| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_41863
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57554 |
6 |
2712 bp |
None |
Available |
Available |
LOC_Os04g52960.1, FRAME:-2, EVALUE:4e-84, 13104.m05444 protein nucleolin, putative, expressed |
CDS Structure of MLOC_57554
Contig Sequence (10725 bp)
>contig_41863 10725 assembly3_WGSMorex_rbca.fasta
CATAAGCAATACCTACACCAGTTTTCTTCTGGAAACAGAATTGAGAACAACGAGGTGGTG
AAACAAAGAGCAAGTATNNNNNNNNNNNNNNTCACGCAGATACCCAACTATTCTCCAAAG
GTCGGGTCTCTTTCTCATAACTTATTCATTGGTAGTACAAAATCATTTATCTATGAAGTG
GATAGATGTAGTGATTACATATCCATGTGGATCACTAGATTCAGGCATAGATGATTCCCA
TTGGAAACTCGCTTCTCAATCGAAATGCAAAATGCAACATACATTGTGTAAAAAAATGAA
GTGAGTTCCTTATTGTTGTCGGTACATATGGTACAATACGACGTAATGAGTTCCTTATGC
ACAAGGATTACTCCTACAATGATGATTATCCATGATAGTGTGTCTGCAATGACGACACAT
GTAATCATCTAAATGACGGAGTTTAAAATGAAGAATTTGGGTAAACCAAAATACCGTTAG
TTACTACAACTTGAGCACCTTCATTCATACATTATGGTATACTATGTTGTCTATATCCAA
AATATATTGGACAAATTCATTGTGGACAAATTCTATCCATCCATAACTCTCATGGTAGTT
CATTCTCTAGACATAGAGAAAGATCTATTTAGACCAAGANNNNNTGGAAATGAGATATTG
GGACTCAACGTTCCATAATGTCATTGGATCCACCAGACACAATTGGTTGGGACTCAAGAA
TGACTATCAATGTCTCCAAAGGCATCAAACATCTTGTCCTGGTTTTTCAAGTTTCAGAGT
AATCTGAACACCAATACCATTGGATACATTGATCAGATCCCCATTATGTCAGATCATAGA
TAAGCTTAGTTTTCCTACTAGGTGTGGTAGCCCTCTCATGAAGAGTCTTCGAAACAAACC
TCATGGCTACATCCACCAATCATTATCTCAACAATAATGTGTTTTGTGTTGCTGGATGCA
AACACGTTATGCAATAAGCAACATCTCTATGTGTATATCTTGTAAATCAAATCATGTGAC
TGGTTTTCTTAGGAAGTCTCAACCAACTTTTACATTCCAGAAATATGTTTATGGAATTGG
TATGTGACGGCTTCGAAATTTGCAAGAATGAGGCGGAGTATCTTTCTGAATTATTCATGT
TCAATGCATCATATTATACTCTTTTTCCCTTCATGAGTTTACTATACAGGTTCTCATAAA
GGTTTTTAATGAGAAATATCAACACAAGATCATATGTTCTACTTTTTGTTTTCCCCACTG
GGTTTTTTAGGAAAGTATATATGACATATTTATTGTCCTCTAAACTCTATGTTTCTCACA
TATTGAGTTAAGGGAGACAACAACTATTATATGTTGCAGCATTTTCTCCTTATTTTTTGC
ACTTGGTTTGAAGGAGTTTTTAACAATATATCATACACTATACTCCTCACATTTTTCTCA
CGGGGTTTTTGGAGGAGACCTTTCAAGATGATGATATTTTATGAACAAGTGTAGATTAGA
