Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
![](/morexGenes/blast_net_images/contig_41650_assembly3_WGSMorex_rbca.fasta-MorexXBarke_maploc.png) |
![](/morexGenes/blast_net_images/contig_41650_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
![](/morexGenes/blast_net_images/contig_41650_assembly3_WGSMorex_rbca.fasta-Morex_bigstats_maploc.png) |
Predicted Genes from contig_41650
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_57328 |
2 |
2241 bp |
MLOC_57328.1 |
Available |
Available |
LOC_Os09g12660.2, FRAME:-3, EVALUE:0.0, 13109.m01152 protein glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_57328
Contig Sequence (10004 bp)
>contig_41650 10004 assembly3_WGSMorex_rbca.fasta
ACCAACTTCACATGACTACTTATAACTAGACTTCTCCCATGTCCTCGAGAACAAAAGTAG
CTACTCACAAATCATCACCTTGTTCAAGATCGGAGGTATAATGAATATGATTAAGGATCT
GAACATATTATCTTCCACCAAGTAAAACAACTAGAATCAGCTACAAGATGTAATCAACAC
TATTAGCAACCCACACATACAATTTGAGGTTTTGAGATAAAGATTGAATACAAGAGATGA
AATAGGGTTTGAGATGATATGGTGTTGGTGAAGATGTTGATGAAGATTGATCCTCCCAAG
AAGGAGGAAGCATTGGTGTTGACGATGGATTTGATTTCCCCTTAAGGAGGGAAGTTTTCC
TAGCAGAATTGCTCTGCGGGAGAGCAAAAGTGCTCATGTCCAGGTTTCTGCCTCAAGATG
GCGGGGCTTCGTCCTGAATGTATCCTCCTGATTTTTTCTTGGTTGAAACCCTACATTAGC
AGAAGATGGGTATGAGAGGCTGACTATGGGACCCATAAGGTATCAGGGCACGCTCTGTTG
CCTTGTGGACAACTGGTGGGTCCCCTCCGGTAGTTCTTTGCTCCAATATATATATTATAT
ATTCCACAAAAATTCTCCATGAAGTTTTAGGTAATTTGAAGTTCAAAAAATTTCCATCCT
TTTCCATAGCCTTTCAGGTCCAAAATTCCAGTTTCCGGTGATCTCCATCTTTGTGTAAAC
CTTGTAAAATAAGAGAGAAAAGATATAAGGATTGCATAAAAAGGTGAAATAATTCTTGAA
AACATTATACATATCAATAGAAAATCATGATGCAAAATGGACATATCAGGAACCCACCTG
AGTCACTATCAAGGAGATATAATTGAAGAAATCAGCAATAACTGGACATCATTGGGCAGT
TGTGAAAACTACCAAGTGCAATTGATGGGCAAAGCACTAAACATAGAAACCATATGGACT
CTCATCTCGAATCAAATTTTGCAAACCATTGAATTCTCATCTCATATTTGAAGCTCCATC
ATAACCCTGCCCACATAGTCTAGAAATAGGCAAGCAAATTTGGGTCGATGAATCCCTCGC
TTTCCTTGGTGTAATCTCATAAAGAGTGTAATTATTATTTCATATCAATAAAGAGAGCCA
TGATGTGAATATCCAGTTCTAAGCCCAGGTTCATCTCCACCCATGAACAATCAATCTAAA
AATAAGTAACAAAAGTTTTAAAAAATGCATGCAAGATGATTGAGTGCGTGAAGTAATTAA
CAAATTTTAATCATTTGGATACCTCAGTAGGTACCAGCAAAAACAATGGGTCCAAACAAT
TTATTTTTATTTTTTTGTTTCATTCTATTATATTATCATTTTGAATTCTTTTATAGCAAT
TTATATTATTTTTCTGGAGTAACCTATTGATTGAGTGCCCAAAGTGAAATGGATTTCTAT
ATAATTTTGAATTTCAGAAAACCCATATCAACGGAGGGAAAAAAAATTAACACCAAGCAT
TTAATATGATTTTTTCCACATCGCAAGGAGTCTAGAAAGTGGCAAGACCTCCTGGCTGGC
