| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_41751
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57439 |
3 |
1314 bp |
MLOC_57439.3 |
Available |
Available |
LOC_Os04g45470.1, FRAME:-1, EVALUE:2e-57, 13104.m04561 protein vacuolar-processing enzyme precursor, putative, expressed |
| MLOC_57438 |
2 |
1821 bp |
None |
Available |
Available |
LOC_Os02g43000.1, FRAME:+1, EVALUE:3e-20, 13102.m04768 protein cysteine-rich repeat secretory protein 15 precursor, putative, expressed |
CDS Structure of MLOC_57439
CDS Structure of MLOC_57438
Contig Sequence (3752 bp)
>contig_41751 3752 assembly3_WGSMorex_rbca.fasta
GTGAGACCAAACATATACCTATTAAACGCGTCGCCCACCGTCGGACCCACCGTGGGCGGC
CGGCGGGACACGGCCATGGTGTACCGCAGGTGCAGCGCCAGCACCAGCGCCGACGCCGGC
TTCCTCGGGAGCCGGGACGCCGTGCTCGGCGCGCTGCAGGCCGCGGCCGGCGGGTACAGG
ACGGGCAGCTCCGGCGGCGTGCAGGGCGTCTCGCAGTGCCTGGGCGACCTCGCCGCCGCC
GACTGCACGGCGTGCCTGGCGCAGGCCGTCGGGCAGCTCAAGGGCGCCTGCGGCACGGCG
CTCGCCGCCGACGTGCACCTGGCGCAGTGCTACGTCAGGTACTGGGCCAGCGGCTACTAC
TTCCGCCCCTCACAAGGTACTACTAGTCTACTACTACTACAACGCGTTAGTATGAAACAT
GCACGTCCTCTGTTGTTTGAACCAACGAAACAAATGTACCGAATTCGTTCTCTACGAGAC
TTACCTCGTTTTTTTTTTTTGGCGGATAGTAAGACTGCTTCGTTGTGATATATCTTTTTG
AAAAGTCAAAGTTTATAAATATAAATTTTGACAAAATTTTTGTAGAGAAAAATATATAAA
TCTAGAATACCAAATACTCCCTGTGTCCCAATATTTTTGTCTTACATTTGTTTAAAAATG
GATGCATGTAAATACAAACACATGACTAGTTACATTCATATATAGACAAATCGAAGATAA
AATATTTGAAACGGAGGAAGTACATGTCATTAGATACATCACAAGACCTATTTTTATACA
TATCATTTTTGTAGTTACAAACAGTTTTTTCTATAAATTTAGTCAATATTTATAAAAGTT
GACTTTTCAAAAAATCTAGATGCACAACATTGCGAGACGGAGGAAATAGTATCAAAAGCC
AATTGGCAGAGCAAGTTGTAGGTAGTGAGATGGGTGCACTGATGGAATCGATTCCGATGG
GTAACGGGTAAACTTACCAAAGTTGATAAGTGAGATCGGTCGGAATATGTCCTCTGACAT
CCTTTTTCTATCCTTTTACGGGCTTGCACGGTGGATGGCCTTTTCACAGTGTGTCCACTT
GTCTATCAGTACTCTATTAGTCTGAAAATAAGTGTTTTAACTTTCTACTAGCTCTAGTAT
AATATTGTACTGTATTAAACTTCAGACACTTATTTTGAAATGAAGGGAGTACAATCACCG
TACCAGCTGTAAACTATGAGTACACACTCAATCAGCTGCCAGTCGATCCAATAGGCGTGT
GCGTGTGTCCCCGATTAGCACCGGAGAAAGGGACAGGAGAACAATCACTCGATTGCAGAG
AGAGCACCAACCCAACCAAAGCTTGCCATCATCATCATTCGCAACACCAGTTAGTCAGCC
ATATCGGCCGCTAAGCTCCACGGATACGATTCAGTCATATGATCATATCCCTAAGATATG
CTAATCATCTCGGCCTTTCCACGGGACCGCGGCATCATAAATCGGACCCCATTAGGCGAC
GCAAACAGTGCCATTAAGGCGATTTGAACTTTTGAGGTGACAGCGACAAGTCATGATGCT
