGATTAACAACAAATGTTCTTTCTCAATCATTTGGCTACT
TTAAACCATATTTCCTGCTGGATTTGGTGTGGCCGGTCCTTGTGTGGACTCCTCCTGCTC
GCAATTGGCATAAACGAACATTTTTTACAAATCAAGCATACAAAACATCATAAAAACTAA
TTTGTCCATACAAATGAGATCTCCCACTTAAACATACAAGTCGTCAATCCAAGCTTCAAA
AAATATTACACTCCGTGAAACAAAGCATAAGCTAACTCATCATGAAAGGTATTCATGTTA
ACATCTTCAACAAGAGGTTCGTCTTCTCGTCATGCAGATGCAGAAGAATCCGGTATTGGG
TTGGGTTACACTTTTCATCTGCATCACAAGCATCGAATTCCCTATCCACAATTCTGCACT
CACGAATGAAATTATGAAGAGCCATACAAACAACAATAATTCTAGTTTGCTTGTCCTCTG
AAAATATTGGCATGTTCAACAAATCCTAAATTTTATCTTCGACACTCCAAATGATCGCTC
AACGACATTCCTAACTTTTGCATGTGCATGGTTGAAGGTTTCTTTCAAACCTTGCGACGG
CAGGCCGTTTTGCCATTGCTGCACATGGTACCTTGTACATTTGTATGATGAAACGTAGCC
TGACCGGTTTGGGTACTCCAAATCGACCACATAATACTTCCCTACATAATGTGAAAGGCA
CACAATGATACTAAGATGAACAAGTGTAATTGGAAAAAAAAAATGTTGCAAGACGGTTCA
ACTAGCAAATGTGTATATAGCAACCCCCTTCTAGCAAGTAAGCCGCCAACAACGGCTTGG
TACCCTTCAGCAGTCATCAGTGTATCATTATACGTTCCTGTTGTACGCTGCTCAATGCAC
AATTCTAACAAGCAAGCACTATTAACATAATTTCATTGGGCTTGAATCCTTTGGGCTCAC
CGAGGGACCTACGAAGCTTGCTAACTCTTCAATATCGTCCTCCAATTCTTCATCATTATT
GTCAAAGGGAGCGGAGTCGGATGCTTGCCCACGGACGGCAAGCAACCATGGTATGCTGGT
GTCGCGGCCGCCGAGTTGACGCGTTGCCGAACGCCACCGCCTGCCCCTGTCGACGACCCA
CCGAAGAACACGCCATTGTTTCCTCCTCCGCGACCGGCTGCCGTCGACGAGGAGCCGCCG
AAGTTCAGTTGCCGGGCCAAGGGTGGCGACGAGGAGCCGCCGAAGTTCAGTTGCCTTTTG
ATAAAACTAACCATTTTGTAAAGGGAAAAAGAAAAACAGGTACTCTTTTGTGCTTTCCTG
AAGTTTGGGGCGCTCATCTTTTTTGGTAAAAAAATAAAAACTAAGTTCGCACATGTTGGG
ACTCTTTTGGTCTAGCGGTTTGACTGGCATTTCCGTAAGACGTCTTTTGCAGACAACAGT
TCCCAATTTGACACGTGTGCTGATGCGCACGCTCAGCAGCTGAACCGGAGCGTGTCGGTG
TTTGATTTCTTGCTTTATCTATCTATATATAGGAGTATATATATACGTATATGTCCGGCA
AGATTCAGACCAGGAAGCATCAGTGCCGCACTACGCCAATCAGCTAAAAGAGCCCAACCT
GGCAACAAAACACGGCTTGTTTGCCGGAAAAAATCATTTCCCAACACGGCCCAACTGGAC
CGTGTTTGGATGTTCCGCCGCGGCAAAGCTCCAACACAGATCTCAAATTTCATGACCCGA
TTCCATCGTATATTCGTATATCTACTTTTCAGACTGCTCTTCTCTTCTTCTTGCCTAAAA
AGGCATTCAGGTAGCAGTATGCCTCTTCCCCCAACCTTCAGGGAGGCGCCATTTCCTGTG
CCAATAAATCGACACCCTCGACCACGACGGGAACCCGAAGCTGTAATCCAACGCCTCATC
CGCCAAACCTCCGATCGACAATGGCAGCCAGACATACCGGGAGTCGCGCAGATCCGACGG
GTTCCACCTGTCTGCCATGAAGATGAATGTGCCAGGCAAGCCAGGGAGCGGGAGCACGAA
CGTGCTCTGAGACAGGAACGTTGTCAGCCGGAGGAAGTGGTTGCCTCCGACGCATGGGTT
CCCTAGCGTCTCCCATGGCCCCATGATCCTGTGCGTGGCATGTGCCAGTGCTGGGTTCGG
AGCCCAGCCTGAGCACCGTGAGGTGATCATGTAGTAGGTTCCTCTGAGCTTGAACACGGC
CGGAGCCTCCCTGAACCGCCTTACCAATATTCTCCTCATCGCCGATGTGACGTTGAGATA
ATCCGTTGTCAATGGACTGACATGAAGCTCGGTGTTGCCGCGAGTGGCATAGAAGATGTA
AGCCATGCCGTCGTCGTCTTTGAAGATGGTCATGTCCCTGCTATCAAATCCATGTGGCCG
GAAACTGTAGAGGTAACTGAAAGGCCCTGTGGGAGATCTGCTGACGGCCACACCGACAGA
TGCTTTAGTGTAGTTGCCGTCGTCGATGTGCATCCACATGACATACTGCCGGGTACGGTC
ATTATATATCACCTTAGGCCTCTCAAGAACCTTTGATATATGAAGGTCGTGTGTGATATT
AGTACGCTCTCCGGGAAGCACGATTCCTTCGTGGGTCCATGACCATAGGTCCTTTGACGA
GTAGCAGCTTACCCCTATAATGTCTATCTGAAAAATTGCAAACAGAAGCAAGTATTAGTG
CACAGCCTACTAAGCAGCAATCAATCACGAACAAACAAGAGGTAATAAAAACCAGTCACG
TCAGAACAGGCTGCTGGAAAAACAAAGACTGCTTAAGGCTGTTATTTTATTACTTCCTCC
GTTCCTCAATATAAGACCTTTTAGAGATT