CAGCCAGGGACACCCGTGTGGCTTGGCCGCATTGCCCCTTGTGCGTCGCCTTATTATGCC
CATTCGTTCACCTATAAATCATATATTTCGCAAAACCCTCCGTACCAATTTTCTACGATT
TGTCGTTGAAAGTTTGTGCTCGGTGGAGATCTAATTTGGAGGCCCATTCACCCTGGCGTA
GGGGGAATCCATAAGCATAGACTTATTTTATCAACCTTGCTGCCCCCATGACAATGTGTG
TAGTTTCCTTTGGACCTTATGACATCCTCTCTCCCTTCTGATTCAATACAAAGTACCCGT
GAGCTACCTCTCATTACCGGAAACCATATGATGTAATCGGTGTGTGTTTGTTGGGATATG
ATGAATTTCCACTTTATGATCAGATTGTTCATTGAAATATATTGAATCTTTTGACGTTTA
TCTATTGTATAATTAAGTAGCTATGTATCTCTCTGGTCTATTTATTGTCTTTGGTCTAGA
TTGATGGGTAGTTCATCAGAGGGAGTGGTGCATGTAGTGGGTTCAATCTTACGGTGGTTT
ATCCCAGTGACGGAAAGGGAATGAATATATGTTGTATTGTTTCCACTAAGGATAAAACGA
TAGTTTTTGTCACACTTGGATAACAGTTTTACTACCTACATCATGTGATCATGCTTATTA
CAGTGCTCTGTTTGTTATAAATTTCACACCCCCATGCTGGATAGTGGTCTTGAGGTGGAA
TATTAGTTATAGATGCAGTTGGATAACAGTCCACATATCACAGACGTAATGACTATATAA
GATTATAACATGAATGATCATAGTCATGAATATCAATATTGTTGTCCAAATGTAATTTTT
TCACCACACCACACTTGCCTGCTTGGAGGATGCCACTAGTCAACTTATGGCCCCGGAGTC
TATTTTCCTTCTCAAAAAACTTCACAAAAATATTATTCTTTGTTGTACCATTTTTTTGCG
AAATGTTGTACCATTTATTTATTTTATCTATCTATCAATTCCTACCATACATCGTAATTT
AATCTTGTTTGCATATCTATCAATCCCTACAATATCGTGCAATTTAATCTTGTAATTAGG
AGGACAAGAAGCTTGACAATCTTCTTGAAGTGTTGGATGAAAGTTTGTATTGTGTTTTGT
GTGCATTTACATGTGACTGTTTGCTAGAAGAACTCCTTATGGTTTGATAAACCTTGAGGT
TTTCCCATCACTCTTACGAGAGAGCAAGCAGGTGCCCCCTTGGCTTGTGGGGCAAGTTGG
GGGGCCACCGCCACTAGTTTTTTTTGGGTGTGGGGGTGTGCCGCCCCTGGACTGTATAAA
TAAAAGGGAGGGGCAGCTCCTTTGAACACAACTTTGTGTACTTGGGGTTGCGTCCTCCCC
GCCTCCACCCTCTCTCTCTAGTTATCCTCGGAAATTGTTCCACGCAGCAAGGCTGCTCTT
CGACCTCTAGTTCTCCGACATTGCTTAGTTCTGGACGGTGACGCTCTGTCGAATTGGTGG
TTCCGTTTACATGGATACCTACAGAGAGATCGTTCTTTCGATCTTCGTTCGAGGGTCAAA
ATTATCGCGACTAGGAGGTATAACCTAACTGTGAAAATATAAATCAACTCGCTTCATCAA
CTCTTCTTTTGCTACAACTCCGAGTTGGTAACAATATGATCTGACCTTTTATGCATCTTC
ATAGCGATCCTGGGAAATTGTTGTGTAGAATGGATTTTTTTAGTTTTCTATCACGTTTCC
CCATAAAATTAAGTGTGTTGTACAAGCTTCCACACTCATCCATCTTGATGGACGGACAAT
AGGAGCACGTTAGAGAATGTGAATGGATAAAAGCTCGTTTTCATTCATGTTTTAGATATG
AGATTTTGAAAATAAACACATATATATATTCATAAAATGAGAAGAGATAATCGCGTGCTT
GAACCTGGCGGGCAATCACATTAGAAATTAAATTGGTAAAGAAAAGCACATGAAGTACAA
CAAAATTTGCTAAAGGAAGCCTCTTGATATGTGATAGTACATTTTCCATTTCAGAAAGAT
AAACATGCGTTGTTTCCCTGGGATGATAAACAAAAGTGGAACCTGATTGGTTCTCACTCC
CCAGTTCCTAGCAAAAAACAATTCGAAGTTAGTGTCTTCAAATGTCAAAGATTTTAGAAA
AGAAATTTTGAAGCACAACTGTTGGATCAGATTACTACATAGCAACAACATACACTTATT
AAAATATAGATATTTATTAATGTGTCATTCATAACATGAGTTGACCGTTGTGTACTCCAT
