Contig Data
morexGenes
Links



Map Locations of contig_41747 (5371 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41747

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57432 1 1670 bp AK358309 Available Available None





CDS Structure of MLOC_57432






Contig Sequence (5371 bp)

>contig_41747 5371 assembly3_WGSMorex_rbca.fasta
CGCGCACGCGCGCACCTGCGGCGGGACGTGCAGCCGCTCGGGGGCGCGGCGTGTGTGGAG
CACGCGCCGCTCTCCGCTCTCGCCTCGGGCCACGTCGAGGCGGCCGCGGCCGTGCTCCTC
ACCTCGCTCGCCTTCCTCCCGCGCGCCGCGCAGCGCAGGCTCCGGCCGTGGCAGCTGCTG
CTCTGCCTCGGATCCCCCGACCGCGCCGCCGACTCCGCAGCGGCCGCGGAGCTCGGCCTC
CGCCTCGTCCACGTCGACGCGAACCGCGCCGAGGAGATCGCGGACACCGTCATGGCGCTC
TTCCTCGGCCTCCTCCGCCGCACCCACCTGCTGTCCGGACACGCGTCCTCCTCCACGCCG
TCCGCCGGGTGGCTCGGCTCCGTCCAGCCGCTGTGCCGCGGCATGCGGCGCTGCCGTGGG
CTCGTGCTAGGCATCGTCGGCGTCAACGCCGCCGCGCGATGCCTCGCCACCCGCAGCCTC
GCCTTCCGCATGAGCGTGCTCTACTTCGATCCGCTCTACGAGGTGCCGGATCCGCTATTT
CTAGGCTTATAAACCTCTGATCTGCCGTGCTAGGTTTTTACAATTAAATTGTTTTGTTAG
CTTACTTTTCTGCTGGTAATTTCGTAGCTCTAGCATTGTTCTATGGTTTTTGTTCGTTGC
TAGTTTGGGTGGTTTTGAAGACTTCATAGTAACTAATTGTTCCCTAATTCCAGCATTTGT
TTCATAATACTCCCTCCGTTCCTAAATATAAGTCTTTCTAGAGGTTTCACTAAAAGACTA
CATACAGATGTATATAGACATACTTTAAAGTGAACATTCACTCATTTTGCTCCGTATGTA
GTCTCCTAGTAAAATATCTAAAAATACTTATATTTAGGAACGGAGGGAGTATATGTGTAA
TCAAATTTTTGGCATTTAGTATCTTATACCATCCTGCTCGTTATGACCTATGAGTGTATC
TTGTAAGATAATCGTCCTATTTTTGTATGCTAAAGTTAAATCATTGCATTTCTGTATTTG
TTGAACTTTTAGTAATTCCTCAATATAAGAATCAGTAAAGATGATCAGACACAGACAGTC
TGAATTTTCGTGATATTCCGTATGCCCTTTTAGGAGTGATCTGATCTTCTTGTCTTGAGA
GCTAAAAACTCAATTTATCGTTTTTCACAACAAGCCGGCTGAAGAGTAGTTTATGTTAGC
ATCACCACATGAAAATAAATTTATGTTTTATGGCGGAATTACTATCTACACAAGGAATTT
TTCAGCTGTTGTTATTTTTTCTTAATCATATAATAAATTGTACCCCATGCAAATATGTAC
CAGAGTTAAAGCACCACACTGATTTCCAACTGTTAACATTTTGTGAAGGGCGCGGGCAAA
ACAAAGCGGCCTTCCATTGTATTTCCTTCTTCTGCCAGAAGAATGGATACTCTCAATGAT
TTATTGGCAGCAAGTGACCTTGTTTCACTTCACTGTGCGTTAACAAATGATACAACAAAC
ATAATTAGTGCCGAGCGTCTGCAGCACATAAAACCTGGTAAGATAGTTGATTCCTATTTT
