Contig Data
morexGenes
Links



Map Locations of contig_41652 (4096 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41652

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57331 1 392 bp None Available Available None
MLOC_57330 1 1076 bp MLOC_57330.1 Available Available LOC_Os04g49410.1, FRAME:+2, EVALUE:1e-91, 13104.m05042 protein expansin precursor, putative, expressed





CDS Structure of MLOC_57331






CDS Structure of MLOC_57330






Contig Sequence (4096 bp)

>contig_41652 4096 assembly3_WGSMorex_rbca.fasta
CGTCCTTCACCGCCAGATTCACCGACCACGGGCTCGTCCCACGCGGCCGAGAGGAGGAGA
TGATCGTCCGGCTTGCGCTCCGTCGCTCCCGGGAGGCAGCCGCACGACGATGCTGCTCGG
ACTAGCAACGTCGGAAATTCATTGCGTCCATGCAACCGGTGGTTGGATCCGGTGTTGCTG
CCTCACCGAAGGTGGTGCGGTCCGCCTGGCGTCCGAACGCCGTGGCGGAAGCGCAACCCC
TCCGTTGACATGTCGAGCACGAAGCATGGCCGACCTCAGACGATGTCATGGCGCGGCGTG
CCCAGTGGGCGAGGCAGCGGGCACGGAATGCGACGGAGGTCATCGCGGCGACGGATGTTG
GAGAGGCGGAGTCACATTCTGCGACGCTCCGTAGGATGCAGCACTGCAGTCGACGCAACC
GGGTCGTGGTGGACGTCAGCTCCTCCCGTGAAGGATCCATCATCGACCTCACATCAACTC
GCACCGTTCGAGATATGGGCTTCGACGAGGAAAAATAGGGCATGAGAGACGGCGGGAGCT
CGACTACCATGAGCCAGCTAGTGTCTCATGTCCTACTCTACCTCGTCGACGATTGGACCG
ACACTATGAGTAGCGCAGCCAATCATCGAACATAGACACGACGGAGCCGAACAAGCTCGG
CTTAGTACTAGTTTTACGTTGCAGGTAATAGTATGAATTTAGAAATTTTAATTTAAAATA
TTTAAATATAGACTGTATTATTTAAGATGTAATCGGTTAATGTTCACCCACGCGCGTGTG
CATGAGTGTGATGGGTCGGATTTGAGGTGTGCTGCTGTAGATGCTCTTAGCTTGGCCATT
TCGCCGAAACGAGAAGCTGCGGTGCAGCATGAAAGGAAACCAAACAAAGGAGCAAATACA
CTTTTTCCCCGCAAGAAAAAGGAATAAATAAATCAAAAGCTGGAGCACTCGAGAAGAAAA
CCTGCACTAAAAATATGCCCGTGCGCACATGTATAAAGGCAAAGAAGGCACCAGAGCCTG
CAAATTACTCCACATCTCCTCTCAAGCACTGAAGCGCAGCTCCTCTTTCACACTCTCCCC
CGCCTCACTTCACCGAGGCGCACGGACGAAAAGCTGCTTGCTGGCTGCTGGGAGCGAGCC
ATGGCTCCCCCGCTCCTCCTCGTCCTCTTCCTCCTCCTCCTCCCCGCCATCGCCGCCGGC
CACCAGCACCCCTCCTCCTACGGCTCCTCCGCGCTCTCCGAATGGCGCAACGCCAAGTCC
TCCTACTTCGCCGCCGACCCCGGCGACGCCATCGGTAAGCACGAACAAACCTCGCTCGCC
TAGCCCTCCGTCCGTCATGGCAGCAGTCCAAGAAACGAATCCACCAAACCGTCCTTGCGC
TCTTGCCAAAATTCATCCCATCCATGCTGCGGGCATTAATTAGCTTTCCTCTTCCGGTAC
GTTGCCGCCAACGGAATTTCCACGAACCGCACGCTCGGTTACCGGAGCTTTCCGCTTCGT
ACTGCAGTTGGTTCTTGCAATCCTGGCGGCCATGGACGTGCGCGCGGAACTGATCTGCGC
TTTCTTGTTTTGTGGGGATGCGTGCGGGGTGCAGGTGGCGCGTGCGGGTTCGGGGATCTG
GGGAAGCACGGGTACGGGATGGCGACGGTGGGGCTGAGCACGGCGCTGTTCGAGCGCGGC
GCCGCCTGCGGCGGCTGCTACGAGGTCAAGTGCGTGGAGGACCTCAAGTACTGCCTCCCC
GGCACCTCCATCGTCGTCACGGCCACCAACTTCTGCCCGCCCAACTACGGCTTCCCCGCC
