Map Locations of contig_41892 (11002 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57586 7 3135 bp MLOC_57586.2 Available Available LOC_Os08g36994.1, FRAME:-2, EVALUE:0.0, 13108.m03891 protein protein transport protein, putative, expressed





CDS Structure of MLOC_57586






Contig Sequence (11002 bp)

>contig_41892 11002 assembly3_WGSMorex_rbca.fasta
CAGATGATGCGCATGATGCAATGAAGATGCGATAAAAGAAAATAGACACACGACGAAAAC
GGAAAGAAGGAGGAATCTTCTGGAACGTCGGCATCGGGCTGTCACACACGCTTACTACAT
TTTGTTTTTCAAATTTTCTACAAAGAACGATTCATGTCTCATGTCTACAAAGATCTTCAG
GCTTCCTCTTCCACCTCCTATGACAACGACGAACCACTCTCTGTCTTTTCACTGCGTTAT
CATTAGATTGTGTCATCATGGTAGTCTATGTTTACGCCACATTTGGATCTTTACCCATGT
ATATGTTGAACTTGAACCTTATCCATCTTTGAATTTATATTTGTGAGTTTGAATAAATTC
AAATGAAAAGAGGAAAACACAAAAGACAGATGCAAACAATTTCCAAAAGAGTAAACCAGG
CATGCAATGTGTGTCCAGAAAACCAACATTGGTATTGACTAATGAAGGAGAAACAAAAGG
TAATTATGTTATTTCCATCAACCAATAAACGACCACCACATCATCAATTTGTTGCACATT
TTTGCAGCAAACACATGCCACCAACAAACCGAGTAGACGCAGCAAGCACGACACGCTAGT
AACACATGAGACTTAAGAATCCTCTTCACCAGTAAGTTTGAACACCTAGATGATGATGAT
CTCCTTTGGTGTTGGCAATGATCAACCATATGTTGAGCTAACAACACAATTTATGAATGT
CCCGTCTCGGGTTATATGGCATAAACCTTGGTCCATGTCCCATGGCAATGTACAGATGGA
GAGCTAACAACGGTATGTCAGTCTACAGTACTGTAACAGTGATACACACACGAAAAAGTT
TTCTTTGCTGTACATCAGAGAAGAGGCCATTGGTGCAAAATTACTGCACGCCCACGATCT
ACTGAACTGCCAACCGCTGGAGATGCTCCATGAAGACCTGGAAGCTCGCATCATCTGTGA
ATATCATATCCCCCCCGGGGGGCGGAGGATTGTCGGAGTCATATGTCACGGATGGGTTCA
GCTTTGCCAGCAAGAATCGGGCCTGCAATTTCCATAAAATAACGCATTAGAGAACAAATT
ATATGGAAGTGCTGATGTTTTTTTTTAGTTTACTCCGAAACGATCACTGATGACTTGATT
GCAATTCTCGGCACAAATTTTGACCTTCCAGTTCAGGATTGTTGCATTTGTTTGAAATTA
TATCGTATCGGGATCCCCTGCAGTTGCTACTGTCACTGCAGGTTTAGGAACTGCTCCCAA
ATACCACTGCCGAGTACACATGCACCGGATCCATAATCCTAAGAGTGTACTGATAGATTA
TATAGAAAAGAATAACCTGAGAACCATATTGATCGCACACAACCAAACGAGGCACAGGAA
AGCGCTCCTTGATTATTGAATCAGCTTCCTCCTGTGGGGCTTGCAACAACTGGGCAAACA
CCTGGACATCATCATACAAGGTTATACATGATTTTTCAACAACATGCGAGAACCCAAAAG
AGAAGACAGAAAAATGTAAAATATAGAGCATTGATATTTTCTATGAATCCTTTTAATACG
