Contig Data
morexGenes
Links



Map Locations of contig_42150 (6067 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_42150

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57850 7 3784 bp AK367512 Available Available None





CDS Structure of MLOC_57850






Contig Sequence (6067 bp)

>contig_42150 6067 assembly3_WGSMorex_rbca.fasta
CCGAATCCATGTTGGCCAGCCCCGGGCCCTCGCCCCCGGCGTCCGCGGTCCCCTCCCCCC
TCGGCCCCCCCGCCTCCTCGCCCGCCTCCGCCCGCTGGCTCTCCGACGAGGCGGCGCCGG
CGGTGAGCGCCGCCGGCCGTGGGGGCGTCAGGACCAGGTCCGCCTACCACTTTCAGCCGG
CCAAGAACTGGCAGAACGGTATGGGAGCCGACGCCCTGTCTCTCGTTTCCTCCGTTGTTT
TTCACGGGCGTGAGCTAACCTGACTCTTTGTGTGCGCGTGTCTGGATCCGTTCACGGTGG
CTTCTTCTTGGCGTGCTGAGCAGATCCCAATGGTACGCCACAGCTACTTTCTTCCTTGCT
TGCCTCCTTGCTGATCCTACCTCATACGCTGGTGGTAATATGGACTTTTAAAACGAAGAA
AAATACACTGGAGATATATAACATATAAGTTCAGAATTTTCTAGAGGGTTTTCCGTGTGA
ACCGGTCGGACCTGGGATTTAGTTGTCCCTGTCGGAGCGTCGCCGTCGGTGAACACCGGA
CGAGTGCTCGTGGGATGGGATGGTGCTCATCCATGGGAAGGGGAGATTCTGAACATGAAC
ATGAGATGGTGGTAGGTTTGTGTGGCCCGCCGAGATATGGTGTCCATGTCGTCCAAGCGT
CTCTGCCGCTTGTGCGTGCGCGTGCTCGTCGCTGGTCGCATGGCCCCCACACCTACCGTA
CGTGGGCAAAATGGTAACCTTTCTTGTTCAGGTTCGGTAGGAGGGGACGACAAGTGGAGT
ATATTGTTTCTATCTCCTGCTCCCGAGTAGTTGGTGACGGCTAAACTTTGGTTGTTCAGT
CGTCAGACAAAAAAACACGGCAACTCGTTCTGTCAAACGAAAATATACTCCTTCCCTCCT
TTTTAAAATAAATTTCTTAACTTTGATATAATTTTAGTATAAAATTATATCAAGCTTAAG
ACATTTATTTTAAAACAAAGGGAGTAGTGCAATATATGTTCTAACAAAACACAAGTATAT
GTTGTCCTCCTCTCGTCAAAATAAGTGTTGTGGTTTTAGTTTATTTGACTTGCAAGTTAA
CCGGTGTGATAAAAGCATGACAAAAAAGTTGATTTGTAGTCCCTTTAGTTTAGTTAGACA
CAAAAGAACATATCAACAAATTTTCGTGGGCAAGTCACGTTTTTTTGCACAATATTTAGT
AGTACCTTTGGCTTCGGAGATGTATTTAGGCTTTTCAGCGACTTTCGGCGTTGGTTTTCC
TAGTCTCTACGTGGAATTATGCTGGTCGTATGAACATCGCCATCAGGGAAGATTGAACTT
ATCCCTAGACCGACCATAGTAGATAACAGGAAAAGGTAGAAGAGATCCTAGCCAAGCCGG
TGCCTGTCTGACATGACAAAACATAGCCACCCACACGTAACGTAAAGCTCCCTCCTCACC
GGCCTGCATCGTTTAGTCATTGCCGTCACAAAACGGCAACGTTTCATTTCTTAATTCAGA
AGAAGGGCAGCTATATATATCATTTTTTTTTCTATCTCCTGGTTTTTTTTTTGCGGGATT
CTATCTCCTGGTATCGACCAAACTTAAACTTTGGTTGTCTGCTGACATTAAAGAAAAACA
TGACAATTTTGACTCGAAAAAACTTTGTGTCTGACAAATCATAGGAAATTTGATCCTTAT
TACACCAGATTAGTAGTACCTGGAATTGTGCTTAGACTCTTGATTTTCCTAGTTTCCTCT
CTGAACCTCTTTAGTTGTACGTGGGAACATCGCCATCAGTGAAGGCCGAACTTATCCACA
