| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_41860
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57551 |
1 |
434 bp |
AK354990 |
Not available |
Available |
None |
CDS Structure of MLOC_57551
Contig Sequence (8100 bp)
>contig_41860 8100 assembly3_WGSMorex_rbca.fasta
CAGCTCCCGGAGCGGAGGGAGCCACAGCACAATTCCAGGGAGTTGCTCAAACCGAGCTTC
GTGCGCGGAGCGGAGCTGTCAACCTAGAGAGGATCCCAACTGTCCCTTAGATAGACCTAG
AAAGATTTTTGGCGCACACGTTCTTGTGTCCAGAAGGAAATAGAGGAGGAGCGTGCGAGA
ATCCGGGCATCAAATACGAAAAGAAATGGCACGCACGTGGCTTTAGTCCCAGTATATATA
ATCAGCAGTCATCTAGCTTTTCGATGAGTACTACTTTTCTATGCCAAATTATTAACAAAA
GAGTTCTGGACACGGAGCGGTAGTTGAAGTTTGATTGCCACTGCAGCGGTACCCCGTATA
CCGGGAACAGTGCGTGATGGCACGCCCAATCGAAATCAATGCGCGTTGCTACGAACGCTC
CAACAGAACCGAACAGGACCAGGGACGAACTGACCAGACAATCGAGACATGGCACGCACG
GTGCAGTACGTTGAATTGAAGCGGTCAAGCGACGGTTGCCGTTAGGTGGTACCGTACGTA
CGAGCCCGGAACGAGCCACAGCCCATAGAGCTCGGGCCTGCTAGTACCTGGCTAGCCAGG
CACGTTACTCGCACGACTGCGTGGAGTGTCTAGACAACAAGATCGTCGACCTGTTCAGTG
AGGCACTGTGGCTAACAATTATCTACTTTGTGTTCATTGTGTTAGTCAAAAGGGGGCAAG
GAAATAGAGCACGTTTGGCCAAGATGAGAAAGAATGATTCCCTCGTGGGTTAGCCGATTC
GAGGGAGATCCTATCCGGGAAAGAGTAGAAAAATAGTAGTACTAGCGGACAAGCGTCCGA
GAAAGGGAAAAGGCAACCGCGGGTCTGGAAGCACCACCGCGACGGGCGCCCCCGTCCTGC
CAATCCCCCGCGGCCGCGCGGAGGCAAACGGCGACGCGGGCTGGGATTCCGACGGCGCGG
AACGGCCGGTGGTCGCGCGCGAGGGCACGGCTCTGGTGGTCTGGTCCAGGACGGCGTTGG
CAGCCCGGCGGGTCGGTTTTGCTGCTCTTGCGCCCGAACCGCGCGGCCCACCGCACGCGC
GACACGGCGACGGCGTCACGTACGTGCTGGGCCACGGGGGTGGTTGGTTTACTTGGTAGT
CTGCGTGTGGTCTTGTCAGCCAGTGTTGTTGAGACCAGTGACATTTTCCTTGGGGGTTAA
GGTTAAGGAAGGGATCGACACTTGGACCGATGTTGTTGAGACAAGCGAGTCTCCGCGTGT
TTGGACTTATTACGGACCGGCCGCTGATCTCACTGGGGTCGTCAGATACTAAGCCAAATG
GAGAGTGCACACAAAAATTGATACCTGTTCCTTTACGGTATGTCATTAATTTTTTATATA
TATGATAATACATGTCTCATTTATATCATATATTTTTTTTGCATCACATTTATATCATTA
ATTGATGAAGAAAAATAGATGCATCGTTGTATAAAAATGGTCCAATTCTACGTATATAGT
ACAATTGCACAAAAATGATCTACGTACACACAAAATGGTGGAGGTGAAAAATGCAGCGTG
CGGTGTACCTGTTGTGTTCAAAACATACGGAAACGGGTTGCTGCTCCCACCACATACGAC
GATCCCAAGAGTTTGAGAGCCTGAGCAAATATAAAATTCGAGGCCTCTAATATAAACATC
ATAAAATTTGTAACGAATATGATTCTATAGAATTTGTTAGTAGTGGGCAAATAAACTTTT
CATGTCAATCCACCTGATCTCTTAGTACTTGTGTTAAACGAAAAAAAAAAATCTTTTAGT
