Contig Data
morexGenes
Links



Map Locations of contig_42156 (4288 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42156

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57860 12 1870 bp AK359952 Available Available None
MLOC_57861 1 922 bp AK249768.1 Not available Available None





CDS Structure of MLOC_57860






CDS Structure of MLOC_57861






Contig Sequence (4288 bp)

>contig_42156 4288 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGATATCAGCGAAGCCTGTGTTAGAAGAAAGTTTAAGCAAGGGG
GACAGACCTTCTTGTCTGTTTTTATTGGCAGACTGACCGACTTGGAGATTATATTCCAAT
CGACAGGCCGGTTTAGTGGGATGGGGTAGAGAGACTAATTGGCGTGCACATGTACCTTTA
AGTAAAGCAGGGGTGGCCTCCCAAACAAATGTCTGCTAGTGTAGTAAGCAGGTAGACCTC
ATGTTAACAGTGACATTTGAATCTGTATTATCCCATTGGATATTTATTATGTCATCCAAT
GACGGCAAAGGCCATTTGCTATGGCATAGCAACAAAGTTAGTTCATCCTTTCCTTTTTCC
CACTCACAGGACTTCTGAGTTGCCAAGCTCAAGTTCCTCCATGATCAGGGCAATGACAAA
ATGACATGCTAAGATATGCTACTAGACTGTGAACAGGATATCAACAGTCTTCAGTGATGA
TGGTATGCAATCTACAGAATCTATGCTGATTGGCCACTTCTTTCTGCAGAACTTGGTGGA
GCTTGAATGCGAAAGCTGGGCGGTCAAGGGTGTGAACATCAAGTATACCACGAGAACCAG
TCGGAAGGGGTTTAAAGCAGGAGCCCTGAAGAAGGGAATGGAATGTGACTATGCCAAGCA
GTGCGAATATGTTGCCATATTTGATGCGGATTTCCAGCCTGAAGCGGACTTCCTTCTCAG
AACAGTCCCATTCTTCGTGCACAATCCACAAGTTGCTCTTGTTCAAGCTCGGTGGTCCTT
TGGTAAGTAGTCCATTTCCCATCAGCTCTGAAGCATTCCTATTTTCGGATACAAGTCTAT
TTAGAAGACAGTTTCATTAGGTCATGAATGAAAACTGAATTACAATTTCTTTCATCCTAT
ATATTTGCACTTGCCATATATACTTCAAATATTTCAGCACATTACACCAGTTCACCACAA
AGAATGTAGTCACCACAAAGAAATGTATACCTCATCCGAAAATTTACGGAAGCACTGTTT
CCAAAACTAAGACGAGGAACTAGTCGCTCTTGTTGTGCAAAAGAAACGTCTATCTACATT
TCATGAACATCTAAAACATGTTTAACTTATCCCTTCTCACCGTTCATGTGGTGCGAGAAA
CGAGGTACAGAAACAATTTCAAGAAATTTGGCTTACAAAATAGTGGTAATGTACCACTCC
ACAAATATGATAGTGTTTTATTTGCTCCGATTGAATTGATCGATTCTTAATTGACAGAAT
TTTGCAGTGAATGACACGATGAGCCTGTTGACACGGGTACAAAAGATGTTCTTTGATTAC
CATTTCAAAGTTGAGCAAGAAGCCGGGTCAGCAACCTTTTCCTTCTTCAGCTTCAATGGT
ACACACCTTTACAACTTACGGATTCTAACATAAATTTAAAAAAAAACTCTAGAACATAGA
TCAGGAAATAAATGATTGTCTTAAGGAATTTCTGTTGTAAACCAAGGAACCGCTGGAGTG
TGGCGTACAGCAGCCATCAAAGAGGCGGGAGGTTGGAAGGACCGCACTACAGTTGAAGAC
ATGGACTTGGCAGTTCGAGCAACCTTGAAGGGTTGGAAATTTATATATGTTGGGGATATC
AGAGTGAGTAGATTTTATGTCACAACAATGTTTTTGAAAGTATATGACAGTTTGATGCAA
TCAATTGATTATGCAAACACAATGCAGGTTAAGAGTGAATTGCCATCCACTTACAAGGCC
TACTGTCGACAGCAATTCCGGTGGTCTTGTGGTGGTGCACATTTATTCCGAAAGGTAGCA
AAAGATATTTTGACTGCCAAGGTAGGGTTCTTTTCTCCATCACTGGCTCTAAAACAAAAT
ATTTAAAGAAAACTGAAATCCATCCCATTGTTGTTTCATTAGGATGTATCTCTTGTCAAG