ACATGGTGCTGGAATTTTACACCAAATACAGATAAGTTGTCCATAAACTTACAAGAAAGC
CAACATGGAGTCAAAAAATATATTTAGTGCTATATCATGGTTTCTAGCCGACAAAACATT
ACCTCGTGGCCTTCTTGATGTTGGTAACCAGCCTTTCGCCACTGTGCAATCGTTATCCCA
TGGAATATGACAACGGTAAAATAAGAATCCAACAAAAGTATCCTGTCACCAGCAATTGCG
CTTACATCCAATAGAACAGGCTCAGGACCAGACTGAAATGAATACGATATAAGTGAAGGC
TGGATCATCACAACTGCATTCGCCACATTCTCTCTGTTTAACATCATCCTGAAATATGCA
GTTTCATCTGGACTATTGTTGAAAACCTGCATGTGGTGGTTAATTAGGAGCAAAGAGAAA
TTTAATTCGCTTGATCTGTTGATCCTGAATTAGGACCAAAAAATGCTTTACCTGAATAAA
CTGAGAACGTCTCAAATTAAATATAAACTGTGGAAAAATTGATAGACGTGGGGACAGACT
GAAAGATGAAGGTGCTTCCTTCTGATAGTCTCCAAATTTAGAACATAGACTAATCAATGC
TCGGTCAAGCCATCTTACTGGATCAAAATCAACCTGAAAAGAACAACAAGAACATGCTAT
AAAAATGAATATAAAAGATCTTACATACAGGAAAGAGTCAAAGATGCAAATCATGTCAGA
ACATGTAAGCAGCAGCAATAACTGTGAGCTAATTATTAATGAAACTAATCAAGTAGTCCT
AGAGCAGCGAACTATTTCCTTTATGCTCATGGTTTGTTTCCCATGCAATTTTAAAAAGGT
TTCCTCTTGATGGTTTTATTTCCTTGAACCTTTTAGGAGGATCGAAAGGTCTACATTAGA
TGGCACACTAGCTCGGTGCATTTGAATTATAATGGTTGTGCATCTCCTTTGAACTACCTT
TTCCTATAAAAAAAACAGTCTTAAAAAGTATATGGCACACGTGAACTCTATTTCTCTAGA
ACATTGCAATATATGCTATACCGTATCTTAGAAATGAATTCGATCCTCCCACAGAATGCA
TCTCCAAGGAAATAAACTCGACAAACAAAGAAACTAGCTATTTTAAATTCTAACTCCCAA
CAAACTCTGTGATTCGGCACTCAAGAGGCACATTCAACACCCTAATCATCTTCAAACCAT
ATTGCATGACCATCCTGTGATGGCGGTTCCCGAATGTGAAAAAACACTCAAAACATGTGG
CTCAAGTTAACCTTCATAGATCATTAATACAAGCCAAAGTACTGTAGATGTGCTATCAAG
AAGCAGAAATAGTAAAAAAAAACTAAAAAGCAGAATTGGGCGCCAGACACGGGCAGAGTT
CAATACTGGACATTTGATTGCCATATTGCATGATCGGGCAAGAAAAGGTTTCACCTTTTT
TCCGTCATGCTTGCTTCAACAAATTGAACAAGGAAAAATGGAAGACGCTAAGGAATGTAC
AGGAACTGAATCATAATAAAATAATCAAACTGGACTTCACACTCTTTCTCCAGGAACTGT
AAATTATGCTGCGAATATCTCAACAGGAAAGGAAGGCTGGTGTGTACATATGGCATAAAC
AAGAGATATACAAGCCAGGAATTTTGTGCTTCCAAATTTGTTATGATGTTATATTCCATC
TCTAAAACATAAAAAAATGGGCCTGTCATGGGCCACTAAGTATATTGAAAGAATTTATGA
AAAGTAAACAGGCTATCAGAAAGTACCTCAGCTTCCATCTTAAATGAGACCAAGCGTGCC
ATGACTGCTGCTGCTGCCTCTTGGTCAAAGCCAGTTATTAGCTCCTACAGCATATGTACT