ACTTGTGTAATTTTTGTTGTAGGTATAGTTGAAAGTAAGTGTGTTTTGCAAAGTTTATGA
TGACAGTTGACATTGTAAACACTGTGTAGCTTCGCCATTGGAATTTGTTATTGTTGTAGG
TAAAATATGAAAGGTGGTTAAAGCCTTNNNNNNNNNNGAGAAATCAATAAAAATGAAAAC
CTAGGTGTTGGAGGGGTGTTATATGATAGAAATCAGAAGGGATGGAGGAAGGAGAAATGT
TGAAAAAGGGAGGACAAGGAAACCTATGAAAATTTATTCCAAAGTTTGTTAAAAGAACAC
AAAGGAGTTTCAAACCAAATCATTTCGAAGAGAGGCAAACAAAAGTCATTCTTAAACCAG
ACATGTTGGGAAAAGAAAGCTCAAAAGATTTTCTAGAAAGGTTTTCAAGGAAACTCAAGA
GTTTTCATCAAGCCAAAATTTTAAATCCCTTTTTAAAACAACTCAAAGTCAAATAATCAA
ATTTTAAAAGTTGTGAGTGTTACAGTCCTTTAACGAGGACATCTGTCGTGACAAAACCAC
GACAGTTTGGATACTTCTTTGCCTAATTGGGTCCACCTTTTCCTTCTTCTCCTGGCGTGA
TGTCATGTTCCAAAATGCGACGATTCTTCAGAATCGACAATGACGATCGACGTCCACATC
TTAATAGGTGCCCCTCCACATGTGGTTGGGCCTTGCTCGTAGTTGGGGATGACATGGAAG
AGCTCCACCTGGTCGGGGAGAAACATCGGTGGGCCCAGTGTTGCCAGGGAAAACAAAAGG
TAATTGAAACCCAAAGTTCACTATAGTCTCGCCGAGGATGGTAGTAGGAGCAAGGTGAGG
CTGGAGGGTGGGAGGGGGGCTTAGGGCCGACGGCATCGCTAGGCTGATCGAGTTGTGACA
CACTCAAGTTTTTCATTTTCACTAGGATAATAGGGGCAAAGAAATTGAAAGTATCCTTGT
AATCTTGAGCTCAAACGCTCCTGTTGTGAATAGTAAATTCAAAAAAAATAGAAAAATGTT
CAAACAATTCTGTTTTTTTTGGCAAACTTTAAGAAATGTTTGAAGTGCATGCAAATTTTC
ATCACGAAATCACGTTGTAGGAAGTTGTGGCAAAGAGCTCCCAAATGTGTTTGAAAGTAA
CATTTTCACAGCATTTATTTTGTTTTTTTACCATTCTTCCTACTATGTGATTATGTGATG
ATTTTTGCATGCACTATAAAAAAATCCTTAAAGTTTCTCAAAAATTCTGATTTTAAAATA
TATTTTTATTTATTTTCAAATTTATTGTCCATCTAGGAGCATTTGAGATCGAGATTAGAA
ACTTTGTGTCATAATAAATGCTATTTTTCAAAAGTAAATGAAATGGGAAATGGGCTAAAT
AGGCGTTAATCCCTCAAACAAAAAAAACTTCTCCACATTTGACAATTGGGGATGGGTTAG
AGATGTCCTAACAAGTAACAACCCATGTGCATGATTTTGAATAGTATGGCTTATAAGCGA
TCTACATAATTAGTAAAGCATATATTACCGCAATCCCAATTTTTTTGACTTACATTTGTC
TAGGTACAGGTGTATCTTGACAAATATAAGCAAGTAATTCGGCACTGAGGCAGTATAACA
TATAAGTATTTAGAACGATATCATTTTAGCATGTTAAAAGTCCATGTGAATTAGCATATA
TTAATGTCAAGGTTTAAAATGTTACCTACACTGTACCAATGTGCCTTATATTATGTCATA
CAAGGACTATCCGTCCCACTATACACTTCTTTAAAAGGCACATCTTTTGTTTCTCAATTA
TAGCCTTAGTTCAATTTTTAGTCTCTCAACTTAAATACTTGGCCACATGACTTTTAAACT
TTTGAAATCAGACATTTTTAATCGGCAGATCCATATTTTTGGATATAAATTTCAAATTAG
ATAAAATAGAAATATGAATGTTCTTTTTTCAAAAAAGGAGGATAAGCTCTTGCATATGCA
TCCTTACGATGCACACAATTATATATTTATAAAAATACGAGTATCAAGCTCAAATACCAA
AGTATAAAATGACAAATAAACAAGGTACAACCAAAGAAAATAGTAATATATGCCTACACA