AAATTCCATATGCTCTATAGCTTCTTCTTGGTTCGGAGAGTTGTGGCCCCTACGGTCGCA
TGTATTCTCTACAATATCATAGTTCCGATATCAGTCATGATACCAGAACTATACCTACCA
GTCTGGGGCATCGCATATATTCCCACGGTACTTTTAGTGGTCACAGCTATTAGACATCCA
AAGTAAGTTTTCTCAAGAAGTGCTTTCAGTTATAATTTGATTACTGTCTCCACATACCAA
AAACGTAATGTCCTTAAAACCCTGTCTGCAGAAATATACACATTCTGCCATTTTGGATTT
TGTTCGAGAGTGTGATGACAATGCATCGCATGAGAGCTGCACTGTCTGGTCTATTCGAAT
TATCGGAGTTTAACGAGTGGGTCGTGACAAAGAAAACAGGGAACAATTTTGAAAATAATG
AAGTTCCCTTGTTACAGAAAACAAGGAAAAGATTAAGAGACAGGTAAACCAACCTCTTAG
TTAAGGTTATGGGCATTCAGACTATAAGATAAACTAAACGCAACTGACATCATCTTTTTT
TCTTGCAGGGTTAATTTCCGCGAGATTTTATTTTCAGCGTTTCTTTTCTTCTGTGCGTCA
TACAACCTTGTATTCCCTGGCAAGACTAGCTACTATTTTAATCTCTATCTCCAAGGACTA
GCATTTGTATTTCTCGGGCTAAACTTCACTGGCACTTGCAGTTGCTGTCAATGACAACAA
CTAAACTGTACCAAGTGCTGTTATACAGTTTCTTTATGAGTGTAAGAGTTTCAAACATTT
CAGATGATAGCATTAGATGCATAACTTTGTTTTTTTAACTAACAACAGTTTCCTTGTCTC
ATACTCTGGTCTCTGGTTGATGATTTCTCTTACAATGTGGTGGTGACGGTAGGGCATGCC
TTGTAATTCAACACCATTTGTCATGTACTTTGCAGGGAATGTAGTGTGTTGAATTTATTT
ATTTTGTGTGTCTGCACTGCTAACAAGCAAAAAAGATAAGTATTTGCTGAGTCAAAATAC
ATCCTTTCTGCTGCCAAATTATACCACAGTAACTTGGGGCTCCAGCCTTATCAAAAGACA
AGAATGCCATAAAATAGCTGTAGAATGGGAAACATGCATTAAGATTGACAGTAAAAACCT
TGGTTACTTGAAGGACAGAAATGTGATGACGCCACTGTTCCCTGGCTTTAGTGTTAAAAG
TTATACTACCTCGAGGTAAGGATTACCGATATATAGTACTAATATCAAAATAGCAAGATT
ATGGCTACCAAAATTTCCAAGGGGGGGGGGGGGGGGGGGGGATCACGTATCGAAGAAAAT
AGCAGGAGAACAATCGCGCAAACTTGGTAACAAGCAGTAAACCACAAACACAAGTCGTTT
TGTCTACGATGACAGTCATGTATAACATCACTGTTTGTATACAAGATAATATCACCACTG
GGAAACTGACTTTTAAGTACAAATACAAAATGGTGTTGACCCAAAGTAGAAATAATTGGA
GTAACGGTCAGTCATAAATGATGATGCCATGCATTCCTCATTGCACTAAAATGAACATTT
CATTGAGATGCAACTTTCGAACCCTTTCGAAAAACTATCCTCAATAACACGAGGGGAGTT
CTGAAGGCAGCCTCTTGAGTTGTGTAAATTCATGTCCTCACGACAATCTGGTGTACTGTT
AAAGAAAGGGGTACCTGCCTCTCGCTCCCAAACCCCATATCTAGTAGGCGTAGAACTTTC
CTTAAGTCGCTTCGACGGGGTAAGTTGGACAGAGTGTCTAAGAGCTTCTGAGAGCTCTAC
GCTCTCTTCACTGGAGTTAAACTGAGTAGGGCATTTCCTCTTTGATCCAGGTAATAGATT
TAGTCCTGTCACACAACATTAGACATATTCAACTAACAAGCACAACAAACTAAATAATAA
ATACAAACAGTAATTCCTTGGAAGAGTACCTCTAAATGTATTGGAAATGCTGCATTGTGA
TTCCATTGCACTGGAGCAGTCACTAGGGCGATAAATTCTATAATTCACAAGGAAACTCAT
GAGAAACATACAAGTAGAATCTTAGAAATAACGTAGTATTCGGAAAGAGCTGAGCATAGA
AGTAAAAGACTTTGGCGAGCCTATTATCATGCAGGATATACTCATCAGCATGCATATACC
CTTGCTTGTTTGGAATTGGTATTCCACATGCACATGCTGGACAAGCTAATCTCTTTCTTA
ACCAGCTTTCAACCTCTTAGGTACTACTCCCTTTGTCCCATAATATAAAGAGCATCAGCA
TGCATATACCCTTGCTTGTTTGGAACTGGTATTCCAGGACAAGCTAATCTCTTTCTTAAC
CGGCTTTCAACCTCTTAGGTACTACTCC