AGTCGAATAAGCAACAGTATTACATTGATTTTTTGAAAAAAAAATCTAATAAGTATGTGC
AAGCACTAAAGCACTGGGTAACACACTGACATTGGCTAAACACAATTGTTCAGCTCAATT
ATTACTGAAAAATGGGTACAAATGGAAGGAGAAAAACATTTAGAAGGAAAGAACACTCAT
CAAGGGGGACAAAGGTAAAACTTACCTGCACACTGCCAGAACCAGCAACCCATCTTCTCG
AAAGTGTAGTCGCTCGCAATCTCATCTGCCCATCATGATGCTGATAACTGCATGTGGCAT
CTCTAAGTCAGACATATATACTTCTCCAACAATATCAATTGTTTATAAAAGAGATGGGAG
GGGGGGGGGAGCAGATTCCATACTAGGTTAAGAACTGGAAGTAGAACAGATTATTTTGTG
ATTGACCAATTGCGTCCGGGGCATCTTTTTTGGCCATATCAAATACTAGGCATAGTGATG
TTTTCCTATCTAGACCACACATCTTCCAAGCGCTAGTGTTCCCCTGACCTACAACTGTAT
CTGAGGATAGAGGGCCTTTCTGCAGAAGCAGCAACATGCCAAAAGACTAAGTATAGCATA
CAATCAACATTCTAAAACATTAACATGTAACTAAGCGCATACTGTACCTTCTCCAGGGAA
GTACAAGGTCCAATGATGCCTTGAACTTTGACATCCTTGGAGCAGTTGATCTCAAATATG
CCACTGCAAAAATAGTTTAAATACAGAAATCAGACAACTCAATAACAAGGCTCTACTACA
GCAGGTTACTGGATGACATGAACGTATTTTACACCCTTGAAACAGTCATTTCACCTAAAA
CAAACCTATGTGGATGATTAGGAAGAATTAACACATACACACACTTTTGCCTCAAGAGGC
ATAGTCAATTAGTACATCCGAGTTCAAAATCACTTAATCAGTACTGGATAGCACTAAACT
TATCTGCAGTTTCTCTGATCACCTTTGAAAATAAGGTAAAAGCAGCAAGTAACAATATCA
CACTTCCGAGGTTTCAGCAAAAACAGACAACAACAAAGCCTTTCAGTCCCAAACANNNNN
NGGTAGGCTAGAGTTGAAACCCATAAGTTCTCGAAACCAATTCATAGTTCTGGCACATGG
ATACCTAACTTCCACGAACCCCTGTACATGCCTAGTTCTTTGGTGATATTCCAGTCCTTC
AGATCTCTCTTTACAGACTCGTCCCATGTCAAGTTTGGTCTACCCTGACCTCTCTTGACA
TTATCAGCGCACTTTAACCGTCCGCTATGCACTGGCGCTTCTGGAGGCCTGCGCTGTGTT
ATGCCCAAACCATCTCAGACGATGTTGGATAAGCTTCTGTTCAATCAGTGCTACCCCAAC
TCTACCACGTATATCATCATTCTGGACCCGATACCCCGATCTTTTTTTTTGTTGCAGCAA
AAAGAGAACTCAAAGCAAATCCCTAATTACATTTGCAGAGAAGACAAGACAAACGTAAAC
ATGCTAGAAGTAGCAAAGTAGCAATGCATCTAAACCAAGCAGGCAGGAAAGTATCTTTAC
TTGAACGATAAGCCAAGGTCACTATCGCTTGACTGAAAAATGCGTCTAAGTGAATCTTTA
AAAACAGAATGGCCAAAACTTTCTGCAAGCACAACTATTCCCCCAGTTCTCTCCACTGCA
ACCTTCATCTCAGCGACACCAACCTGAGGAATAGAATATATTATTAACCATATCAAAGTA
ACCGTGCATAGACATCAGAAGATAACCCATAAGTCAACAGTGTGCGGCGATGTGCTAACT
AACAATAGTTTTTGCGCTGACATTTGTCCTTATACTTTTCTTTTTGACAAAACGTATTGC
ATATGCCCATGTTTTTAAGGCATCACCTTATGGACACTTAGGCAATAAGGCGCGCCCTGG