CATTGAATAACACCCGAGCTCATGTGAACAGTAAATAAAAGAATACTAAAAAATAAAAAT
AAAAAGCGGAATTTTTACATGGAAGATGTTTAGGTGCATGATGCCCGTCTTAATTTGTTT
GGACATATGAGTAGCTCTCAGTAAAAAAATCTAATATCATTTTCTTTTTAGCATTCTCCG
AGCTAACTCTCTACACGGTTATTGCTTGCAAAATACTTCTCGGTTTTAAAATAGATGTCT
CAACTTTATATTAATTTTAGGATAAATTTTTAGTAATGTTAAGACACTTATTATAAAACG
GAGGGAATATCAGGTTTATCAAGTTTATTTATATTTATAAGCGTGTGTCGCCATCTTGTA
TTGAAGATGTGGAAGGGTGGTGTGTGACACATACTCTCGTCTCACCTGCGCCGCTACTTG
GAATACAAAATCTTCGTCGAAAGAGAATGCTCGGAACACAAATCTGCACCCAGGAACGCC
GCGGCCGCGCGCTCCATCGAATCGACGCCGCAGCTTTCACCTTTGAGGACGAAAACGATG
ACCAGCTCGCCGCCATCACCCGGTGCAGAAGAGGTGTTTCGAGACCAGACGGGTCATGCA
TTTGTTGCTGTCAGCCGAGCCCTCCAGGACAAGAATATCCTGGGACTTTGGTTTTTGATC
CTCTCGCATTTATTTATAGCTAGGATCAAGAGAGGATCTCTCCTGCTCTCTCCCAAGTCC
CAACAATGAAACGATGCATGAACAACGGCGATCCCGGCCTCCATTTTTGTTCCTCGGTTT
GGAATCGACAGCATAGCGTCTTCGAAACTGGAAGTTCTGGTTATACCCTAACTAATACTG
ATGTGGCGAAAGATCAAGCCTGTCATCGAGGAATATATGCTTACACCTTAAACCAACTTG
TATCCGTGGGAGCATTTCTTTTCTGAAGAAAAATGCACATCCTTTGGATTCTCCTTGTTA
TCTGAAAGCGACTCCTTGTGCTTTCTTCAGGTAAATATGCACGGCAATTCTCTCCCGCAA
ACCAAAGAAATAAATCTTCACTGCAATTCCGGGAAAAAGGTTTGTTTCCGGCATCTATTC
GATCTGGGAAAATGCTAACGCAGGCCCACGCACGTCTAGCTAATAGCTTTCTGCCGGTGT
CCAGGGCGAGCTTTGTAGCTGGAATTGCATCTGGACACACCGGAAAGCGTAAAATGGTAT
CGAAGCTTTTCTTAACTGGAGATTTAACGGGTAGAATCGATGGCCTAACATGATCTGTGA
AGAATCGACAACATATGCGGATGTGCTATTGTAGATTAAACATTGACGATCTCATGTTGT
TTCGCTTGAAAAAGCGACCATTGACGCTTAGATGTTAAGAAATGAACAGGTCTGAAATGC
CCATCTGAAATCCCCGGAGAAACCTTGGCCATGATGACCTACTGAGTACTGAATAGTAAG
AGCAGAACACAAGACCTTTCCTAGTGAAGTCCTCCAGTGAAGGCACATATGTCCTACAGG
TGCATGGCAGCATATATTCTACTAATCGAAGCCTTTGGCAGGAAGATGAGACATATACCT
TCTCCAAGAAAGTTTCCCCGCAGAAGCAAAGGGATATTGATCAACTAGCACAAGCAGATG
GTGCCATTGGCAGGGGGGAGTGGCAAAGGCACCGACTCCGTTGGTATATCTGCCGTAAGC
GAAGCATTGTTAAGCTAATTTTTGGCAGGATAACCATAGTGTGACGGGTTAGAAAGATGA
CCGGCAAACAGTTCACACTTCCTAATACCACGTTAGATTATAGGAGTAATGTTTTTTGAT
GCTGATGCAACAGAGGGCGCCATCACCTGTAAAGAGCTTTAATGTGTTGGTGTTGGCTAC
TTACGTGGTCACCTTTCTAGTCTTATCTAGATATGTGCAAGTGAATGAGATTAGGCATAG
TAAAATTTGATGAGTGTGAGGGCACTGCTGCATGAGAACGTAATCTCCATCTTAGAGTTT
TGCCTCCGTTAAAAAAAAAGTCACACAGTTTCTTCATGCTTCAGAAGTCACATAGAGAAA
AAGTTATTATAAAGAGTCAATTACACAACAGGTGTTTGAACTTGGCAAGAAAAATCAGTT
