| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_42383
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_58138 |
1 |
1814 bp |
MLOC_58138.1 |
Available |
Available |
LOC_Os07g36750.1, FRAME:-1, EVALUE:4e-11, 13107.m03772 protein CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed |
CDS Structure of MLOC_58138
Contig Sequence (4483 bp)
>contig_42383 4483 assembly3_WGSMorex_rbca.fasta
CCCTGCGGTATACGATGACTGGCTGCTAGCCCATTCGGTGATCTCCCGTGGCGCTAGTCG
TGCCTGCTTTTGTCCTTTAAAGTTCTCCGTCAGAGTCGAAGCTGCGTTGTGTGGCCGTAG
AACGACGTGTCGTCGATAAGGGGTGCTTTGCCCTGTGTACTTCAGTCTATGGGAGTTGGC
TTGGCCCTTGATGTACCGGTTTTACCCGATTTTTCGTAATTAACTGGACAATTCTCTTCT
CCTTATCTAATATATGACGTTTCAAAAAATATGGTTGTAGTGTTAATTTATTGGACAATA
GACTGTTTAATTTGTATGCATGCTAATGTGGAGTACTGTGCCATTGTTTAGTTATGCAAT
GAATTAGTAGCTTTCTTAGGGAAATGCAATGAAATAGTTTAAATTTGCTCGAATTGACTT
TATGTATAAAAAAATATTTGAAAAATTGAGTATTGGGAAATGGACACAAATTTAGTTCGC
GGAAAATGAATGATAAGATATGAACTATTCTTCTCAACCCATCTAAAAATATTTATTTGC
TTTCATAATTAATTACAACTACTCATCCTATATATACCTAAGAAGTTCATCCCACTATCT
TATTTATCTTAAGATAAAAATATTTAGAAAATTGAGTATTGGGAAATGGACACAAATTTA
GTTCCCGGAAAATGAATGATAAGATAGGAACTATTCTTCTCAACCCGTCTAGAAAATTTA
TTTGCTTTCATAATTAATCACAACAACTCATCCTATATAAACCTAAGAAGTTCATCCCCA
CCATATTATTTATCTTAAGATGCACACATTTCACATCGCTCACACATGTCACCTCACCAA
CTTCACTACTTTTATTTCTTTTGACATGCATGCATGATATCGCTACACATCCCACTTTAT
CAATTTCATTATTTTTATTTCACTCAACATGCATGAGAAATAATACTTAATAATTATTTT
ATAATTACATATAGTCAGATATAGAAACAAATCATATGTATTTTTAATCTACAATCTCAT
ATTGAGATTCAAGGCATCCAAATATCATTAAAATAATTATATCACGACCAATTTTGATGT
GTTCCCGATGCAACGAGGGTGGTATCATGTAGTTACTCCTATATGCCGATACAAAAAAGG
GAGTGATCTGCGCCGGCGCGCGGCCGAAGCTTTGGGTCGACCGCGCGCAGGCCGCACGAT
CCACCAACCCCGCGCGTCCGCACCATTGGATCTTCATGCAACATTTTTTTCCCGATGCAG
CGAAATTCTGATGCGATGCAACATTTTTTTCAACGGTTGTAACAAAAAACAAAATTTATA
GCAAAAAAATATCTACGTGATCGTAGCAAAAAAAAAGCTGATAGTACGTGGTAGCAAAAG
TGAAACGCCGGTTGTAACAAATATTTGCTGACGTGTATGCAACTTTTTTACTAGACGGTT
GCAGCAAAAAATGATGCCGGTTGTAGCAAAAATTAACACGGTTGTAGTAAGAGTAAAAAA
CATCGATTGTAACGAAAAATTCGAAGAACTGAAGTTGCAACCAAACGTATATGCATCTTT
TTTACTTAAGAAATGTAGGAAAAAAATAAGGTTTGCAGCAAATATGACGCTGGTTGCAAC
AATTTAAACGAAAAAAATGTTGCATGTCCAGTCAGTGGACGCGCGCGCTCACGTGCGGCC
GGCGGAACGGTTCGGGCGACGCACCGCCCATACACAAAGGAAACAGCCTGGAGAGCGAAA
AACATTACCTGTAGGTGTTTACGAGCATGCCCTTGACTTTGAACGTGCGGTACAACAGCG
GCCGGCCGCCGTCCTCGCCGCCGCACTCCCGCGACGCCGCCATCTCCTTCTCGTCGGCGG
GCACCCAATGCTTGGCCTTGGCGCCGAACACATGCCGTGCCCCCTCGCTGTCGTCGCTGA
TCGCAAGCAGCGGGTCTGCGAGACCCGCATTGCCGCCGCCACCACCCCTGGCCGCCGGCG
AAACCATTGGCTCTTCCTATTTAGCTTCTATACAGTGTGTGTGTGTGTGTGTGTGTGTGG