GGCCATACAGTGTGTGTGATAGGAAGAGGAGATCAGAAACAATGGTGATGCGTGTGTGGT
CCGCAGGCGAGAGGCAGCTCGGTCGGCGTTGGGTGTCCAAGCAACGTGGATTTATCCTGG
CCGGCGCAACGTCGCCGTCAGTGAACACTCAGCTTATCCACAGACCGACGGACCATAGTA
GATAACACGGAAATGAAGAAGCGACCCTAAACTAGCCGAGGCTTGTGTGGCCGGCGGTTT
GGTGTCTTGTGTCCAAGTGTTTAGTTTGTGAAGATGGCACAGCTACACGACGTGAAGCTT
TAAGCTCCTCACCTGCATCATGATTGATTCAGTCACCACCCTGGACAGACAAAATTGCTG
CGTTTTCTTGCTAAAGTTTAACAAGACATGTGACATCCTAACATGTTGACAAATCAAAGC
ACTTTCTCAACAACAAAAAGGACAGATTAAAGCAAACTTTGCTCATTCAGTCAGACAAGA
TCCAGTAACCGATCTAGAATCATTAGTCTTTTCGTTGTTGTTCGGAAAATCTGGAATCAC
CGGCTGCAGTTCCGGAACAGAGTTTTGCAGCATCTCCTGTATGTAACTTTATGTTTTTGG
TTGCGCGTGCAGGTCCCATGTACCACAACGGATTGTACCACTTCTTCTACCAGTACAACC
CCGACGGCGTGACGTGGGGGAACGGCAACCTGTCGTGGGGACACTCCGTCTCCCTGGACC
TCGTGAACTGGTTCGCGCTCGACACGGCGCTTGAGCCCAGCCGGTCGTTCGACGCCAACG
GCTGCTGGTCAGGCTCCGCCACCATCCTCCCCGACGGCAGCCCCGTCATGCTCTACACCG
GCATCGACGCGCGTGGTGACCAGGTCCAGAACGTCGCCTACCCCAAGAACGCCTCTGACC
CGCTCCTCGTGGAATGGGTGAAGCCCGAGTACAACCCCGTCATCCCTGTCCCAGCTGACA
TCAAGCGCGACGACTTCCGTGACCCTTCCACGGCGTGGCTCGGCGCCGATGGCCAGTGGC
GCATCGCCGTCGCGGCCCGTGTCCATGACGTTGGGGGTGCCACGCTCATCTACCGGAGCA
AGGACTTCCTGCGCTGGGAACGGAATGCTGACCCGCTTTACTTGGCCCACGCCGCCGGCA
TGGTGGAGTGCCCGGACCTGTTCCCGGTGTCCGAGCCCGGAGTGGAGGTGGGGCTTTCGG
CGAGCGGCGCCGGGGCGAGGCACGTGCTGAAGATGAGTGTGATGGACACGGTCCAGGACT
ACTACGTTGTCGGGCGCTACGACGACACGGCGGACACCTTCGTGCCGGAGGACGACGGTG
ACTGCCGGAGCTGGCGCCGCCTCGACTACGGCCACGTGTACGCGTCCAAGTCCTTCTTCG
ACCCGAGCAAGAACCGGCGCGTGCTCTGGGGCTGGGCCAACGAGTCCGACAGCCTGGCCG
ACGACCTCGTCAGGGGATGGTCCGGTGTTCAGGTGCGCCGCCGCCGCCATGCGCACACAG
TGCATCAGTAATTTTTCGATCAGCTGATCATACTCATTAATTGGCTCGTATGATGTCATA
CGCGCAGACTGTTCCGAGGAAGATATGGCTGGACGAAGACGGCAAGCAGCTGCGGCAGTG
GCCGATAGAGGAGATCGAGACGCTGAGGAACAAGCGAGTGAACCTGCTGATACCTGAGGT
CAACGCCGGCGGCGTGAACGAGATCATCGGCATCGTGGGCGCGCAGGCAGACGTGGAGGT
CATGTTCCAGATCCCTGCTCTGGAGCACGCCGACGTCCTGGAGCCCAACTGGCTGCTGAA
CCCGCAGAGCCTGTGCGGCGAGAAGGGCGCGTCGGTGCCGGGCAGCGTCGGCCCGTTCGG
GCTGCTCGTCATGGCCTCCGGCGACATGCAGGAGCACACCGCCGTCTTCTTCCGGGTGTT
CAGGCAGAACGACAAGTACAAGGTGCTCATGTGCACCGACCTCTCGAAGTCGAGCACCAG
AGACGGCGTGTACAAGCCGCCGTACGGGGCCTTCGTGGACATGGACATCGAGGCGCAAGG
GGGCAGCATCTCGCTCAGAACACTGGTAAATTCCTTAAATCTTTTGCTCTGTTTCAGGTA
ACACGAAGTGTAGAAATCGAGCACTAATTACCGCTTGTGATCTCGACGAACAGGTCGACC