AGGAGTGTTAAAACTTAATTAACATGTGTTAATTATGGAGGAATCTCCCCTTGTACCAAC
CGTAGGGAGTTGCCTTTTGGCAATCGTCGCGTCGGTTCATGCCATCTCTCGTGAACGGAT
GCCTCTTCAAGGCACCCCTTCTATCTATATAAATATCTACAACGATATAATGAAAGATCA
ACGATTCACTTTACACCTCTCTCGATTATTGCCTCTCGTATTATTCTAACAAAAACAACG
TCTCTACTACTGTCTCCGTAAAGAAATATAAGAGCATGTTAATCACTATTTTAGTGATCT
GAACGTTTTCATAACAACAGTGCAACATGAGCTATTGCAAAGGCTTCACCGACTATGCTA
TATTAAGGCCGAGTTCTTTTGACCCGATTATGGAGAATCGGGCTTTGCAAAATCAGAAGC
TGAAAAGAACTCGATTTGATTGTCCAGAATCATGAAAATCGAACCATAATCGATAGTGCA
ACTCAGAAGCACCGTTTCAGGTCGATTCTGGCGATTCTTGGGCTCCCTCAAAAGAAAACG
TTTGGGTTTTGGGACATTACGCGTGTTTCAACACGAAATTACGGGCAAAATGCCCTCATG
GAGCCCAACCGACCAAGCCCAATAAGTGCATCGTGCCCGCTCACCCACGGGGACCCCTCG
CTCGATTCCCCCTTGCTCCCAGTCCCCGTCGCCGCTGCTAGGGTTCCAGTCCCCGCCGCC
CTGACGCGCCCATCCAACTGGCTGAAGCAGTCCTCCTCGCTGATTCCTCCGACCCCATAC
CGTCGGCCCCCGAGGTCCTACGTCCCGCCGGTCCTTCATCCCGTCGGCTCTAATTGCCCT
CCCCGCCGTCCGCTGACGTCCTTCACCGGCCTCGACGAGCCAAACCAGTGGTTAACCGCT
GCCTCGGTGAGCCCTTTCATTTTTCTGGTTGTAGATGATTTGTTAGTTCTTCTGTGTAGT
GATTTGCTTGATTAATGAATGGACGATTTTAGAGTATTCATAGATGGATGGATGAATGGT
GCAACTATTTTAAAAAATTTGGTTCTACGAATGCTCAATAGGCATATGAATGGTGCAATT
ATAGTCAATCTATTTGTACTATTTGTACTGAAACTGTTTTTATAGCAATCCATCATCTAA
TTTTTGTTCAGGGACGTTACAGACATTTCAACATACAACTTGTCCTAAAATCTCCAACCA
CAATCTCAGCTAATTTTTGTCCAGGGACGTTACAGACATTTCGACATACAACTTATCCTG
AAATCTCCAACCACAATCTCAGAAAAAAACTAAACGGCTGATGATTGATTCTGGTGAAGT
TTTCTTCTGGAGAAATAAAAGCTAAAAAGAAATGGGTCGAAGTGGGGCCAACAATATCCA
GTTTTATTTGAAGTTGTAACCATCTATAACGATTTCCGATTGCAAATTTATTCAGTTGTT
GCTGATGCTATCACCACAGAAGCTATGGTGATGAGAGACGGCCTGGATCAATTTTTGCGG
AAAGTGCGGATTAGGTCATACTCCCTCCGTTCCTAAATACAAGACCTTTTAGAGATTACA
CTATAAACTATATACGGATGTANNNAGACATATTTTAAAGTATAGATTCAATCATTTTGC
TCCATACGTAGTCTTTTAGTAAAAATCCTTAAAGGTCTTATATTTTAAAACGGAGGGAGT
ACTTAATAATTGTTGACGTTCTTGTAATGAAATGGCTCATGGGCTAGCAAATCATAGTTA
TTGTAATAGATTAACTTATACCTAACCGTAGTTTGATTTTAATAAAAATAGCCAAGATGG
CCTTCCCTCGACAAAAAAAACTGCACATTTCCAGGGATGGCTTCTCCCTGGTTAATTCTT
