| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_42298
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_58041 |
11 |
2119 bp |
MLOC_58041.1 |
Available |
Available |
LOC_Os03g40670.1, FRAME:+3, EVALUE:0.0, 13103.m04393 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
CDS Structure of MLOC_58041
Contig Sequence (7366 bp)
>contig_42298 7366 assembly3_WGSMorex_rbca.fasta
CGAAGTTATTACGATCACCATGATAGGTCTTCGTNNNNNNNNNNNNNNNNNNNNNNNNCA
TGCGACGTTCCCCAACAGAGACTTCAACCTCATTACGAACCCGCACGATAAAAATAACTC
CAGGGTGTGCCGCCGTTGGATGAACAAATTCCGTCGTATGCTAAACTCCTCCAGCCTCCG
CGAGATTCCGCTAATAGGGCGCAAATTCACCTGGAGTAACGAGCAGGAGGTACCCACTCT
AGTACGCCTAGACCGTGCCTTTTGCAATGTCGATTGGGAAATGATCTTTTCTGCAGCCAA
ACTACTACCTCAGTCCTCGACGATCTCCGACCATTGTCCGCTGCTCCTAATCAATGACAA
CATAGGGACAACCAACAAGCGCTTTCGCTTTGAATCATGCTTGCAGTTTATCCATGGGTT
CAAGGAGGTCGTGGATCAGTCCTGGGCAGCGTGCGCCGGCAACTCTTGCCCACTTACTAG
GCTGGACCACAAGCTGTGGCGATTAAGAAAGGATTTACGATCATGGAGTAAAAACATTGT
TGGTGATTTGCAAAAACAATTCTCGATGGTCAACGAGCTAATTCTGCGTCTAGACCAAGC
GCAAGATACTAGACAGCTATCCACAGATGAAAGCTCCCTCCACGCCAGATTAAAAGCTCG
CACGCTTGGCCTTGCGGTCCTCCTTAAGATTAAGCTGCGGCAATGCAGCAGGGTTCTCTG
GCTCAAGGCGGGTGATGCCAACACAAAAAATTTCCAGCGGAAGGCAAATGCGCGGCACAA
CAAGAATACCATCCATGCACTTCAGGGGCCAGAGGGGCCTATCTCGATAGCCGACGGCAT
GACCGAGCTGGCACGCAACCATTTCACACAATTTTTTGGCTCTCTAAAGCATCGCACGTC
TGCTCTCAACTGGGATGAATTGGACCTTGAGCACGTGGACTTAACCGGCCTGGAACAGGA
TCTTTCGCTTGAAGAGGTCAAGAGTGCCATCAACGCGATCCCGGTAGATAAGGCGCCTGG
ACCAGATGGTTTCTTGGGGGGTTTCTATCGAACATGTTGGGACACGGTAAATATGACATG
TTGGCGACGCTGAATCAACTTTTCCGGATGGACAGCCGTGGTCTTGACAGGGTGAACCAT
GCGCTGTTGGTTCTCATTCCGAAAAGAATGGGGGCCGATGCATTGCAAGACTTCAGGCCG
ATATCGCTTTTGCACAGTGTGATCAAAATCTTCTCGAAGATACTTGCATCGAGACTGGCA
CCGAAGCTTGCCCTGTTGGTGGACCAATGTTAGAGTGCCTTCATTAAATCACGCAACATT
CAAGAAAATTTCCTGCACGTCCAAAACACCGCGAAATTCTTTCATAAATCAAAGAAGCCG
ACCATCCTGCTAAAGTTGGACATTGCAAAGGCCTTCGACTCGGTCTCCTGGGCCTACTTG
CTGGAAATGTTGCAAGCCAGGGTTTCGATCGGCGATGGAGGGAATGGATCTCGATGCTGC
TGCGAACTTCTGCATCACGTGTCATGATTAACGGGCAGATGTCAGAGATCATACTCCATA
