Contig Data
morexGenes
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Map Locations of contig_41737 (9201 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_41737

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57423 1 3587 bp MLOC_57423.1 Available Available LOC_Os06g46995.1, FRAME:-2, EVALUE:0.0, 13106.m10470 protein armadillo/beta-catenin repeat family protein, putative, expressed





CDS Structure of MLOC_57423






Contig Sequence (9201 bp)

>contig_41737 9201 assembly3_WGSMorex_rbca.fasta
CAAAGCTTGCTGAAATTGAAATGTTTCCCTGTCGTATGCAAATAGCTGATGAGTAGCATT
TCTTCTTTGATTTAGCCATTGTTCAGCAATTTCATTTCTGCAGACATGTGTTCTGGTTTT
CAGTTCCTGCATAGGCATAGCTGATTAAGATACAGAATAACAACAGTACAAACGGAGGTG
ATTGGGTAGCATGATTTATGCTGGACTGACTAAGCTTGAGTCCAAATTCACAGTGAATTC
GGTAGTGCGAGACCATTAAGCTTGAATCCAAATTCGATGTGAATTCAGTAGTGCCAGACC
ATTTATTTATACGGGTGCTCTTTTGTCTTTAGTTTTACTCGTCTGTCAGTGTGCTCTGTT
TATGTAAGTAGTGCCCTGGTGTGGTTCTGAAACCTTTTTGTTGGAAATGCAAGAGGATAA
TATTCTGCTCGAAAGCTTGCTGAAATGTCTTCCTTCCATAGCTGATGAGTAGCATTTCTT
CTTTCATTTAGCCACTATTTGAGCAATTTCGTTTCTGCATACATGTGTACTAGGTTTCAG
TACTACTCCCTCCGTTCCTAANNNNAAGTCTTTTAAGAGATTTCATTAGGAGTCTACGTA
CGAAGCAAAATGAATGNNNNTACACTCTAAAGTATGTCTATATGCATCCGTATGTAGGCT
ATTAGTGAAATTTCTAGAAAGACTTATACTCCCACCGTTTCAAAATAACTGTCTCAAGCT
TAGTATAAATTTGTATAGAGCTAGTACAAAGTTGAGACATNNNNTTTGGGACGGAGGGAG
TATTTAGAAATGGAGGGAGTACTATCTAATACTTACTCCCTCCGTTCCTAAANNNNAGTC
TTTTTAAAGGTTTTACTAAAAGACTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNTATA
GATTCACTCATTTTGCTCTGCATGTAGTCCCTTAATGAAATCTTTTAAAAGACNNATATT
TAGGAACGGAGGGAGGACTATGGTTCATGCATAGCCATATAACTGATGAGATAAATAACA
ACAGTAAGAATGGATGTGACAGGGTAGCATACTGTTCATTATAACAGCTTGTATCCAAAT
TCACTGCAGATTCTGTAGTGCCAGACCATTCAACACTTGTCTCATGCATCTGTAGATAGA
TAACTATGCCCGTAGGAGCCAATCCATTCAACACTTGTCTCATGCATCTGTAGATAGATA
ACTATGGATGTAGTGATACAACAGTAAAAATGGATGTGACAGGGTAGCAGACTGTTCATT
ATAACAGCTTGTATCCAAATTCACTGCAGATTCTGTATTGCCAGACCATTCAACACTTGT
CTCATGCATCTGTAGATAGATAACTATGGATGTAGTGATAATTTTAACCCACAAAGCACA
GACAGCTGGAAACAAATGGACAAGTCATTGCTGTAGATCCACGTGCTCATCTTGAAGTAT