ACTCGGTGGTGGAGAGCTTCGGCGGCGGCGGCAGGACGTGCATCACGGCGAGGGTGTACC
CGGACCACGTCGTGAACGGCAACAGCCACCTGTACGTGTTCAACAACGGCACCGGCGCCG
TCAAGGTGTCCAGCCTCGACGCGTGGGAGATGGCGACGGCGACCGTGAACGTGCTCCCCG
ACGGGCTGATCGCGGCGAGCTCGGTGAGCAGAGCTCAAGCCTATTAGGATTCGGGAGCTG
GGTTTTCGCTCGGTGGATGGATGGATGGATGGATGGCCATTGTGAATTTCTACGGCCGAT
TGGATTTGTCTGCCCAATTGTGGCTCAGGTGTACAAATGGAGGCTCCCTCATTGTTTGTC
AGAACAGCACAGAAGAAGGATTCTAGGATGCTGCAAAGGAAAAAGATTGTAGGAAGATTT
GTGTCTAGGTGTTGGAAGGTTTTGATACTGTCAATAATATAGTACTGGGGTAAAGTATAG
CACGCATGCCCTGCATGATGGGCGTTGGCATCAGTTTAGAGTGTATTTCCAAGGTGAAAA
CGGGTGTCATGTAAAAGTATGATATCCGTTGAGTTGTACAAAATAATACTATTCAAATCT
ATAAGGTATATATTGTGTGCCCTGTTCAATCTTTTTTCGTACGCCTCCTATAAGTGGAGC
TGGCTCTAGTATTATCCATAAGCATCTCTAACCGACTTTAGCTAAGGGTGCGGCAGATAG
GTTTCAAATGTATAGGCCCATATTCATGCTCGATGTCCTGTTTATTTTTTTTACCAAAGT
CTTGAATAATAGAGCCATGGTTACTGCTCATAAAACTATTTCCAAGGTGCAATCCCCGTT
CATCAAAGGGCGTTATATTTTAGAAGGTTGACTACATGGCAAGGGGGTTGCTTTCTATGG
GGATAGGATTACTCTTGCTAAAACATGTACGAGTAATATCCCTAGCCATTTACTTTCTCT
TTTTACACTACCTAATGGTGTAGGTAAGAGAATGGATTTTGTCCGTGCACGTTTGGCTTG
ACAAGAGAGGGAGTGGATGAGATAGCATCATTTAGTCAAGTGGTTGGACGTTTGCCAACC
CATGGATAGGGGGGTTTGCGGATTACTAATCTGGAAGTGGTTATGGAGATTAGAGAATGA
GGAAAGGGATTGTCAGGAGATGATTAAAGCCAAATATTTGAGAAGGAAATCTTTGGCATA
ATGTGAATCATCTCCGGGCAATTCACATTTTCAAAATGGCTTACTGAATATAAAGGACAT
CTTCTATTCTTGTTGTCAAACGGTGTGGTGGTAATGGATGCAAGACAAGATTTTGGGAGG
ACACGTGGCTGGGAAAAAACACTTTGTCAACTTTCCCCCCGTTTGTATAACTTAACTTTC
GTGAGCATGTTACAGTTGCTAAGGTCTTCAACCAGAATTTTAATTGTATTACATTCAGGA
GATGTCTTTATGGAGAAACTCTTGCTATTGGAATGAATTACTCGATATGTGTCTCCAAGA
CATTTGGGGGCCGCGTGGCCCCTCCAGGCCGGCTGGCGATAGCCGGCCCATTCGGCCAAC
ACAGGTCCGGTCGACTCGCGATAGCCGGCCCCTTCGACCAACCCAAGACCGGCCGACCTT
CCCCTTTGGCATGTATGTGTCTGGCCGACTGGCGATAGCCGGCCACTTATCCAACGCGCT
CGACCGCCTGGCGGGGCTCAGCCGACCGGCTGGCCTGCCGTCAGCCGGACGGCTGGCTCC
CGTCCCATTCGGACGTACCGTCGTATGAAAGACACGACAAGACGAATGATCAGAGGCTAT
CATGACAACACATAGTATGGTATTTCCCTCTAAGTAATTCGAGCGGCTTGACTTGGCCCA
TGCGCAAACATGTAGTTGATTCAAAACCAATGCAACTTTCATGATATTTAAATTCACAGT
GTCCATATCCTACTCATGCTAATTGTTCAATGATAATTATTCTCAATGCATGATTATGAT
CATTTTCGCTCTCTAGCTGGTTGCTTCTCAATCTATTGCTAGCCTTCACATGTACTAAGC
GGGAATACTGTTTGTGCATCCAAACTCCTAAACCCAAGTTATACCAAATGAGTCCACCAT
ACCTACC