GGTGTGGCTTACGGCAAGGAGACCCGTTGTCCCCCTTCCTCTTCATCCTCGCGATGGACC
CCCTTCAGAGGATGTTGTCCATGGCCACAGAGCAACGAGGAGAAGGGTGCCTCGTTGCTC
TTTCTACGTGGACGATGTCGCGTTATTTATGAACCCTTCGGAGAGTGACGCCAGGATGAT
TAAGCTGATTCTCACCTGCTTCGGGACAGCCACCGGTCTTTTCACCAATGCGTCCAAAAG
CTGGCTCTTCCGATTCGCTGTGGTGCCTTGGACCTCACACGCATACTGTCCCATCTTGGG
TTCCCCATCAAGGCATTCCATGTGGTCTATCTTGGAATGCCTCTGTCACTTTGCAACCTC
ACCAAGTTAGAACTGGACCCGTTGGTTTCTAAATTCGGGAACAAAGCGGGCACTTGGAAG
GGCACGCTAATGGCGAAGAGTGGAAGACTGGTTCTGCTTAAAACAGGTATGTTCTCTCTT
GCAATTTACATGATGAGAATCCACAAACTACCTGCCTGGGTGGTAAAGCGTTTGACCGAA
ATCTGTCGCTCCTGGCTATGGAGTGGGGACACGGCATGCACTGGGGGGACTGCAGAGTTG
CATGGAACGTGGTCTGTAGGCCGAAGCGCCTAGGTGGCCTTGGTGTACTTGATCTAGCTA
AATTTGGCAGGGCTCTCAGGCTACGTTGGCTATGGATGGCTTGGAAGCACTCGGAGCGAC
CTTGGGTAAATTCAGCATTGCCATGCTCAAGCGAGGAGAAGGAGCTCTTTGCGATGGCAA
CGAAAATTACAGTGGGAGATGGCAGAGCCACAAACTTTTGGCAAGACCGCTGGCTTGAGG
GATGCAGCCCTAAGGTGATCGCCCCAGCCCTCTTTAGGATTGCAGCAAGGAAAAACCGCA
CCGTTTGGGAAGCCTTAAAGGATGACACATGGCTTCAAGACTTGTCTCAAGGGCTGATGC
ATGACATGCTCGATGAGCTTTCAAAGCTGGCATGTAGGCTGGATCGAGTGGTGCTTCACG
AGGGCCACACTGGCACAATTACCTGGAGATTCTCCCAGGACAAGGCGTACAGTGCGCGTT
CGGCGTACAACATTCAGTTTGAGGGTTCAATTCAAATGGCTGGGTACAATCTGATCTGGC
GTGGATGGGCCCCAGGAAAATGCAGGTTTCTAGTCTGGACGATCATGCTCGATAGGATTC
TGACGGCAGATGCTCTTCTGCGTCACGGATGGGAAAATGATTACTTCTGCCCGCTTTGTG
TTCGGAACTTAAAAACTCCGTCACACCTATTCCTTGACTGCCCATGGTCAAGGAATGTTT
GGAACACCATCGCCTCATTGACAGGCATGCCTTCCCTCTGCCCCGCATCATGGGAGGGAG
AGTCCAAGTTCGAAGTTTTGTTTGAGGGTAGGTACGTGGTCACTCCCAAGGATAGGAAAA
AGGGGTTGCTATCTCTTGTGCACTTGATCACGTGGGAGATTTGGCGAGAGAGGAATATGA
GAGTCTTCCAGCATGAACTCATGACTGCGGAAGGCTTCGAGCGCAAGATTAAAGATGAGA
TTAGGCTTTGGAACATGGCGGGAACAAGGATCCCTTTTGATCCAGGCTGAAATCGCTCGG
TTGTATTTTAGCCTTCTTGCCTTCTTTCTACTTCCCTTTTCTCCTTTGCCTCTGTTTTTT
CGTCCATCCTCGGACGGGCCTCTTGTACTTTGTTTCCCCCTAATCAAGGAATTTGGCATG
CGCTGCCAACATTCAAAAAAAAAAGGGACGGATGGCCATACCGTATTGGCAAAAAAAAAA
AAGTCCATACCCAGCAGCTTCCTCATAGGATGCGGCCCTATGCAACTAGTGAACCCAGCG
GCTTTCATTGACTTGAAATCGTTGACTGACTGACAGCAAACATGTGGACACCCTTGCAAC
