| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_42242
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57967 |
2 |
685 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_57967
Contig Sequence (7869 bp)
>contig_42242 7869 assembly3_WGSMorex_rbca.fasta
ATACACCATGGGATATCTCCTTGTATATCCCTTGTGACCTCAACCATCACCAGGGTAAAC
ATATAAGGGCTCAAGGCTGACCCTTGGTGCAGTTCTATTTTGTCTTCTTGTGTTTCTTCA
AAAAACAATATGTGGGATTGTTCATCCTGCTGAAGCGATCCACCGTGGAGAGATTCATGA
AGGAAAACATATTGTTGCTTCCCAAGGTTTGTACTTTGTTTTTTTAGTTTGTTATCATTT
GTTGTTTTCACTGTCTTCATCAAAATGTGCTACATTCTAAAACTTATAAAGGTAATACTT
ATGCGATGGCTAAAGAAGGGTGTGTTACTGGAATTTGGAGCATTCAATATATGTTGAGAG
CGGCTGCCACTAGCCTTTTTGGCTGGAGCAAAATAGCTCATGATTCACTATTTCCTACAC
TCATTCTACATGCATCTATTTTTCAGAAACTCTGAATTTCCTGCATGTCTATCATCATGT
TTCCTTCCTATTATTCTTTTTTTCTATGAATCTTTGTTGTATAAATCAAGTAACAATATA
GTCATCATGTTTCCTTCATATTATCTAACCAACCGAAACACCCCATAGCCTATACCACGA
TAGCGAGCTTCTCAGAGCGGCACGTTCCACAACTGACAAAGAACCACAAGGCCGGCCTAG
GCAAGAAAACAATAACCAAAATAACAACTTGCAAGGGAACACCACTCACACAAATGAATG
ATATCAGATGGTTGAGTTTGTTTGGTGATAGCGGTGTGCCACCGACAAAGTTCAGAGTCA
ATGCGCCACCAAGACCAAAGGGCACGACACCGGTGTACCGCCATCAAGGTTGAAGACCAG
CGTGCCGCCAAGGCTACCCCAAGATGTCCACGTAAATGTCATCCGGGCCACCATGTACCG
TAACCCTATTAGAAAGCAGACACCAAAGTTCAAGCATGCCAATGAGCATCAATGGCACAA
ATGAAACACATCAAATACCCATGTTCATGCAGAGGCATCGTCGTGCCACTAGAGAAGCCG
AAAGGCGACACACCACCGATACCAGAGGGTGCTATACCCGATGTTCTATCACCGAAGTCA
AAGGGCAGCGTGTCGCCGAGGCTATCCCAGGACATCCAGGCAAGCTCCAGTGAGTTGCCT
AGGACAAAGGTATGCCGAGTCAAAGCTAAGGTGAGTCCCGAAGCATAACAATCCAAGATG
ATGTCCCCAAGGAGGAAACGATGTAGAGATGTTTACACCTTCTGACTCGGGGAACCCTTG
GTCCGAGACGCGCTTGGGAGACATAGAGGGAACACTGACATAGAGAGGAGCGGCAACACG
AGGCAAGTTGGTGACATTTAATGAGTGATTGTGTGGGCCGTGGGAGCCTCATGGGGGTTG
CACCCGCTGCACCCGCCTCCGGTGGGCTTCGCCCAATGATGTCAGTCATGGAAGAGGGGG
GAGGGACTGGATGAGGGGGGCGATGATGAGGAAACTTGGGTTCTTGACCGAGTTACCTTT
GTGACTCTCTGAGATAACAAGGAGGGGGCTTATGTCCCTTTCCGCTTTATATTGTTGAGA
TCCACCACCAAGGTTGTATTCTTCTTCTACATTTTGAAAAGGAGGTTGAACCACGAGCTC
CACATCGGGTGATGCACAAAATCATATTTATTATATTATTCAACAATGCCTTATACAAGT
TAAAACATCACTCCTTCAGAATCCGCCTTCTATGCGACAAAGTTTGCTCCACCTACAAGG
TTGATGATAATGGTGGTTATTACCAAGGCCACTTGCCCTGAACTCATCCCTACACACATC