GACGCCGGCGGCGTCTGCAACCCGCCCAACCACCACTTCCTCCTGCCCATCCAGGCGTTC
GAGAAGATTGCGCTCTGGAAGGCCGGCGTCATGCCCATCCAGTACCGCCGGTAATGCTCC
ATTCTCGCCTGCATTCGATCTCACTCTAGTACTTGTACTTTGCACTCCATGTTCGGCTAG
ATCTAAGGCTAAAGTCTCCTCGGTTTTCCTGATTCCATTTGTGTGGGGCTGGAAAAGTGC
TTGCCAAGCTAGAATCGCATTGGTTTGCGCAATGTGGGATCTCAAAAAAGCTGAATTGCA
AGTGTCCGTTGGTGAGGAAAGTATGGAGGGGATCAAGGGGACCCTCTTCCACTGTGGTGA
AGTGCAAGTTATGTTTGTTATGATTTGAATTGAGGTGGTTTTATCTGCTGTCCTCGCCCT
TTTATTATGCTCTATAATGTGGCTTCCCTTAACTAACAAGGAGTACAAAGATGCATAGAA
CCAAGTATAAATGTACTAATTTGGTTCGGTGTTTGGGTTAGGAGGAAAGCACCTGTGTGC
TTTTCGATGCAGCATCGAGCCATTGACTATCCAGAGTATCACATGCCTGATTTGCGTGAT
GCTGGATTTGCATCAATGATACTCCCTCCGTTCCTAAANATAAGTCTTTTTAGAGGTTTT
ACTAACGGACCACATACGGATGTATATAGACATACTTTAGAGTATAGATTAACTAATTTT
ACTCCGTATGTAGTCACTTAGTGAAATCTCTTAANNNNNNNNNNNNTAGGAACGGAGGGA
GTAGTACTGTAACAGAGCATGGTTCAGTATTTGCTTCCTATTCATTAGTGTAAGCATGAG
ACTTCCGTGCCTCCTACAGTTAATATATGTTTGGTTGGAATCAAAACAACACTATCATCT
CGACGATGATGATACAACTTGTGATAACTAGTGGTATCATTCTATCCTGTGCTCAAATGT
AAGGGTTTTTTATTCTGCGATTAATGGCGGTCTTAAGGTTACTAGAGTGCAGAACCAATA
TGATGAGCTATGATAACTCATATGAAGAAATGAATTAGAAATATAGAGTATAAAGAAACT
AAGCACCTCCTATCTGAGTGATTATCCTGGGTTTCATGGATAGCTGAGGAATTCTGGGAA
ATGTGGAGTTTATTGACAGTTTTTTTTTTTGAAAAGGAGGTTAAAAACCCCGGCCTCTAC
ATCAATCGATGCATATAGCCATCTTTATTTATTATTCAACATAGGTCTAACAAGAACATA
CATCAAGCCATCCGAGGTCATCACTCACACCTACAAAACTCGATAATGTGGAGTGTTCTC
ACTCCCCATATCTAAAACCGGTGCCATCGACGATACATCCACATAACGTATCGGAACCCA
CAACCGGTGCGGCAGACCTAAAACGTACACCACATGCACACGTTTTAGACGCCATCATCA
TCATCGAGCCGCTGACTCATCTTCAGGAGAGAGATCTGCATCATCCTTCCGAGTCCGTCC
ATCCGTCGACGCCACCACAACGCCCAACGGCGCCACCGCCCCGTGCTCGTTCGTCCAGAT
ACGAAGATTCTGGAAGATCTGTCGTGCGTAACACCTGTCGACCAGGCATGACTTGACATC
TCCACCGAAAGCTCCGTGCAAGACAAACCTGCTCCATCTCCTGCCTCTATCTTCCAGCTC
TGCTCAACAAACGATGCTTTCAAGAGAGAAAACGAGACCACAGTATCGCCATCGTCTGAT
CCGGAAGACCAGATCCTAGGGTTTTCCCAGAGGAGCACAAGTCGGTCGACAGTAGTTACA
TGACGATGCCTTCATCAAGATAATGACGCCAGTACGCCGCGCCGCCATCGCCTGTCATCG
GCTCGGTTCCCACCGGCACTATGTCTTCCCGACTTGCAGCTGGAACTAAATGGTGGATCT
CGAGATCTGACCATCCGACCTAAGGCCGACCACCTCCGACGGAGGAGATGGCCACCACCA
CCTGCGGCACCGGCAAAATCAGATCTTACCGGAGGCGTCGCCGACCAGTCAAGCGTGGCC
ACATCCCCTCCTGATTTGTCCTCCCCACGAAGCTGCCGGAGCAGCAGCGAACCGCCGGGA
AAAACAAAGACCGAAGGCGATCTTGCGTTGTCGGTCCCTCTAGACCGTGGGACTGCAACC
TAGATCCCGCCGTCCCCATCATCGGCGGCGTCCGGGCTTAGCCGGCGCACGTCTCTGGGG
ACGGCGAGGTGGAGGAGAGGGAGGAGGGGGCGGCGGCCGGGGCGTTGGGGTTGGCCCCCT
GATCGCCTTGGAGGGA