CGCACGAAGGCTATGAGAGACGCGACCACTATATAGGGACATGGTACGAGGTGAAGCTAA
GCCCAGCCAGCGGCCACCGACGCAGGGTACGCAGTGCTCGCTTGTCGCTTCGCCATGCCC
TGGGAGCTGGGAGCCCAGGAGGAGTCCAGAGTCGTGGAACTCATGAGGGGCACTGCCTAG
CCGGACCACTGGACAAATGCAACGGGATCCGTACGCGTGTCCAATCGACGCCATTCCCTG
CTAGGAAACAACCTTGCTTGAGGAAAACGTGAGCTACGGTACAAACACCGTGTACGCATC
TGACGGAGACACTTGCTTTGGACAGCCAGGCGTTGGGTATTGACGTCCTATTTGCACTTT
TGTTTTTACCCGAAATACCGTGCAATAATTGTTCTACTTTTCATCTTTTTCATGCAACTC
CCTTCGCCAGCATAACAAATCCTTAATCCTCAAAAAAGAAAGCATAACAAATCCTTAGGA
TGGTAATTTTCATCAACTTTTTTTTGCGATCACGTCAAATCCTTGGAAACACATGGCAAT
TACTCTGCCAACAATGCTACACGTAGGGACATTCACATAAGCATACGGGCTGTCTTCTTA
GTTGATACTCCCTCTGTCTCAAAATATCTGTCTCAATTTTATACTAGCTCTAATACAAAA
TTATATTAAGTTTAAGACATTTATTTTGGGACGGAGGAAGTAGATTTTAATATGATTAGG
GACGACGAAGGGCCCCACCCGAATGAAAATCAGGGGAGAGGTGAAGAGTAGTTTAGAAAG
GATCCGTAAGCTTATGTAGACGTTCGTACGTATAGCATTTTTGTTACTCTGCTGCAGTAC
TAAATTTTTTGACGATCTTTTATACAACATCATAATTTTTGAATTTAGAACATAACAAAT
CCTTATACAACAACGTGAAGAAATTGTCCGTTTCTTCACGTCAATTCTGAAGCGTTCGCT
GATACTGATTTTTATAATAAACAGAAACGTTCATTCGTTCCTATCTCGCCGGGAGAATGA
TCGTCGCTCAGGTTACCCCTTATTTTTTTGTGGATGAACTTTGTATTACTCAAGTGGTAC
GACCATAGTCCGTATTACAAAGATCAATAACCTCTGACAAGTCAGAGTTAAACCAAACTA
CAGTTCTACGCTCAGTTCTAACAAACTTTGCCAAATAATCACTAACATTAGTTTGGGTAT
GAAGAACATGAGTAAATTTAGTTTTACGAAGATTACTAAGAAGCTTGATTTCCTCCACCA
GCGAGGAAAAAACCGATCTATCAGTGGCCATATCATTTATCATTCTCACAGCTTGTAAGA
AATCCAACTCCACATGTATAGGCGGCTCCATTCTTTCAATTGCAATTGATAATCCTTCCA
TGCAAGCACTAAGCTCAGCTTCTAAGGAACTTCTACAGGAGAAAAACACCCTACATGACG
AAAAGATGATCTCACCCGCACTGTCTCGGAGGATCATACCAGCACCCGCACCACCATCAA
CAGACTAGGCTCCAGCCATCGGCAAAGACCAAGGGGCATTACCAGTTGAATTCACACTCA
CACCACGCAAAGTAATATTGTCATATGATATCACGTGCTTCCCATTTATCTGTTCCTCCT
CCAATAGCTTGAGAGTTAAGAGAGAGTCTAAATAACTCACCAAGAATCTTTTGGATACAT
TCATTGGAGGAGGTTCCTTGTTGTGAGTCACCTCATTCCTGTTATGCCATACTGTAACGG
CTAAGATGCGTCCCTTTCCTTATTTNNNNNNNAGGCCTCAAAAGGGGAAAGAGGCACATC
TACACGTTTCGCAAGCAAGATAATCATAGCAATATAAATAACTAAAAGAGTGACAAGTAG
GGCATACACTTGCCATCTGATAAGGTACATAGTCACACAGTCACACATTATTCAAAACAT
GGAATGGTCTGACTACGGACAAAATAAAAGGCAAAAGCTATGATATCCCCATGCTAGTCC
CACGATCACGACCATGACCTCTAGTCCTCAGGATAAGTCACATACAGCCTGTCACTGTCC
TCATCGAACTCCCACTTCAGCTGGCTGTCATCGGGAACTCTTGCGTCTGGAGTACCTGTA
CCTGTGGGTGTTTGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGTCTAACTAAGTTAAATGGGTGAGATAGGTTATGTGTTTGGGTTCGCAGTATCCT
AAGCATATGTGGTAGCTATCCTACGATGAACAGAAATAATATGTGGTGGTCTACGTAAGA
CGGTCGAAGATTAGAATGATCACTAAGTGATCCTGAACACCTACTTACGTCATTCCTAAC
CCCACCATGTTCTCGATCAGAGAAGGAGCTCTGAAGGAGACAATCACGGTTACACACTCA
ATTGGCAAGTTTATTTTGATTTACTTTAAGTTGTCTAGAACCG