CCTCCATAAACAAATATAAGATGTGATAACATTTTTAAGTGCTTCTTACTACTGTTAAGC
TAAGTTGGATACCCAAGAAAACAAACGAATTAAACATATTATAGAAGGTCAAACCACCAA
AGGAAGCCACGAGGTAATATATATCTGACCAAAATTCATCACGGGTATAATATAAATCTC
CAGAACAGCCGATGTTGTGTGGCAGATAACCACCAGGTCCACGATAATAATAAGACAACA
TAAAAACAGAAGAAGTAGAGTCTCCAGGCAAAAAGGAAATGTTTGACATTTCACTAGTTT
CACGTTTCACTAGGGGTGGGTAGGTTGGAGTTTCTGCGCGGTTTCAAGCGGAATCACCAA
AGCTCAGTCATCACCGAAAGTTATCTTCTTCCCTGCCAAAGAAACAAGAAACAAATGTCA
AAACCAGTACTTGTCTGCCAAAGCAAATGAAACTAGAGCAGACTGGTGTTCATGTAGGAA
GCTACCTGCACTAGGTGTGCCAGCACTCTGCCTGGGGGGTGCACCACCCCGACCACGGCC
CCTGTCACTCCGGCCACCTCTGTCACCCCGGCCGCCTCTTGCCCCACCTCTGCGGCCCGT
GCCCCTGTCAAACCTTCCACCACCTCTGCGGCCCGTGCCCCTGTCAAACCTTCCTCCTCT
CCTGTTACCACCATCTGTGCCATCTCTGTTATCTGCCCTAGGCTTGGCTTCATCAACAAA
CAAGCTGAATTCTCCAATGTTAGATCCGTTCAGCTCAAGCGCTTTGGGCAAAGAACTCCC
GTCAGTAAATTCCACGTATGCTATCCTGCAGGACCAAACCAGCAGCCAGAGAGTCAGTTA
CAAGAAACAAGGATATGTATTGACCTAGCAGCAAATGCATTTTATATGCCAGAGCCAAAC
TTACCCTTTGCTTGTGCCAGTTTCATAATCCTTCGGGATTGAAACTCTTCCAATCGCTCC
ACATGAGCTAAAATGTTCTTGAAGCGAGCTTCGGATCTGGTGACAGAAAAACATTAAGAT
ATAACCCAAGATTTGTAATTAAAGCAACTAGGTCAGAAAGATATGTTTAACGCTTCGAAT
TACATCATCCTCCCCAAGAGATGAATCAAATCCTCTGACAAAGGCAGTATTGCTTTGACC
TGACTTCTTGAAAGAACTATTGTCCCTCCTGAACACAGAAAATTAAGGCGCGTCAATGAT
TAGCATGTCCAGGCAATTTCTGGATAAAAATCGGTGGGATAGAAAATTACCCGCTGCCAG
GAGTGATAGCGCCTCGCTCACGAGCAAAATCAAGCCTGACAGGCCTCCCCGACAAATCAT
GTCCATTTAGTTTGTATGCCTATCAGTGTCACAACATGGATAGCCAACTTAGATGGCAAT
TAAAAGCTTGCTTCACAGATCAGCTGATGAGACTACATAGATGACAAAGATACATAGTGT
ATTACCTTTTGAGCAGCTTCAGTTGTGGCAAATTCAACATGTGCAAAACCCTTGAAGCTC
CCATCATCAGCAGTAGCAAAACGAATATCAGACACCTCACCCGCCTCCCCAAAAAATTGC
TTCCTACAGGATGTGGAACAAATGAAGGTAAGGACAACATCTTTCAGTAAAAATGCAATA
ATGGCAAATCTCAAACTTACACTTCGTCATTCTCCACATTGTATGACAGATTCCCAACAA
AAAGGGTCTTTGACCCAGTAGTAGCTTGACCACTGCTGGCAGGAGTTTTTGGCTGCAACA
AATAAAGACAATGTTGAAGTCAAGTATCCATCAAACACAAGAGAAAAATTAAAACAGCAT