CAGTGCCTTAGCATTTTTCTCGCCTTACGCGCTTAGGTTGATCGCCTTATGACGCCTCAC
CACCTCAAAAACCTTGGCAATATGCACTTTAGACAGTTATCAAAAGAGGATGGCTTGCAC
ATAATCACTGGGTTGTCAATAGGTCACCATTCCTCTCTGTATGTCATTAGGTGATGAAAT
TTGCCAAAATTCTTACTAAATTAGGTTAAGAGAAGTTTGCATTATGATATTATGTACATC
CACTCTGAATTCTGAAATAACAGTATCTTACAGTCATGTAACTTCCAAGAAAATAAATGC
TTGCACAGATAGTTTCGAGACGATAAATGCTTAAACTAATATTTTCACATTATGGTGACA
CAAACATGCTTATGAGGTCTATGAATGATACACAGCAACACAGGTTCGAGTAAACAATAT
CCTAATTAAACAAGCTAATGTCTCATCCTTGACCAAGAGGTGATATAAATAATCTATACA
AGAAGGGGCAGGACAAACCTGGTCAAGTGCACATGCAAATAGATCGAGCACATGCCCTTG
ATGCACGAGTTGATTTCCAATCTCCTCGTAGAATTTAACGGCTTTGTTATAAAGTGGAGC
AGAACCTTTATCAAGATCTTTGTGTGAACGAATTGGATCAGATAACGGCTTCGATATTAT
CTGACATTTTGCAAAAAGAAATACCATTAGAACACAATAATGTATCATGCTATTTCCAAA
GGAAAACCTAACTCTACAAAAAAATCAATCTCCACACTGGAGTGTCATCATGACAAATGT
GCAGATTATTATTCGGTGGAACTTATGTTATCAGAAAAGGGGACATGATTTTTAACGAGC
TATGAGCTAACTTAAGTAGAAAGTCGGGTCAGCTTCACTACACAGAATACATACGAAACA
TCACTGGAATTGCAAAGCACAGAGCAAGTGAGCAAACCCACAAACTTTCCTCACATGAAC
TCTAAATACGTAATACCTAGGTATGCCCATCACAAATCAGAAAAGGCTTTCATCTTCGTT
TTCCACTAAAAGTATCAACCCAGATGGTCACTCAGACAGGGTTGTCCATGGTCGGTATCC
AACTTCTTGCTCCTAACACAACTAGGCTAGCGAATTTTGGGACTAAACTCACCACTATTA
GCAAGAACAGAAGGCGGATTGGGCAAGGGTGTTAGAAATACCCCACAGCATGCTAAGAAA
TGGTGCATGATTATTGTTGGGAATAGGAAAACAGTGACATGTTTGTTCTTATCACTGTGG
GTGCATTACAAGAGGAACCGGGGGGGGGGGGGGGGGGAGCATCAGTAAAGTGGAAAATAA
GACGTGATATTCATTAGAGAAATTACTTACAGAACCAGGTCCCTCAGTAGATGGACCACC
TATAAATGCCATAATTCTACCACCTGATCCAGGCACACAAATCCCCAAGAGGCTGGCTGC
AACACTTAACGCAGCTCCAGTACATCTTGATGCTCGCTGATCAGCAGAAACCGGCCATGG
GTCCTTTTGCAGTTCTTCTATAAGCTAAAGAAATAGAAAACCAGCATCAACAATTTGCAA
TTGAATTTTGCCTCCAAAATAATATTCTGCAATTAAAAAATAATAATAATGCGGTGCACT
ATAGACCTAAAGGTTTTGTCCAAGTTCCTGGACAAACATATCATGTCTTTTTTTAATGCA
AGGAGAGTTCTTAACTGAATTCAGTATAAACTCGCACTCCGAAGCAGGCAACAGGAACCT
AGCAATACTTTCTGCTGAAACACCATCCCTTGCGCCGGCGATCACACCTGGTTTTGTTTT
CCCTGCAAAGAAACCCATTTGCTCAAGAATTTGATCCTTCTTAATCTCCTTTGTCCCCTT