ATCTAAAATCGAAGAACCCTTAGCGTACATTGCATGTGCATGCTCCCAAAGTCGTCGTTG
GTGTCTTTCGCGAACCCATCTTCGGAGCTGTGATAAATGAAACGACCTTGTCAGGACTGT
CGTCAATGCCACCATGATGCAGATAGCGCCACCGCCTTGTGCTCGTCCATCATCATGATC
CATCATCGAGACCCCACTACACCATGCCGTCGACACCAACCGCCTTCGACTTCGAAAACC
ACGCCACTCGACCTCGGGACCCCTCAAACCAACACCAGCTCCAAAAAACGATATCCCGAG
AGAAAAAAGATAGAAGGTTGTGTTCTTCTAACTTCACTTTTAACAACGAAAGGATACATG
ACCCTTTGTATGTTCATGAAAATAAAGGACTTGCACCTAAACAGAATTAGCACCTACTAG
TATGGTGTAACGTTCTATCAGGGCATCTCCAGTGTTGACCCTCAAATCGCCCACATACAT
CCGGGTCACGTGGTTTGGACGTGTTTTACCATACAACGCGGTCCTGCATCAGTCCACTGA
GTGGTCTAGATGTGCCTTTCCACGCAAACCGGAGACAAAGTGGGGGGGAGGGTTGCGGGC
GTCCAGACTACTGCCATGCCTGCTTTTGACTGCGCCGGCTCACCCTTAAATTGTCCCTCG
CCCGTGCATGCTTCCCGGCCGAAATGAACATCACCGCTTCATAGCGTCAGTGTCACATTC
ATGCCCGTCCAGAGCGGACATGATCTCTTAGTGTTGTTGGCATTGATGCGGTGCGTCGGC
TGAGAGAGTGCCGCTCACACCGCTTCCCGATGCAGGCAACCGCTCCTTGTTCAAACGACA
CCCCATCAATTCGTTGGCCTACATTAATGGTATGGGGTTGCCAAGAAACCTACTCCGGTG
CAACCCGTCTGTGTGTCTGCCGCCCACCATTAACCACCTGACATAACCCATTGCCACCCG
CCCCACTCTATAACTCCATCACCGGCCTCATCCTTGGTCATCCTCCTCCGGTTCCTTTCT
CCTCAATGCACCATGTCCGCCATGGCCTCCTCATGCTCCAAATCCCTCTAGGACAACCTC
TCATCCGAGAAGAAGAGGGAGATGGCAGACATTGTTGTCGAATGACATGCAGGCACACAG
ATGGGGCCCGATGACGTCCCAATGAAGGACGCGATCAAGGACCAGCCGACGCTACCCTCC
TCGCCGTTGCATGCGAGCATCACCATCGGCATGGCCCATGCCCACTACATGGAAATGTTG
CGGAAGGAGCGGGAGGCCAAGTTCCGGCAGGCGTAGGCCGACCAGCTGGCCTACAACCTC
CATCTCCTTGAGGAGCATTGGTGTGTGGAGGAGCTGCTCACCGCCGGCACATCCACTGTG
TTGGATGTGGACGTGCCCGAGCTGGAGGCGTTGCTCGAGTTCTACCACTCTGTCCATGAG
ATCTGCCGCGACAGTTGGTTGTACCGCCAACATTAGGTGGAGTTAGAAGTCGTCTACTCG
AGTTCGATGAGGCGACGGATGAGGTGTGGGCAAGAGCGACGACGAGGAGGACATCGCCAG
CTCCACCACAGCCGCGCCCCACCGCCACGACCACGAAGCTGATGCGTTCACGGACACTGT
CGGCAGCAAGGAAGAGTAGTGCATGGTAGGTCGCTGCCGCTCGAGTCCAAAGAAGACCAT
CACTCTTTCCCTCCTGCTGAAGCTAAGCTTGGCGGGGTGATCGTCGTCGACGGATTAGCC
ACCCAGACAGCACTGGCGATGGTAGAGCTAGAGAGCGTCGATGCTAAACTGGAGAAGGCA
AAGGCAAGAGACGGAGTATGAGTTCTCGGGGTTCATGGCCGGACATGATGAACGGCCGCC
GACGGTCATTTAGATTGGGTTTAGTTAAAAATTGTCAAAAAGTGTAATGAATTTCGTTCA
ATTTATATAAAAAATGTTCAAAATGTAATGATTTTCGCTTGGCTTATACGAAAATCCGAA