AAATATACACGGAACCATACTTCGCTCTGCTTGGGTTTTGCCACAGCCACCGATTTACTC
TTCTCCTCATCACTGTCAGAGCTCTCTTCAGAACTATCATCACCACTGCTTTCTTTCTTG
GCAGCATTAGAGACTGGCTTGGCAGCACCAGAAGATGAATCCTGCGATAGGATAAGAAAT
GCAATATGAAGCAAAATTTTCAGGCGGAAAAGCAAACACCAAAAATAAGCACCTTAGGCT
TCTTTTGTGGAGGCTCTTCTTCATCACTCTCATCAGAACTATCATCAGAATCGTCCTTGG
ACTGCAAATATTGAGTTACAACAAGATCATTCAATGTAAAATAGATATAGATACCACAGA
AGACAATGCTTTCAAGAAAGAAAGAAATGCATACATGTTTGCTCTTTTTCTCTGTTGTCA
GAGGCCTCTTCACAGGAATAGTAGACTTTGCTGGCTGCAAAACAATGGAAGGAATTTTAA
ACATTTATAAAACAAAAAAGAGACCAGGAGACAGCAAGTAACAGACACTTACTTCAACAG
AATCTGAATCCGAGTCACTATCTGAGCTGCCACTAGATTCTTCTTTCTTTATAGGAACTG
TTTTAACGGTGGTATCCTGGACATAGAAAGTAACCGCATTAGAAAGATGGCATAGACAAA
GGATTTTGCTAGCAGCAAAACAATATTAAATACAAATATCACACAAGAGAAATTACCAAG
AGTAAACAAGTACAACAGAGAACTTACTTCTTCAGAATCTGAATCTGAGTCAGAATCTGA
GCTATCACTAGATTCTTTGTCCTTCTTAACAGCAACAGCCTTGGAAGATTGAACTGGTTT
AGCAGTGGTATCCTGGAAATATATTGAAAACGTTAGTATCACATTATAAACACAGAATGA
TGAAGCCTTAGTTCTCATATAACTAGTAGGCTGATCACCTCGTCCTCAGAGTCAGAATCA
GAACTTTCAGTGGATTCTGCCACTTTCTTGGCTACTGGTTTTTTAGTGGCCATATCCTGC
AAACGTTTTTCCAGTTAGGACTAAGAAATATGAGTAGTCCGCAGATTTAAACGACAAGAT
CAGGGGAATGGTAAGTGCAAAAAATAAGTTTTATGCTTTTGTACTCAATTATCTCACATA
GAGATGCATTGGTAGAAATATAATTCTTACCTCATCTGATGAATCATCAGAATCACTGTC
AGAGCCATCCAATTCCTGGTTTTTCTTTTGTGCAGTAGCAACCGCAGAATTCTTCACTTC
ACTAGCTGGCTTCTGAAAACCAATGAAGTGAAACATGGTGAAATCAGGCAAAAAGGTATT
TAAAAATGCTATTAAATGATGAAGCTTCCACTTCAAAATCAGTAGTTAAATAACTACCTC
AGAGTCAGAGCTTTCAGAATCAGAGCTTTCACTGGATTCTTCAACCTTCTTGGCAGCTGC
TGGTGCTTTAGCGGGAAGCATATCCTGCATACATCGTTACACTCAGAACTAACAAAATAT
TGCTGGTGAAGACTGGCACTTGGGCATACTCCGCAAAATTAAAACCATGATAGCAACAAT
GGGAAGTATGAGAACGAGCAAATGGGAGTACTCACTGTCTCACATTGATATGTGAGGTAC
AAACTTGCTAACCTCGTCTGATTCATTATTCAGATTACGGTGCTAGTGGTTGAGTTCAGA
ATTGAGTGTACCCATGTGTTATGTTCATATTTTTGGAAAACAAAATCAGCTCAAGTTCAT
AGCTTCCAAACAATACTCATAACAATACCTTCTGTAGGCATTCACAAATTGATTGATTTA
GATATACAATAGTAATGTGCACCATATTCACTTCTTCAATATAAAATAAGCTCAAGATAC