GAACACATGTGACTTAGGCAACAAGCCAAAACCCAATTCATGCACCTACATGAGTCGACA
TGTATTCATATCAATATTTTTGACCAGAAGACTAATAAAATGAAACATTTATGAAGGAAA
GGTGAATATAACCTGCACATATGTCCCGAAAGTAATGAACCCGACGAGGGATTGGTCCGG
CAACAGCTCAACTGCTTGCGCCAGAGCGGACTTCAAATAGCCGATTTCCTCCTCGATCAT
GCAAGTATCAACAACAAAGAGGAAGACCGGTGGCGACACAGGACCTGTTTCGGCGGTGGC
CATGTACTCGACAGTACAACATTCAGGATACAGTTCGGTAGGTAGGTTGCTTTGCGAGAC
AGTGGAGTATTGCTGGGGGAAGTGGTTGCGCTGGAAGCAGAATGGGCAGAGCCACATCTT
CGAATTGAAGTCGGCGACCGAGAAGGGGTTGAGGATGGCGCGGCAGATGCGGCAGCGGAG
TGGGGCGTAAGGAAGAACAGGAATGGCAGGGTTGGGGTTCAGAGGAGTGTACATGGCCGA
AACAGGGACGACGCAGCTAGCAGCATCCTGCTTGGTGCCCGGTATCACATTCCAGGTCAT
CCTTACCCCATCCCGGGCCTCGAGTTCCAGGAACTCAGACATTGATTCTCTGTGATCAGG
TTGCTCAAACCTAATTTCTTGGATAGACCCTCGGTCCTCGCGACAGTATCAGGCCTCCAC
CAGAAGCACGGAGCTGTTGATCTGCACTGCACATATAATAACAATTAATTGACCAAATTA
GCAGCGGGCTAGAATTGGGGCGTGAGGGTAAAAGTTGAACCACCCCAAAGCGCTGGGAAC
TATCAAATCGATTTCGCGAGCGGATGGGCGGATCGAAGTGTCTCTCGTCTTGGAAATGGA
TGGCGAATCGGAACAGCCTGAGCAAGCTACGTTGGGGCTCGCGTAACCGCGGAAGACGTC
GAACTGGGGCTATCAGTACCACCACACCCCACCCCAGCCCCATGGAGAGATGCGGAGAGA
GGAGTACCTTCGCCTTGGAGGTGGCGCGGCTTCGGCGGATGCGGGGAGGCCTGCCCTGTG
CTCCTCTTCTCCGGCGCCGGCGCCGGCGAGGAGAGGTGTTTCCGGGCAGGTGCGCTGGAG
TAGGGAGCGGGGAAAGCCGCGGGGGTTCTGGCCTCCTGTGGGCTGTGGCAGTCGGCCAGG
AAGAGAGAAACCCAGGACACCAGCGAAGCCAAGATGGCCTTCTCTCACCGTTCTTCGCTC
CTTTTTCCTTTTTCACAAACGAAGGAGAGTTTGGTAATTGATGTGACTGATATAGGCTCC
TTTGATATAAAGGAATTTTATTGGATTTTTGGAGGATTTTGATCCTTAGTATTTTTTCCT
ACGATGGTCGTTTGATTTGTAGGATTGAAATCCTTTGGAATTTTTTCATAGGATTCGTTT
GTACTACATTTTGAAGGAAATTTTTCATCCACTCAAACTTCTTTGTAGAATTCCTCTGTT
TTTCCTGTGCTATCAAACACACTTTCAAATCCTCTAGTGTAGAAAAGGACATGCCACTCT
ATTCCTACGTTTTTCCTATTCCTGCATTTTAAGAATCCTACGAATTAAAGAGGCCCTAAA
ATATGACCAGCATCCATGAACTCTTGACTACATACCAATGTATATGGACATATTTTAAAA
TATTGATTCACTTATTTAGTTGTGTATGTAGTTTTTAATAAAATAACCTTTGATCCAAAA
GAAGTGTGCAGAATAATAATGAGCACTGTGTTTTTTACTTTTTATTGGAAATAAAATCTA
AACATGTTTTTTCTTCGAAAAAAGGCCTCGATGTAGCACTTGATCGTTCATGAAAGATGC
TAAAGCAAAAGGGTTATTGAATTGACGGCACTTGATCGCTCATGAAAAATGTGGGCCTGA