TTGTTTGAATGAATTTCGTCCGGTTTAGTCAAACCTTTTTTGAAATGTATGCGGTTGCGT
TGTATAGCCTGCTCTGGCGTCCCTGTTCGCGGACTAATTTCTGAGTTAATTAGCGGACAA
GAGAGAATTTCTGAGTTAGCAGTACAAAATTGGTCGATTGCGACCGTGTGTGCAGCAGTG
CAGGCGTTTAACGCCGTCACTCAGCTCATTTCAGTGAACCACACGCAAGCCATTTATGAG
TGATCACCACCAGTCCACAACCATACTGAAACCAGAAGCCTCTTGTAACATGCAGGTTAG
ATTTAGATTAGGCAGAACATTATCACGTACGCACCCATCGATGCGTCCAAGACATTTCGT
CCGTCCACCTGCTTCTAGGATACGTCTGTCCGTGTAACACCGCTAAAATGTGCACTGATC
TAATACTGGCCGTTCCTGAGCTGTTCTTCAGTTACGCGTCCACTTCATGGACATTCAGAG
GTTGCATGCCTGCCTGGTGGTGCCAAAGCTAGTAACCACGGACGCCCTGCCCTTGCCAAG
AAGAGCAGAATAACGGGACATCTCGTCTACTCTGTCCCGTTTATAACAAGTAAAAAGGGC
ATCCAACTTGAACATTTGGTGCTAATAATCATGTACGAATAACAAAGCTAGTGTGGCGCA
TCGCTGCCATCTACCATTGATGGAGGATCCGACGCGCACCGATCGATCAGTACGCGAAAC
TGAGTGGGTGAACAGTGCGGCGTCGCTGGGCTATAAATTCAGGCGCCCGCTGCACACCCC
TGCACATCATCCACATCCCCACCTCGGCCTCCTACCACTACCAGTAGCACTCTCCCAGTC
CCAGTGTGACTTGCAAGCTCGATCGCGCAATGGCGGCTCGCGGTGGGAAGGCCCTGGTCC
TGGCCATGCTGATCTCCTTCCTCGCGGTCCAAGGAACGCCGGTGTTTGATTTCGCCGCGT
GCTACTGCCACCTCCACAAGGGGTGCCTATTACACACGCCAGCTAGCAGTACCAAGGAGT
TCCACTGCGTGATGACAAGCCTCGCAACATGTACTGATCGGAGGTGCTCGAAGATCACTC
CTTCCGTGATGCCACTGGCCGATGCTGTCAACACCGGTGAGTTATATCGTTCCCGCGTTA
GAGCTCAGTGTCAGGTGCCTGAGCATGTACTGCATATTATACTAGTATATGTATGTGTGT
TTTCCGAAAGTTTGTTTGTCTGACCTGTGGTTTGCTGCTGAATGCTTACACTTACAGACG
AGGGTAGCATGGCCGTTCCTGCCGGGGGTGCCGATCACGGCGAGTTCAACGTCGCTGAGC
GCAGCATGGCTGCTCCTGCCGAGGGTGCCGATCACAGCCAGTTCAACTTCGCTGAGGGCA
ACATGGCTGCTCCTGCCGGGGGTGCCCATCACGGCGAGTCCAACACCGCTGAAGAGGATG
CAGCTCCATGAGGGCCGCGAGAGGCTGGCTGGAGACTTGGACGACAGACACAGTTTGGCC
ATGCTATAGGCCGAGAAACTCTTTAAAATAAAAGCGTTCTTGTAGTAAAAGTCTGTCATG
CACTGTACAAGATCTCTGGCTGTGGTACTAATAACTATAGATATACATAAATACCAGGGC
CGGGCCTACAGTGGTGTGAAAAGTACGGTCTGCACAGGGCCCAAAATTTTGGAGGGCCCA
ATTTTTCATATAAGCCCAGTACAAAAAAGAAAAAATAAACTTAGCGCTATTAGGCCTTGT
GGCACTGGAGTTGGGCTGAAGACTGGATCGCTACAGCCTAGAGGGGTGGATCGAGCGCAC
TCCTCGACTCCTCATCATGCCGCTACACAGATCAGGATTCCTTACAAGATCGGGATCGGG
CAACTGGCGCAGCAGGGACTCTCGAATCGATCGTGGCCAAGAACTGAAGAATCGTCGCCT
CCTCTCATGGCTCGCACCCTCGTCTCTTCGCCCGCGCCCCGTGCCCCACGCCCTCCGTCT
CGAACTCTCGGTAAGGAGCCGCCAACCAGCCCCGACGAGCAGCCAGCCATGGAGTCCGCC