ATTTGTCCTTCAGAACAGAAGACACAACTCAATAGAAAATTTAGCAGTTCGATGTCTCAA
CTATGATGTGTTGTGGAAAAACATACAAATTAAAATTTGGAGCAAAAATATAATCTATTT
TCATATTGCATCAGCAAGAGGTCCATCAAGGGAATAAAACAAGGAACATATGTAGCTAAT
AGGGTAAGCTTGAAGATTAACATACAATGAGACAAGAAAATTTGAGGACTATGTAACAAC
TCACATTAGGCAAAAGAAGGGAAAGAATAATTATGAAGATGTCATGGAAAAAATACTCAC
TTCGTCCTCATCAGAGCTGCTGCTATCTGACTCTTCAGTCTTTGCAGCAGGTTTCTTTGA
AGCGGCAGCAGACTTCTTTGCAGGTTCATCATCAGAGCTACTCTCGTCACTACTATCAGA
GCTGGACTCCTGTTTAGCAGATTGTGCAGCCTTCTTGGGTAGGACCATCACCTGGGAAAG
ATTATTACAGAAAGAAATGAAAATAAAGAGGAGATCACATACAGACAAGATAGAAAAAGA
GAAAGAACAATTATGAAGATTTCATTGAAACAAACACTTACATCCTCATCAGAGCTGCTG
TCAGAGCTGCTGCTGTCAGACTTGACAATCTTTGAACCATTGGTAGCAAGTGCAGCAGGT
TTCTTTGAAGCAGCAGCATGCTTTTTAGCAGGTTCATCATCAGAACTGCTCTCATCACTG
CTATCAGAGCTGGACTCCTGTTTAGCAGACAGTGCAGCCTTCTTTGGTTGAACCATCACC
TGGGCAAGATTTATTTAGAAAATTGATTTCAGGGAGTACTGAAAATATACAGCTCGATCA
CAACAATGACGCAAGTAATGTATGCAAATTATCTTCATGCGGAATAATTAGATGCAGTAT
CATGTTTAAAATAATAAACTTCAAATACACAATGCATGTTACTGTTTAACAAAAAAGAAG
GCAAAGAGAAGAATAGGTGAAGCACCTCGTCCTCGGATTCTGAAGAATCCTCATCAGAAC
TGCTGCTCTCGACCTTCTTTGCAGGGAGCTTCTTCTTGACTTTAAGATAACTCTTCACGG
GCACGACCTTCTCAGGTGCAGTTTTCTGCTTCTTGGCACTGGCAGCCTTCTCAATGTCAT
CTTCCGCATTTCTCTTGCCTGCAAATTGCGATCACGAGAGTTATGCACAGAATGATATTG
CTACATAAAAACAAGTAGACATATGGTTACTGAAATATATACCTTTCTTTCCAGATTTTA
CATCTGGGACCAGCGCAGCGGCAGGTGCAGCCTCGACAGCGGACTTCTTGCTCGACTTAC
CCATGGTAGTATTTCTGAGCTCTGCGCAAGGAGATGGGCGTTAACTTAAGAGCAACAAAC
AAAAACAACGCACAATTCATCTACCCTGGTATGGGAAAACAATTCATCTACACAAGCTAC
ACAATTTCCCAGGGTAAGTTTTTATCAAATCCTGGTAGCCAGTTTACACTACCAACAACT
ACACATAAACACAGAACAGCACGACGAAGCAGCACAGGACTAACAACGGGTACTAGAAGA
ATAAAATATATGGCCAAGCAAAATCAGGGCATAACTCGGGCAGAATCCTACCCGCTCGAG
AATTGCAACAGATTTCATCACATAGAGGCTAAAACCAAAAAATCGGAGAGCATCCTACAA
GTACAAACGATTCGAACCGACCAACTCGCAGCGAACTTGTAATCGGCACCACCGGCCACG
GGCGACGCGGCTGCGAACTCGACTACGCCACGGCGCTGCCCCCGGAGCGGCCGCCCCATG
GAATTCAGGTCGCCGGATCAGAAGCGGCCCGAAGTTTCACCGATCACCGCGGGTACGATC