CACGGGATGCTGAAATTGTGAGGGAAACATAGAGGAAGATTTTAGTGGCACCATCATCTG
TCTATCTATATAGTTAAAACAGAATGAGTCATGTTGGGAACATCATACATGTAAGCTAAT
GTATGAGTAGCATGCACGGGCACGGCAGGCTGACGACATCCTGAAAACTAATGCAGATTC
CTGAAGCAGAGCTGATGTTAACCTATATATAAAAATTGATATGTGTCACTAGGAAGAGAA
ACTCGTGTAGTGAGCTGTATGATTTTGATCCAATCATGATTGATCATAGTGCTTGCTTAA
TTTCAGCATTCGAATGAGTTTTTTTTTAATTGCAGTGTGTTACATAGTCTGCTGTTACAT
TCATAATGCTGCCATTTCGTTTGTTAAGACCTTCATATTGGTACCGAAACCTTGTAGTCT
GGGAATGCACGAGGATATTCTGGTCCAAAGCTTGCTGAACTTGAAATGTTCTGCTTTGGT
ATGCATATGGCTGATGAGTAGCATTTCTTATCTATATATTGTTTCTACAAATTCATTTCA
GCAGACATGTGTTCTGGTGGAAACTGCAGTTTCAATGCTAGAGTGCTGCGGTTCATGCAT
TATAGGCATAGCTGAGAAGATAATAAGAACTGCAGAAAATGGAGGTTCATGAGTCGGACA
AAGTGTTCTAACCAAAAACAACCAAACGATGGGCCAAGCAAGCATGGATCCAAATCCAGT
AATTCAGTCGGACAAGTGTCCAACTAATAAGACCTGTAAAAAATTGGAATATTTCTGTGG
CAGCAGGAGAGCTGCGTAGAGACTACTAACGGGATCATACTGAATTTACCAGTTGGCATC
TGCCCAAACATATTTGAAGACAGCATGATTCATCGGGTGCCCTGTCATTTGATATAAGAA
TCCCCTTTATTAGCATTGTTAAACATGACATGTATAAGTATAAACTTGGAGGAGAAGCAC
CCTGCTCTTTCTTTTATTGTGTTGTATTGTTTGCAGGAGGATATTCTGCTTGTGTTGTTC
GGAAAGCTTGTTGAAACGTTCTTCTTTCGTCTGCAAGCAGCTGATGTATAGGTGATTATT
TCAGCAGACATGTCCTCCGCTAGAAACTGTATTTTCAGACTTCCAGTACTACTCCTGCTA
CAGTAGGTCCAGCCAGGGCGGCAGTTCATGCATAGGCAATAGGCATTAGCTGAGAAGATA
ATAAATAAAGAAAAGTGAAAATGGATGTTCACTGCAAGTGAGTAAGACAAGTTGCTCTCT
CATTAACAAGAACAAACAAAAGATGGACCAAGTAAGCAAGCATGAGTCCAAGCTCACTGC
AAATTGACCAATTCAGCATTGCCGCAGACACGTGAACCAAGATCCACTGATCGCTTTGGC
TCTACTAGGGATAAATTTGAGCCACAGAGCACAAATACAAACAGCTAGTAGAAGCCTGGA
CAAGCCATCGCTGGAGTGATTCACGTGCTCATCTTGATGCATCACGGGATGATGAACTTG
GATTAGATGGAAAGATAAAGAAGGAATCTCTAGGTGGATATAGGACAACATGTTCTTGTC
TTTATATTTTGATGGCGTTTTGCGGCGATGGAGTAACCGTAGTCGGTTCGTCCGTTTCCT
AATAATAATCACCACTTGCTCCTGCTAGTCTTGAGATACATTTGCTACTACTGCAATTTA
CTGGACTTGTCAGAGTTGACGGTTCAGCGTTACAACATGTCTGAAACAAGTAATGGACTT
ACCACTTCCAATTGCTGATGATCATGACACAACCAAGACTGATGACAAAACTTGAATTTC
ACTGCAGTTGCAATGTACAGCACAAGGGAATCACAATGGTGGTTGGATGTGGATATGCAG
AAAAAAACTATATAGACAGCAAATCAAATGTACTACTAGCGCTAAATCAAAGGGGTGTTT