CTCGTCTCCGGTCTTCTGGCCTCGTCCCTTCTCAATCGTTATTACTCATTAAATCAGTCG
GATCATCGGAATTCGCTGCCTTCCTCCCTTCTCTCTTAAAATTTAAACTCGTTGACATCG
TCTTGTCGGATTGCTCGATGACTGACTCCTCCAGCCTCTAGGTGTTTATCGAGTCTTTCT
TTTCGCTTAACTTCGGTTTCGACTCCTAAGTTTTAATTCCTATTTTCTAATTAATTATTA
GCGAGGATGGGTATGACGTTTTTATATATTCAATATGTAAGACATTATGTTATATAATTA
TAATTTTTCTGTAATATATATATATATATATGTATATAATATAGTAATTCTTTAGTTTAT
TTTTTTATAAAATAGGACCTTATTTTTAAATTTCGCACAGGGTTCTGGATTTTGTAGGCC
CGGCCCTGATAAATACTCAGTACGTACGTACCACGTGCTTGTCATTTTGTTATACACCAC
GGGTGTTGAAAACATGATGAACTGATGATGCACAAAACTCAAGAGGTTACTACTGTGAAT
CCGGCTGCTCTTGTTTCCAGTTTTATTTGTGTGCAATGTTCGCGCGAGCATGTGTTGATA
TCTGGTCAAGCTGTACGTCGTTCGTTCCCGTGTTTCGGTAGGAATACTGGGTGAGGTATA
AACAGAAGCAGCAAATTATCAACGCACATTAGTTCTGTTATATAGTACGTATATCGTATG
GAGAGATGTGCTTCGCTTGCAGTCTCGTCCAAAAGGAATTTTTGGTGCAAGATCATACGG
AGAGACGTTGTTTCTATGATGAGTTATGCTCTTGGCTTTTGGATTGTCCTTTTTTCCTTT
TTCGAGGCAATCTGTTGGATTAGTTCTCTTACTGCTTTTTCGAAGAACCTTTTTCTCTTT
TTAAAAGATATTTCGGAGAACGTTGATGCAGTAAAAGATAAACCCATTTATATGGCCTCT
TCCATCACTTGCAGAGGAAGTATAACATTTGTTCATCTAGTAATCGAACAGTTCTCTCCT
CTCTTACGAATTCTACAATGTCAACCTGATACAAAAAAAATTATATCCCGAATCCTTTCC
TGGTACAGTTTTCAGCACATGCAGGGAGCATCCAGGCACACGATCCATGTGACCGAATAG
TTCATGTTTCCCCGCAGCTCTGAATCTCCACGCATGCATCTTCTTCTTCCTGCCTTGTGC
CACACCACAATATCTACAGCTGCACTTCCTAAAGGCTGCTATACTTCGCTCCGTGCCTCC
TTGCTTCTCGACCTCTGCAGCTCGTGCCAGCAGATGTGATGGTCAGAAACACGTTCTCCT
CCCCTATGGTGTCCTTGATGTACCCTGACAGTACCAGTTTTTCCGACACCTGCAGCCTAG
GATTCGCCAGAGCTATCTGAAGATGAACAAGGGCACAAGATCAAATTCTTAAGATAGGGA
AGTTTTTCTTTTCTTTTGATTGAGGGTTGCTTGGAAAGAGAATGCTTTTTTAACACGGTA
CAATAGCATATTGAATATTGGTCAGGTTGTTAGGCCAGAAAGCCAAAAAGAAATAATTTG
TTTATTGTTTTTATACTATGGTTTTCAATCAAGTTATATTATTTATTTTTCTTCTTCTTT
GATTTTGTTTATTTTATTTTCCCCTTTTTTATCTTCCTTGTTTCTATCTTTATCTTTTTT
AGTTTTAATTACTTGAATATTTTTTGAATACATGAGTTTTTTTGTATAATGCTTTGTATA
TTTTAAAATTATAAGCAATTTAAAAAAAAAATTGTTTTCCTTTGCTCATTTTATTTTAAA
AATTGATCCTTTTTGTTTTAATTTTCTTATTTTATTTTCATTTCCGTTTTCCCTTTTTGT
TTTTTCTATTTATGATCTTCTTGTTCTATTTCTGTTCATAGTGCTTCACAAAAACCTTTC
CTTTCGTTTTCTTTTTCATTTTCCCAGTTTCCAGTGGTGTTGGCTCGTGGGTAGGGTTTG
TCGGGGGATAACCCCGGGGTAGGCTCATCGAGCCTGCTNNNNCATTTCCTGCCCAAAGGG
AATGACCAA