CCTGCTGTACGGGGCGACGGACGAGTTGACGACGACTCCGCGATAGGTACGGGACAGCCG
GACACACAATTCCAGCTCCAATCGACTTCATCTCCTTGCGAAAATCAAAGAAGCACCAGA
AAAATGCAGGGTGGAAGCTCACACCATGTCCAAATCCAAATCCCAATAGCCTCGCCACTT
ACAAGACTTTTTTGTTTGCGTCGCTCTCGAAGGAATATTCCGTGCCAGGCCGCCGCTTCT
TAAAGGCTTCTCTGGCTTCGACTCCGACTCCGATAGGTGGTGGTGGAGGCTTTCTCTGAT
AGGAGGAGAAGGAACCAAGGAGGGAGGCATCAGAAGCGCCATGGATTGCCTCTGTAAGTA
CCACACCATGGCTTCCCGTTTCTCTCTCTATCTCTCTCAATAATGCATAGATTTGATGTA
AGTTAGTGCCGATGTATGTTTGTCCCCCACATAATCTCGACTTCATCTGAACTTGATCTC
CGAGTACAACAATTTCATATGGCAAAGATTGATTCTGTATCAAATTGGTTCGTCAGAATC
TTGAGTAGTTTCAAGATCCTGTAAACTGAATGCATTCTCTGACAGGGCACGCCTCCGTCA
TTGCCCTTGTACTCCTATTCCTTGGAGGATCAGATGCCAACCCAGCTGCCCGTCGCCACG
GTCAGCTGGATGTAAACCACAAGAAGCAGCCACTACAGACATCCAGACCTTACAACATTG
CCCACAGGGGTTCCAATGGCGAAATACCCGAAGAGACATCTGCGGCATACTTGGTAGCCA
CTAATTTACTCCTCAATTACTTGCCCTTTCTTCTATGTTCTAGTATAAGATTCAGATGGT
AGTATATTTTAGTACCACGTCAAATTCAACTGTATCAAGTATTGAACCTAACAGTCTTCA
GTACCCGAGAAGACTTACAGAATAAATTTAGGACAGCACATTCACATGCCCACCCATGAT
GAAAGGAGGTGTATGCTGAAGAATATCCCAAAGATTATGCCATGTCCGGATTGTTAGCCT
GTTTTTTGTACTGATGGAGATTCTCTGAAGACTGAAATCCAATATCTTAATGCAAACCTT
TTTTTTTTTTTTTTTTGAAACCAAACCTGAATATATTTGTGCATTGTTTATGGCAGAGGG
CTATCGAGGAAGGTGCAGACTTCATAGAGACTGATATACTTGCATCAAAGGACGGGCATC
TCATATGTTTTCATGATGTAACACTGGAAAACACGACCGACATCGGCAACCGTACTGAGT
TCGCTGCCCGGAAGAGAACCTATGAAGTCCAGGGAGCGAATATGACTGGGTGGTTTGTCG
GTATACGAAACTGTGTCTCGATCTTCTTCTGTAGCTAACTTGCTATTTATAACATTTTTT
TGCTGTGAATCTACTTTTGACTTTTGGAGTTTTTCTTGCTTCCAGTGGATTTTACACTAA
GAGAACTGAAATCACTGAGGGTGAAACAGCGCTATGATTTCAGGGATCAACAGTATAATT
GTATAACTTTTGTCTTCTCTATCTCTCGCTTTTCCATATCGCATTCTGCTTTCTTAAATA
CTTCTCACATGTCATCACTAATGAAACAAAATATAGTATTATTCGGATGCCTTGATCTTT
GTTAATTGCTATTTAAATGTCCTTATAACTATATAGTCCTTTTTTTTCAACTGCTAATAG
TGTTCTCCTACTATATTGCAGGGAAGTACGATATTCTTACATTTGATGAGTTTATCTTGA
TTGCACTTCATGCTGACAGGGTGGTCGGAGTATATCCAGAGATAAAGAGTCCTATTTTCA
TCAACCAGCATGTAGGTGATTTCAACCTGACCAACTCCTGAGAACACTTTGTTTACTTAT
AAGAAATGAACAAACTTTAATGTCTACTGATTTCTTGAATATTTTTCAAAATATGACTAT