CATATTTCTGTTTCCCCCTTATATTTGGCCTTGACAGGCTTACTGGTTTTCTTAGTTAAT
AGTATAGCACGCTCTGATTGACTATCTTTTGAGCCCTGCAGGAGCTTTCATAGTCAATAC
CAGTAGCTGCCAGCTGATAGATGACTGTGCACTCAAACAACTATTGCTCGACGGCACTAT
TGCTGGATGTGCATTGGATGGTGCTGAAGGTCCACAATGGATGGAAGCATGGGTATCAAA
CTTAGATCTGGCTACAATTGAATTTTTTCCTAAGGGCTTTTGAAATGAAAAACAGCCAAA
TATCTTCCTATAGAATAATCTGTTCCTTCTTTTTAGTGTGCCTTCTTTGAGATTCAGTTA
CTTTCCAGTAAGCCTTCTTTGAGATTCAGTTTTTTTCCCATGGGAACATTGAGTTCTGCT
AGTATATGTCGTCGTGACACTGTATTACAGTTTCCAGTTCACCAATTGCAGAAGACACTC
TTTGTTAACATAACTACATACGTCACTGAGGATAGGGAAGATAGTGCAAGTGATGTATAT
GTAGGAAACTTTCTGTTGGAAATAAACCGCGTCTGGGTCGGTCTGGGCGTGTCCGGTGCA
CACTGGGTGCGTCACGGCGTGAGCCGCGGAGAGCCTCGGGCGTAGGTGTGCATGCGTGCG
TGTAGGCCCGAGGGTGCGTGTGTGTGAGCCAGCGTGTGTGTGTGCGCGCGCTGGAGTCGG
CTAGCGCGAGCTGCGGATCAGAGACCGCATCGGGCGCTATACCAGGTCATGCGGGTGCGT
GGGCGCGCACCGAGCGCGCGATCGTGGAGCACGGGACGTGGGGGAGTGCGGGCGTGGGAG
CGCCGAGTGCGCGTAGCGGCGTGTCAGGGCGCGCGGCTACATAAGCAGCTCCGTCTGCAG
CTTGTAAAGGCGAGGTGATCGAGTCAGTGCTCGGAGAAAAACAGAAAAGGCCGTTGCTGC
GGCGAGGTGTTTGTGCGCTTGAAATCTCTCTGTGTCCCTCCTCCTCCCGTTCCACCTTGT
CTCCGGCGATCACCGGCCGGAGGCAGTTCCATTTTTGTGCTAACATTTGGTATCAGAGCG
AGGTTAGTGGAGGCGGCGACGACGGCGGATCGATGTCGATGCAGATCCCGCCGCTGACAC
CGACGAACTACACCTCCTGGGCGATCAAGGTGGAGGCGATCCTTGATGCCTAGGGGCTGT
GGGGCGTGGTGGAGCGGCGGATGGTGCGGCAGTGGGCGCCGGCAAGAGCAAGACGGCGCG
GGCGATGCTGCTTGGGGCGTTGTCGGAGGATGTCCTGATGCTGGTGGCGCCGAAACCTAC
GGCGAGGGAGGTATGGGACTCCCTCAAAGTTCGTTTCGTCGGCGCCGATCAGGTGAAGGC
CGCGCGGCTGGCGACGCTGCGCGGTGAGTTTGATCGGCTGCGCATGGATGACGGCGACGA
CTTGGATGTGTACGCTGGGAGGGTCTATGGCATGGCAGCGAGGTATGCTGGGCTCGGGGC
GATCCTCGACGACGCGTCGATGGTGAAGAAGCTGTTGGACACTGTGTCGGATCGCCTGTA
CGCGGTGGTGGCGGGCATGGAGCAGTTCTGCGACGTCGACACCATGCCGTTTGAGGAGGC
GTTGGGGCGGTTCAAGGCCTTCGAGGAGCGCACGCGGCGACGGGGACAGGGCAGCGGGCG
ATCGGAAGAAGAGCTGATCCTCACGGCGGCCCAGTGGCAGGCTCGACAGCGACAGCACGG
CGGCAGCAGCACGACGTCGAGCGGCAGAGGGAAGCGGCGCGGCAGGTGCTACAACTGTGG
TGTGCGCGGCCACTTCCGTCGGGACTGCCTGAAGCCGAAGAAAGCGGAGGCAGCGGAGCA
GGCGCTGCTGGTAGACGTCGGCGATGAGTTCGGCGGTCCAGGGCTCCTCTGAGCCGCGGC