GACGCAGCGGAGCATGGAACAGCGAAATAAACGAGTCGAGAGGGAGGGGGGACTCACCGG
CGGGAGGTTGGCGGCGGCGGCGGCGGGGAGGAACCCTAGTTCCCCGAGTCGACTAGGGTT
TTGGGGAGGGTTTGGGCGAGGCAGACGGCGGCGGCTCGGTGTTTATAGGAAGGGCGAGGC
ACCGGGCCTCCCGATCGATTGATTGAGGGCCACTCTCCGGCCGCGAGATATGCGGTTTTT
GCGTTTAGCCTCGCCTAGTTTGGGTGTTTCACCTTGGCTCTCGCGAATGCTCGGCCTGGA
GGCGTGATCGTCGAAAATGTGGCTTTCTTGGGGCGCGTTATGTAAAAGCGCCCGGATATT
TCTTTCTTTTTTCCGTGGGCCGTGGAACTTGGCCCGCGCGAGCTTGCTGCTGGCGAAGTG
CGTGGGCCTTTGTACAGCACCAAACGCGTGCGATACCCCACAAACGCGCACATATTGTTC
ATGGTTTCAAAAAATGTTCTCGAACTTGAAAAGGCTGAATTTCAAAAAAAATCTAGGAGT
CCGAAAATTGTTTACATATTTCAAAAAATATTTGTGAATATTAAATTGTTCCTGTATTGT
AAAAACCAATTTTAAAATGTTCACGAATTTTAAAAATTGTTTCCGAATTTATAAAAAAAA
TCACGCATTTTAAGTATGTTCATGGATTTAAGAAAATAGTCTACAATTTGAAGAAAAATT
GCAAATTTCGAAAAATGCTTGTGAATTTAATATGCCCATGAATTTGAAAGGATGTTGTTG
AATTCAAAAAAAAATTCACAAACTTAAATAACAAAAAATGAAAAATAAAATACACAAATA
AAACATGAAGAAAAAACAAGCATAAAAAATTGGTCTTTTCATGGGAACCAAATAGTTTAA
GGCCTCACATGGGCGTCACTAGCTCTCGAAGGGGCGTGCGGGCTATCCTGCAACCCACTC
GTAGAATAGTTAACGGGGATATGGCCCTTCGGTACACCAAAGCAGATGAAACCCCACTCC
AAGACATTAGGGGGTCGGGTGGCCCCCTAGGCCGGCTCGCGGTAGGTGGCCCGTTCGGCC
ATCACGTGCGAGCCGGCCCCAACGGTAGTCGACGGGTCAGTGCACGTCCCATCCATCCAT
ATTGGCGTACGACGTCAAGAAAGGAACCCGACGAGGGGCACGCATGGCTACACGGCGCGT
TGACAGGACCCGTGTGGCTACAAGACATCATGACGCGAGCAGGGCGAGGCTATGGGACCC
TGGTCATCCCTGAGGCTGACCGGGCGACCCGGCCCTGTAGAAGGTGTGTCGACCACTCTG
GCGCCCGGCTTACGGGTCCGTAATGGGCAATACTCGACAGCCGGCGGGCCCCACGACCAG
CTAGAGAGGCTGGCGACTAGGATCCACCCCTTCTTTCCCCATTATTGTAATCGCCCGGCT
AGCCTAGAAACCGAAGCCCAGTCCCCAGAGAGAGGGGCTGACACCCAAACACTTGATACA
CACCATACACCACACCACCGAGGCAGCAAGACCGATAGCAAGAGCTCCATATTCCTCCTC
ACGAACAGCTCGAGGAGCACCCTGTATTGTGATCACCTATAGTCACTCCGACAGGACTAG
GGGTTTACCTCATTGAAGGGCCCTAAACCCGGGTAGATCGGTGTCATGTGTCTCGCATAT
ATCTGGCCCTGGGCCGGGCCGGGCCTCGGCCCAGGCCCCAACAAGCCCAAGNCATGGAGA
TAAGGCCCAGGCCCCCCCAGGCCCACGAAAATTCTACGCTTCTCACGCCCCGGCCCTCCC
AATCCCAGACTCACGGCACCCCCACTCCACGCCACCGCGCTATCT