AGTGAAGGCGTCTGGGTAAGAAAGGGCGTCAGGAAAATAGTAACTTAGGCGCTCCATATC
TTGCTGAACATGGTCTGCAGCCTGTTGTTGGCAATCTTCTTGACGGCCTTCCTGGCGTCC
GGGTCGCCGGAGTCGGCGAGCTCCTTGAGGCTCCCGAAGTGCTCCGACGACACGATCTTC
TTCCTCCCGGCGCCGGTCTCGGCCAGCGACATGACGGCCGAGAGGATGAGGCCCTTGGCC
ATCAGCTTGCCCTCGGAGGGGTCGAGCAGCTGCAGCAGCCGGTCCAGGTTGTCGCCGTCC
TGGATGAAGATGACCCGGTTCGCCTGCTGCGACAGCAGGCTGGACAGCACCTGCGCCGCC
ATCTCGCGCACCCGGAACGACTTGGCGCCGAGCAGGCCGGCCAGCGCGGCGAAGTACCCC
GCCCTGCCCATCATCCGGCTGTACTCCTCCGACGCCTCCGAGAGGTGGCGGAGGATCTTG
AGCGTGCAGTCCAGCACGGCGTAGTCGCCGTTGTTGAGGTAGTGCAGCAGCCAGCCGAGC
ACGTCGGAGCTTGTGAGGTCGTCGATGGAGCTCGCCGAGGAGAAGCAGAAGAACCAGATG
GCCGCCAGGGCCACCTCCCGGGCCTTGTAGGAGTATGGGAGGTCCGGGTATATCAGCTGG
AGGAGCGACTGGATCACCCCCATGCCGATGGCTTCCTCCCTCACGTCGGCGTCGTCGAGC
GCCATGGCGTGCAGCAGCTCCACCGCGCCCAGCTTCCGGACCTCCTCCATCTTCTGCGAG
AGCTTTACGAGCTCGGTCACCACGCCCTGCTCCACCATGAACGTCTTGACCTCCTCCACC
CTGCTCAGGTTCCGGAGGACGGCGAAGGACGAGCTGAGCAGCCGGCCGCCGCTGCCGGCG
TCGGCGCAGGCGTGGAGCAGCGTGGTGACCCCGCCGTGCGCGCACACGGCCCACACGTTG
TCCGAGTTCTCCGTCAGCTCCCGCAGCGCCTGCGCCGCCCGCTCCCTGGCGAACGCCGTG
GCGCCCATGCCGGCCGCGTTCTCCATCACCTGCACCAGCGGCGCGATGACGCCGGCCTTG
ACCAGCATGCCCCTGTACGAGTCGGACCCCGCGACGACGGCCACGGCGCCCGCGGCCTCC
TCCTGGATGCGCGGGTCCCGCGACTCGAGGAAGCCGGCGAGCACGGCGACGCCGTCGTCG
ACGTCGAGCGCCACGACCCGCACGCACGCCTCGTCCTCCGACATGAGCTCGGCGATGGTG
GCCAGCGCCTGCGCCCTCTGCACGGGCCCGCCGATCCTGATCCGGGAGAAGAGGTCCTTG
AGGAAGAACCTCTTCTCGGCGACGCAGGCGTCGGCGCCCGGCCGCACCGCGACGATGGCC
TGCGACGGCGACATGGACGCGCCGGTGGAGGCCATCTCCTTGAGCTGCCGCACGTGCGCC
TCCAGCTTGGCGCTGAGGCTGTCCATGTCGCTCCGCAGGCGCAGCCGCCCGCCCCGGTAC
GTGCCGTCGCTGCACTGCGAGGCCACGTCCAGGATGCCCCTCACGGTGGCCGAAGCAGAG
TGCAGAAACTGAACCAACACGTGGTGTCCTTCTTCCCCTTCCTCCTCCACCTCCTCTGCC
CCCTCGCCGTCGCCGCCATTGCCGCGCAGCAAGCTGAGCCCGGAGCAGAGCTGCCGGAGC
TTGTCCTTGAGGGAATTCCACTTGGTCGGGAACTGCGGGACGGAGCAGCTCAGACAAGAC
GACGCCAGAGCCTCGAGCACCATCAGCGCCTCGCCATGGCCGCCCCCTCCCAGTCCCACC
GCCGCCGCTCCTACCATCTCGGCAACCATGGTGACAAGACAAGCCAACGCACTCCCGTCC
CGTGCTACCTATGCGGCAGCATGCATGTTGAGGAGCTCGCAACCAACCGATGGCGATGAT