TTAGGGGGAGTATTGGAAGTAAACCGCGGCTGGGTCGGACGTGGGCGTGTCCGGTGCACG
CTGGGTGCGTCACGGCGTGAGTCGCGGAGAGCCTCGGGCGTAGGTGTGCGTGCGTGCGTG
TATGCCCGAGGGTGTGTGTGTGTGCGCGCGCGTTGGAGTCGGCTAGCGTGAGCTGCGGAT
CAGAGACCGCGTCGGGCGCTAGACCAGGTTGTGCGGGTGCGTGGGCGCGCACCGAGCGCG
TGATCGTGGGGCGAGGGACGTGGGGGAGTGCGGGCGTGGGAGCGCCGAGTGTGCGTAGCG
GCGTGTCAGGGCGCGCGGCTACATAAGCAGCTCCGTCTGCAGCTTGTAAAGGCGAGGTGA
TTGAGTCCGTGGTCGGAGAAAAACAGAAAAGGCCGTTGCTGCGGCGAGGTGTTTGTGCGC
CTGAAATCTCTCTGTGTCCCTCCTCCTCCCGTTCCACCTTGTCTCCGGCGATCACCGGCC
GGAGGCAGTTCCATTTTTGCGCCAACACTTTCTTCTAGAGGTATAGACTATACAGTTAGC
TAAATGACCTGCCTACTGGTTCGAAGAGATAGGCAACTGGTGCACTCGTTTGTTCTTTTG
CCCTGCGCATGGACTATGGTCACTATACTATAAACTTCGGCAAGATGATTATATCTAGAA
GAGCATGTTTTACCGCAATGAAAATGAATGATTAAGCACTAACTGCGTTTTTTTTTTCAA
TAATAGGTACACGAGATGCCGAACGTGCTAATTCTTCCTCGAAGTGCAGACTACAGTGAA
GAAGTGTGGATGGAAATCAGAGAGAAAGCAATCACAATATTACAATCCTTTTTCTTTGAT
GGCATTGTTCCAAACAATGCTATTTCTGATGAAGATGAAGCAATAAGTGATGTTGGTTGT
GAAGATGATCAGCTATATAAACAGGCAAATGAACACTCTTTGCGGGTCTGCGATAGTGAA
CAGCAGACAGATGAAAGCCAACTAACTCTAGACTGTGATAAGAGAAGAGCCATCTCCAAG
GTTGAAGTGCCTGAAGCTTCAGGGCAGTCCCAAAGTATTGGCTTGAGATCGGAAGGAAGA
CGTAGCCGATCTGGAAAGAAAGGGAAAAAGAGACCTGCGCGCCGCAGATCACAACAGAAA
ATGGATGAATTGTCAACTGTGGAGAGTGGAAGTAATTATTCTTCACGAAGAGATGATGAT
ACTGTGATGAGTGGGCGGGACCAAGTGTTAAGTTCCAGTTCACGATTTGCTTCCCCCGAG
GAATCCAAAAATAAGCTCAGGTCTTCTGCTGAATCTCCAATGGAAATAATTTCTGAACAT
AAGTTGCCTGCAGGGCTTGGTAGAAAGCCTCCTGAGAGGCTTAAAGATGGCTTTGTCGTT
GCCCTAAGGACAAGAGATAATTCGGGTTTTCATGTTTCAAGAGAAAGAGTTGCTGGTGGT
GGCTGGTATCTTGATGTTGTGTCAAATGCTACAAAGAGGGATCCTGCTGCTCAGTTCCTA
ATCACATTTAAAAACAAGGTGGTAGTCGGGTTTCCTCTTTCTCTCCCCCTCTCCCTCTTT
TTTCTATACTGTTCCCTAACCTGTCAGGTATTTTTTTTTGTACAACTACACTACACATAC
TTATGATAGGATTTACACCTTTCAGGATACGATGGGATTGCGATCTTTTGTTGCTGGGGG
CAAACTTTTGCAGGTAATAATACCCTTTCCAGTTAGTACTCATTCCCTGACGATACGGTG
AGAGGTGAATATATAGTACTCCCTCCGTTCCTNNNNNNAAGACCTTTTAGAGATTCCACT
ATGAACTACATACGGATGTATGTAGTCATATTTTAGGGTGTAGATTCACTCATTTTGCTC
CATACCTAGTCTATAGTGTAATCTCTAAAAG