AGGATTACTTGGTTAACGGTCGCGGACACAAGAACAAAAACAAAATTGTGTCAAATTATG
CTTCAGAAAGTAAAGAATTTCATTCGTGTCATTCAAAAAGACAACAACATCATCACAAAC
TCACGCGGACAAGGAAATCGTCCATAGCCATTTTCAGTCAGGTCCTAGGATTCAACCCCT
CCCCCCTCCCCCCTCCCCCATCCATGGTCGTACCACCCTTGAATGGCAATCCCTCCAGCT
GCCCATCGATGAAGGGAGGAGGTCTGGATAACCCATTCACTCAGGACGAGGTGTGGAGTC
CGATCATGGTGTCCCCTACGGAGAAGGCGATTCACCTCGACGATTTTAACAACGACTTTT
TTCGTGCTTGTTAATTAATCATCAAGAGCGGCGTCATGGTTGTCTTCCATTGTTTCTTCA
TGCTTGTTGAGGGTAGGATCTGCAATGATAGCCTTACCGTCGAAGACGAACGACGCACCT
ACATGGTAGATTTTCGACCGACCAACCTAGTTCATTATGTTGTCACGCTAATCACCAAGG
TACTCTACATCAGACTCGCAGCCGCCATCGACATCGCCATCTCACCGACGCAAAACGACG
TTCCTCAAATCAAAGTGCATCCACAATAGTTATCTCTACATCCAAAAACGGTGTCAAATC
GATGAATTGGAAGAAAACTCACTTCATGTAGTTAGGGGCTTCAATAGTGTTTCATGGGAA
TATTTGCTTGAGCCTCTCCAGTGGCTTGGCTTGAGTGCGAGATGGAGAGAATTGATACCC
TTGCTCATGTCTACATCAACCTCGGCCTTCCTCCTCAACACACCACCATGCTACATCATA
GAGGATTGAGTCGTCGTTGCTCTTCTTCATCGCGATTGACCCCTGCACCGGTTACTCGAG
GTTGCAACTGGGATGGAGCTTTGATACGTCCCAAACATATTTACTTTTCCAAACACTTGT
ACTCTTGTTTTGGACTCTAATTTACATTATTTGAATGAAACTAATCCGGAGTGGCATTGT
TTGAGCAGAACTACCATGGTGTTATTTTTGTGCAGAATTAAAAGTTCTCAAATTGGGCTG
AAAATTGACGGAGATAATTTTGAAAACATATAAAAAAATAGTGGCGAAAGAAATAGCAGA
ATGGGACCCACCAGGAGGCCACGAGCCCGGGGGCGCGCCCTACCCCCACATGACGCGTCC
CTTGAGCTCGTGGGCCCCTCAAGCCTCTGGTTGCCCTAATTCCAACTTCATAAGTACCAT
TTTGCGGAGACAAAATTGAGGGAGAAACTATCATTGCGTTTTACGAGAGGAAGCCTCCCC
CACCTCCTGTTCTTCCTCGGGAGGGCTGATCTGGAGTCCTTTTGGAGCTCCGGAGAGGGA
GGTTCGTCCCCGTCGACATCATCAGTCCTTCTTCGTCAACAATACCATGATGTTCACCAC
CAAGAGTGAGTAATTTCTTCGTAGGCTTGCTAGATGGTGATGAGGTTGTATGAGATTTGT
TCTGTAATCGAGTTAATTTGTTAGGGCTTGACCCTAGTATCCACTTTGTTCTGAGATTGG
TGTTGCTATGAGCCTATGACTTTGCTATGAATATGAGAGTGTTTTAGATCCTATCTTGNN
NNNNNNATGCACCTATTATGTGTCATGATCCGGACGGACCCCAAAGTGACAATAGTTGGG
ATCATCTCTCATGATGACCGTAGTATGAGGAGTTCATGTATTCACCATGCGTTAATGCTT
TGTTTCGGTTATCTATTAAAAGGGGGTCTTAATAACCCTTAGTTTCCCTTTGGACCCCGC
TGCCATGGGAGGGTAGGAAAAATATGTTATGCAAATTCTTATTATAAGCATGTATTACTA
TATACAGAATACATCCTACATT