GATGATGACGGTGTGAGTAGGAGGAGGAGGAGCTCGGAGTGGGACGGAACTCGTCGAGGA
GAGAGCTCAACTATTAATGGAGGCGTTGGTGGTGTAGGTACGTGCCAATTTCTCAGTTTT
GTACCCATGCAGGCAGTAGGAGTAGCCCCGTGTGGCGCCGCATCGGCGTGGCTAGGGTAG
ATGGGCGGCCGGCCCGGTAGCTGCTGGTTGGTGCTGCACCTGTCCTCACCCGCCTCTGAT
CTGTCTTCTCGTTAGCCAGCCAGCCCTCTCCTGCCTTGCTGCCCTCCTTTTGGTTTCTTC
CATTGGAATCTTGCTGCTCCCTCCTTCCCTCCAAAATCCCCGTGTCCTCAAATTGGCTTC
ATCTTTTTTTTAATCCAGTGGTCTCTTTTGGTGATTTTGTTTGTGGAATTGGAATGATGG
GATGGATCAGTAGTGGGTTGGGTGAGAGCCAGTGATCAAGGGAGCTGAAAACAACATGGG
CTGGGAGGGATCATCGTGCATGCTGGGGATGGGGCCAGGGGCTACGGTTAAGGGTTGGTG
ATCATGCACTAGCTAGCCCATTATGGGTTTCATTTCCAGGGTTTGTGAGGGCATCATCGA
CATCGAGTGTACCTTTCCCTGAGTAAGATAAAGGCTTTACGCTTTCTCCTTCTGTGATTA
AGTATCCACGAACTGTACTGCGCCCTGGCTGGGGATGCATGGATGGATGGATGGATGGAA
GGTGCTGCGCAGTGCCAGTGCTGTTGGGGCCCTGTCTGGCCTAACCAACCTGAGCCGTAG
GGCCGTATGATACTTGTGTGAAGGTAAAGTCACGGTACAGGGGAGGGGACTGACCTAACC
AACTCGCCCTGTTCTGATCATGAGCACGTCTGTTCGTTGTTCGCTCGGTTCTGTATGTGT
AGTGCTGGGGACAGGTCCCGGATGGAAAATGCGACGCCAAAAAACATGTGGTTTCTCTCC
ATGTTATTTTATGTTTCGTGCATGTGCAAATTGAGGGCATTATATGGATCAAGTAAAGGT
AGAGTTAAGAGATAACTGCAAGTAAGGCCTTGTTTGGAAGCACTTAGATTATATAATTCA
GTTTTTATAATCTATTTTGTCTTCAAACATGACAGATTGTGGTGTAGATTATAAAAACTA
GATGGGCAGATTTTAAAAACTCATAATCTACTCTACCCCAGCTAAAATCAGATTATGAAT
TGTTAATGACGCATTATCCTTGTAAAATTGGAGATAATTACATTCCTGCCACCGCCACCC
TCCTCTTTTAAAAAAAACAGAGGACAGACAGGTCATTATGCAATGTAAAATCTGGATTAC
AGTTTATATAATCTAGCCTTCAAACATGCCCATCTAGATTATTTTCATAAACCAAATTAT
ATAATCTATCCTCATAATCCAAATTAGCATAATCTATTATGGTTTCAAACAGGACCTAAG
AACACGAAGATGTAACCCCAATAACGAATGATCTCATGACAATGAATGTCCCGTCTAAGT
GTCTGAGTGCATTGGTTGTTCGATGTCCAAGCACCCTCTTACTATGAGTTGCTCTTGTCA
CATATATAGGGACTGCAAAAAGGCATTTTCGGAGTAATAGGGCAGTTTGGGACGTCACCG
GCAAGTACGAGGAGGATAGATGCATTTTACTCACAGAATTCATCGCATCTTAGTGGAGGT
TAATGAGCATAGTGTAGAGTTGTTCTACATGGTACAATTTTTGCAAAAAAATTTGAAGTT
GTATTTATAATTTTTTATTGTTTCATATCATTATATTATTATTTTCATTTACATTTTATA
GTAATTTATATTATTTTCTGTACTAATCATTAATTTAGTGTTTAGTGTCAGTTTTCGTTT
TAGTTCGTCTTCTTTTCCATAGAAAATCATTATGCATGGAAGTTAAAATCACTCGCCAAT
TTAACACAATTTGTAAGGCAACAAGGTTCGTGGAAGCTTCGGTAGAGATCGAGATAAATC