TGGTGCAAAAACTTGGCGCATACATTGAATTCATGATAAAACTTGACATGGACGTGCATC
TACGATGCTAATCATGTTTTGTATACATATCACGTGCTGACGAGGCACGCGAACATGACG
TGGAATTCAATGTCAGTGACCGGAAGATGAGGACGGACATGTGGCCTGATTCTTTGCAAA
AACACCCTGAAATTTTACCTTTTCTCACAAAAACCTTCACATTTAAAAAAAAATAAACAT
AAAAAGCGACGAGGACAATTGGGCCCCACCCGCGACGACAAAATGCAACAAAGGAAAATG
AGGAGGCAAAATTAAATATTGTCCAGGTTCAAACACACGACCTTCGACGTTAGTTCGGAC
AAGCTAGCCATCACACCACATATCACTTGATGTATAAAAGTGATTTCTATCTACTACGAA
AATTGCGCATGGCTAAAATGTTGATCAAATGAGACTACATCAATATAGAAAAATGATCCC
AGGTATATATAAATTAAATAGATACACAATATTCATGATGTTGCTCAAGTTATATTTTCA
AAACTGAGATGTCATTGTAGGCATGCTGCTGAATTCTGCTCGGTTGCTTTTCTTGGTGTA
TTCTCCTTAGCTAGAACAACCATCTTCTTGGTGCAGAGTGACCCTACGTTGGTGGTTTAC
ACAAAAATTGGATGGAAGGCTAGAAGAATTCAAACCAACCGGTTGACAAGAATGAACTTC
TCAATATAAAACAGTGATCCGGGACATATTCTTGGGGCATATAAATTTGGAGAGTACCGT
AACAAATTTTGAAGCAGTACATCATCATTGATAAAACACCGTGAACAAAATGAAGTTGAT
ACGGTAAACCTCCTGACTGTGCGAACTGGGGCATCGGGCCAAGGCTAAAGGTGTTGGTAG
CGGCGTCCTTGAGCACCAACAATCCCTTCCTTGTCCTGTGACAGTGCACAAAATAGCGAT
TTAGTTAAATTTCACTACTTGAGGTAGTCTAGCCTGCCAACTTAACCAATGCAGTAGCTG
CCTTTACAATGCCAAGTGAAGTAAAGGAAGTTTGCAATACAGGATTGTTTTCTCGATTCT
GGTCACAACAGTAATAGACATGACAAGAATATATTCACTACAAAATAATTATATTCTGGT
CATAAGAATTATTTTATGGATGTGTGATTTGAAACAGAAGATAGGTACCTTCACAACAAC
AACTACAACACTGAAAAGCATAATACATTGAAGTGAAGTATGAAGCATACCGTGAATCGT
GTTGTTTCCATCGTTGCGCAGGAGGTGATAGGTTTTACCATCAAGAACAAAGCGGGCGTT
GGCGATTCTATTGGCTACACGCCCAACCGTCGCTCCGAATGAAGCAGAGCCACGCTGATG
AAGAGACCAGCACACAAACACACAGCGATTTTGAATTTAGGTGTGTTTGGACCTTTGAAT
CATTCATGTAACATAGATACATAATTAAAGCTGCATTACATATTTCAACATATATTACGG
CCAGGAGCAACTTTCCACCTACTTTTTCGCCTCCGTGATACTTTTTTTCTCATGAAGCAA
CGTGTGCGTTTCTGTGTGTTCCATACCATCATCCAATAAACAGAGAAGCAGAAAGAGTAG
AACAATGTGTACTCAAGCAGTGAAAACGGAGGAACTCGTGACCTTACCATATATTCAACA
GCAGTGTCATACCCAAGGACAGCATCAGCCAAGTTCCCTACATAAAAAAAAGGTTTCACC
GCTTGAGCAACAAGACGCAAACATGCATACATGCCCTTGGAAGCAAGAGAAAGGTAATCA
TACCTTTGCTATCAGGCACAATGGCAGAGACGAGGGCAGCGCCCCAGTTGGTGACCTTGA
TGGAGAAATCCCCCTTCTTGTTCTTGAGTTCATAGAATCCGACCGCTGACTTCCGTGCAG
CATTGGCGCTGCCAGCCAGTGCAAGGCACAACAGCAACGCAACAGGAAGAAGTGCAGCTC
TGGCCATTATTGGCTTGTTGCACGGGGACGTTGCACAGCACTACTAATGGCAGCGTGGTT
TACTGGTTTGCACGTTGCAAAGGGTAGAGAAGAAGTCTGGTTAGTTGGCTACTCGAGCAT