TGAGTAAACATGTAGGTCAAGTGGTCAGGTGGCAAGAAGTTTGAGGACAAGTTTGTCGAG
ACGCTTCTCAAGTATGGCTACAAAGGCAAATACATGTCCGAAGATTGGCTCAAGAAGCCG
TTATTCATCCAATCATTTGCTCCAACTTCACTAATTTACATCTCAAACATGACAAATGCT
CCAAAACTGCTTCTAATAGATGAAACCACAGTTCCAACTCAAGATACCAACCAGGTAAGA
TCAGCAGTAAGCGCTACTTTTCTATCCTACCAAGTTCATCACCCGAAAACTCTTAGTTTT
CAAAGATCATTTCTAACCTGCAGTCATACTATGAGATAACTTCGAACGATTATCTCACGT
TCATAAGGAAGTACGTAATTGGGATTGGGCCATGGAAGGATACAATCATTCCCCCCGAGA
ATAACCATTTAGGCCCTGCAACCGATCTCGTGGCACGGGCACATGCTCTGAATCTTCAGG
TGAGCAACACATTTCTCTCTCTTATACATGTACATTTACATATACGTATGACAGTACCAT
GCTGAATCATGATGGCGTTGTAGGTGCATCCATACACATTCAGAAATGAGAACAAATTCT
TGCATTTCAACTTCCATCAAGACCCTTATGCTGAATATGAGTACTGGGTCAGAGAGATCG
GAGTCGACGCGCTGTTCACCGATTTCACCGGCAGCTTGCACAAGTACCAGGAGTGGACAA
CTCCACACCAAAAGAAGGAAAAGAAATGCAGAGGAACTCCTGCATGAGATCGCCAACACT
CTGAATGTTGATGCTCACTAAACCTTAGGCTGCCAAGTCTGTATACCTCCTCCCTTTTGG
AGCTATTTCATTATTGTTAGTACGGAGAAAATGAACCGGTTAATACTAGTACTATTCTAT
GTAATTGCTTCCTAGAAATCACGGGAAGTGCCAACTGTAGAGCATCATGGAGTTCGGAAA
AACTTCATTTAGTGAAAAATTTTGTTCCGTTTCGGTGGAACATGTGACATGTCAACGGTT
TTTAAAATGGATAATTAGGCATGCGCTCTGCATCGTTTTCCTGAGCATAGGCGACGAGGC
GGATGACTGGGTAACCCACACGACAAGGCCAGATGTTTGTTTGGTAGATGACCGGCCGCG
TCGCCAAGGCCAGATCGGTCGCGCCTCCTCACGCCGTGGGGCTTTGCACCATCCCCATGA
CGCAGGAGAGAGGGAGGCCCCCGCCACAACCGCCGGCCCCCGGGGCTATAGGCGTTGGAG
GGACGCATTCCCCTCCTTCACGGAGCTTTCGATGTGGAGACTGCGGTTGCATGGCAGGGA
CACGGGCTCGTCCTTCACCTGGCGAGTGGGGATGCCGACTCCCATTCGTGGATGCGCATT
GAGAATGGTGGCTCCTCCTTCAGGTGCACCGGTGACTGTGGAGTCAGGCCCATCCGACGG
AATGATTGCTCTCTCATGATCTTCATTTTCGTCCTTCAGAGAGGCCTCCATGATGAGATG
GGGCTGCTGCTGCGGCCGCTGGTCCTTCTCACCGTTGGAGTAGCCTACCATCATGGAAGA
CGATGGGCCCAGAGAGCAAGGTCAGTGGCACCAAGATCCACATGAAGAGGAACTTCCACG
GTCTTTGCTTGTCGACACGGAGAACCAAGAATTCGGCATCACCACTAGCCTCGGGGAGGT
GGAAGGGCTTGGGACGGTGACACGGGGAGGGAGGGGGATGGTGCACGGGGAGGGGAGAGT
GTGGCTTTGTGTGTCTCCAATGCACAACTTATCAGAGCATGGTTAATAGTATAGCCAACT
GCTGGCTATAAGTATCTTATAGCCCATCTTATAGCTAGCTTGTACAANNNNNNNNNNNNN
NAGAGTACTACTTTTATCATATATGAACCACCTTTCATTCTCACAAAGCACCNNNNNNNA
CGTGCTAGAGCTAGCTCTTCACGAAGAGCCCGCTTCCTTTCTCTCT