CCCATAAATACCGAAACCCTCCACCAAACTTTTAGAAGAATTTTATCGCCGCCACAAGTT
CCTATTTTGAGAAGATCTCATCTACATCTGATGTCCTATTCCGGAGCTCTGCCGAAGAGG
GGAGGTATTGTTGGAGCAATATTCATCAACCTTGTTGCCTTCATGATTATGCGTGAGTAA
TTCCATTAGGACCTTAGAGTCTATAGTAGTAACTAGATGATTCTGTCTCTCTCTCTTTAG
ATCTTCAATACCATGTCCTTGTGAGCCTTCTCATATGATCGAGATCAATTCGATGTAATC
CGTGGTGTGTTTGTTGGGACATGATGAATTGTCACTTTATGATCAGATTGTTTCATTGAA
ATCAATTGAATCTTTTGAGATTTTCTTGTTGTATAATTAAATAGCTTTGCGTGCTTTTCG
ATCTATCTATCTTCTTTTCCCAAGTTCAGTCAAGTTTTCTTCAAAGGGAGTGATGCTTTG
TAGTGGGTTCAATGTTGAATTGATCTAACCCAATGACAACAAGGGCTAAGACACGTATTG
TATTATTGCCACTAAGGACAAAATGATGGGGTTTTGTCATATTGATTGATTTCTTCTATC
TACATTATGTCATCTTGCTTATTGCAATATTCTGTTTTCTCACAAACTTAATACCTTGAG
ATGCACATTGGATAGCGGTTTTGAGGTGGATTATTAGTATTATATGTAGTTTGATTATTG
ATCTACTTATCATGGACATAATGCCTCTATGAAATTATGCCATGAATGATAAAAGTCATT
AATATTGCTATTCGGTCAATTGCCAACTGTAAATTGTTTACCATGCCATTCGCCCGTTTT
CAAGAGATATACCACTAGTGAACCTATGGCCCTGGGTCTATTATCTATTATTGGATTCTT
CTACATAATTTCTTTTTTTATTTGCCTTGATGCTTTGTTACTATCTATCTCTATCATTTG
TGTTTAATATTGTAACTATCCAGACAAAGAGATTGACAACCCTCTTGTTGTGTTGGGGTC
AACTCTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGT
GTGTGTGTGTTGTGCGCATGTGTTGCTCACGTTGCTACCTTGGTAGGCTCCTACTGGATT
GATAACCTTGGTTCTTTAACTGGGGTAAATACTTGCTACTGTTCCACTTCACCCTTCCTT
TTGGAGGATTCCCAAAAGGAAGGGTGAAGTGGAACAGTAGCACAAATCTTCTAAACTTGT
GATTTAGACCTTAGTACATGGATTTGAGGCAGAAATTTGTTAGACATTCCACTAATTTCC
TGGCATTCATTATGGTACTTGATATCTCCCCCTAATGTGTGGAAATGATCATCGTTGAAT
TAACATACTGGCCTTGAATAACCCATTATGAGGGACTTGAGGTATTAACAAAATACAATT
ATTCCTCACATAGATACTGAATATATGGTGAGGGGCCAATGATGCATGTGGGGGTGGTGA
TACACTGATATCGGTAAGTAGTCGAATTACCGCAGGTGGGAGATACTCGGTAGATTTCCA
CACATCGAAGATAGAAGGGAGTAATAGTATGCAATGTGGTCATGAGCATGTAAACCTTCA
TGACTCCAGCATGAAGTTGGTACTTGTAATTATGAAGTGAATATCATGCAATGACCTTGA
TTCTTTAGATAAAAGATTCGACCAAACCATTTTGAGTTTAAACATATGGAACAAAGTGCG
AAACTTTAATCCTAGGGCCATACCAAAGCCGCGCAAGGAGAATTCTACGACATTGTGTTG
GAAATATGCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTGTATTGATTGGGAACACAAATACATGTGTGGATCCA
TAGATAAAACACTGTCCCTAG