CGATGCTATGTTCTCCGGTTTGGTCCAATGAAGCACCAAAGTCGACTGCCATCAGATTAC
CATAGATTCGAGCTTTTGGTCTAGGCTAGAGGTTCAGAGAACTTTCTGACGGCCACCAAA
CGGCACGGTTTTTTTGAGCATATACCGGCGTAGGGGTGCGGCCGCGATAGGCGCGCACAT
TGTGGGACTGACAATAGACCTTGCCGGCGGCTGACTGCTGACGGCCGGCCAACCACTCCA
ATTCTGAATATATTCCCGATAAACTAGATGAAAGGAGCCGCTCCACAAGAGTGCGCATCT
AGCTTTGTATACAGTGGTGCTACTGTATACTTCTTCCGTTCTTAAATATAAGTCATTTTA
GACATTTTAATAGGAAACTACATACGAATGTATATACACATATTTTAAAGTGTAGGTTCA
TTCGTTTTGTTTCGTATGTAGTCCTTTTAAAATGTCTAAAATGACTTATATTTAGGAAAG
GAGGAAGTATATATATCCTTAAGCAGAGGCCGGAGGTATTCCTCCTTTTCTAACAAAAAT
ATCCTTATTCTAATCCAATCGTCTGGTTTTCCTTTTGGTGATAAGATTATTCGCAAGACG
ACGTGGGGCGGACCGTGGCCATAATCATAGGCATCTTGGCAGGGCTGGCCCTTATCGTGG
TGTTCCTCTCCTTCCTCAGGAAATCATGTAAGCTCCTCACCCGGAAAACCGTCGCTTGTT
TTCAGGTTCAGAGAGCATCTGAATGCCAATATATGTTATGCCGATGGCAGAGTCTGAACT
TAGTGGTGTATCAAACTATCAATGCAGGTTAGGTTGCCTCTTGGAAGAAGCTTGAGTTGT
CGCATACTGGCCCCAGACCAAACGACTTGTGAAAGGGAGATCCACACCGGCATCGGCATG
GCCCAGAGAAGCTTCACAAAGATCCTAATCTCATCTTGTTAATTAGCAGCAATAGCTTAT
GTAAGTGATCTTCATCACTTCGTGGATGGTAGGGCTGCCTGTAGGAGGATCACTACCGTA
CTACAACGGGTCATCAGTTTTGGTCCACTAATCATGGCTCACCTCTTCATTATTACCAAA
TCAGATGGCACTGTAAATCATTCTAAAAAAATGACACTGTCATGCAAAGACATTAACACA
CTTCTGTTATGATAATCATTGCCTTTCAATTGATTGCAGTCAAATTTGGTTTACAAAGGC
ACGGCCATAAGCTACTGATTAACCCAACACACATGGGGCGCCATTGTTGCGTGGTTTCTT
TTAGAGGTATCTATACCAGTGTATGTTGTATGTACACCATATATGAGGCCTAGCTAGGAA
CCTCTGGAGCATTTGGTACTGCTCCCATATACTACAGCACTGCAAGCGGATCAGGCGCTG
TGCCCTAGAACCAGAGGGTTCCACTTCCCCATGACCCCATGTCGTAGCCGTCGCAAGCGC
TGATGCTCGCCTCCTTCATCTCGGCCTCGGAGACACCATTGTTGCAGATGTTTGCGAACG
CCCTCATGTGCCTCGTGCCGTACTGAGTGAGTGATCCGCACTGGGACTCGAACACTCGCA
CCTGACAGTTGGCATCAGCACAGACTACAGAGTAAGTTCAACCGGAAACAGAAAGAGTGT
TGCATGTTATGGGATTTTATATAAGGAATCGTTACACTCACCATCGTCCTCAGACAATCC
CAATCGTCGACCAATGGCTGGCCAGAGCCTCTGGCAGCCTGGAGCACCGAAGGCCCCTTG
TCGAATCCAAAGACAAGCTTCCCGATGAAATCGATACTGCTGTCCAGATGCTTCCTGTGT
AGCACGGTTTCTTTGACCTCCCTGAGAGCCCTCTGCTTCTCTTCCGATCCCGCATTTAAC
TTCTCATACTGAAAGCAACAAGATAGTACATTATTAGCAGGCAAATTTGGCAAAACAAAA
CACATGAAAATTACTCCCTCCGTTCCTAAANNNNNGTCTTTTAAGATATTTTACTAGAAG
TCTACATACGGAGCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATACATCTGTA
TGTAGTCCACTAATAAAACNNNNNNNNNNGACTTATATTTAGGAACGGATGGGAGTAGTA
ACAGAGAAGATGAACTAGACAAGGAATACAGAGTGCGAATTTTACCTTCCTCCACATGAA
AAGAATATCGGCATCTCTTTGATTGATTGCAC