AGCAGCAGTTGATTGCTGTGCTTCTATCACGCTCTTTTCTTCATTTGGACCCTTTTGTGT
GTTTGAATTTAAACATTTTAATTTGTAAACATTCAATTTGTAATATTCGTGGATTGTGTG
AACCTTCATTATCAAGTTTGAATTTAGGAACTGTTTGGTTCAGTTCCAGAGAAAGTTGCT
TGAGTCAGGCACCATTCGCACGCGTCTGATTTTGGAGGCCTGGGGTGGAGATCGCTGTCT
GGCTGAGCAGCTGCCTGTCAGGCCTCTATCCAAACAGGCTCTTATTATGTGTGCAAATAT
GTAGTACTTTCCCTTGCAAAAAATAATTGTAGTACTTAAACTAAAACTTAGAATAATTGA
TAAAATATTTTAGGGAGTTGACTTTTAAGGATTCCGCTAGTGACCATTTTTATTTAACTT
CTAGTTTGAGAAGCCTTTTGAGGGGCTAAATTACCGGGGATGGACTAGAGATGCTCTAAG
CGATGCAAATAAGCACCGGATGTCCAGTTCAAGCGTAGAAACTGTACAAAAGGACATAAT
TGTACATGCCAAAACATCCAGATACCTAATGCAATTCTCATACTTCAACTTCAAAACATT
TGCTCATATACTAGTTAACAGTGCAATTCTCAGTTTTATTATGGCCTTGAGTGGTGGCCA
CTGTTTTATTCTTTCCGCCGACGACACTTCCATGCAGAGATTGGTGAACTTGCTGCATGG
GAAACCAGTCATGGATGCATTGGAGGTCACGGTAATTCTGCAAGCCAACCTGCAGTGCAG
GGAAAGGGTCAGTTTCGAAAGTGTAGTATGATTGCCGTGCGTGCAAACGGAATGAAAGAA
TTAGCCACTTAAGTAAAGGCATAAGGATGCAGTTAGCTGTCCCTGGCATTTGCTAGTGCA
GTTGATCTAAGGTTATGGCACAGAACAAATTTGATAAAATAACAAAGAAAAGAGCATGTC
GGAAATTTTTGGTGGAGTGCAGAAACCATAATAAGAAGCATCAAGACAAGAATTTTTTGT
TTGCGCGAGCGAGGGTACCTCACTTATATACATGGCGATGACGGCTGCATCTCTATATGA
CTGTCCCGCTAGGAATTAAGGCGTCCTTAATCACGGTGACAATGCCACTTTTGATGAAGT
ATCCATCACTCTCCCTTGAAGCTTCTTGGATATCATCAACATTGATTATCTGTAAAAGCA
GCACACTATTTAGGATCTAACGTTACTAACCACAATAAACATGGCGTAGTATTCATTTTC
AGTACTCCCTCCATATTATAAAGTTGCACTAAGTGAGCAACCAGCAATATGGATCGGAGG
GAGTAGTAAAGTAGAGTTTTTTAAGCAAGCATACAGAATAATGCATTAGTATTTGGTAAC
ATAAAGAAGATTGAAATCGGTGCTTCAGGGCACATTCTTGCAAATATCCTATCATTAACA
AGAAACTGATAATGACCAAGAAAAATCTATGAGTCTATTTATGTTCAGATAGAGCCCCCT
CTTGTTTTCGCCCCAGAGTAATGAGTAGTTAAACAGAGCATACATGAAAATACGGGTTGA
CTGGCAGGAGGTAGAGATGTATATGAAGTACCTTCACATTTTCTCCGATTCGAGCATTTT
TGTCAATTATTGCTTTTTTGATGTGTGTATTTTTTCCAATACCGATGGGAATGCCGCCAG
TTTCAGAAAGGACTTTCTTGTCATTTTCTGTCTGCACAAAAAAAGACAACTATGTTCTCA
CAATGCTTTCATGGCGGTATTCGTTAACAGGGAGTCTGTTTGATTATATTTCACCTCATA
ATAGTCTGCACCCATTAACAGGGAGTCCTCTATTACTGCGCCTTCCGATATGCACGAGCG
TAGTCCAACAACAGAATGGTTGATTTTACAATGCTAGCCAAAAGGAGAAAAATAAATACA
AGATAATGAACTTTAGAAAGCCCATGCACTGAAGCACGAGGAACTAAACTTGAGGGAGGA
CAAGATATCCAATGGATAACCTATAAGGTCCTCAACATGTTGTGACCTAGAGTCTCAAGG
GAAAAGGCAGCTTACATTGATAACGCAACCTTCACCGATAACACTGTCAGTCACATCAGC
GTCAAGGACCTTCGAAGGAGGCAAGTATCGAGATTGTGTATAAATTGGGGCAGAACGGTC
ATAGAAGCTGGACACAAGTTTTTACAAAAAGTGAGTAATAGGTAGTGAATCTAGCAAAAT
GTACCTCCTAACATTTTTGAACTGTAGAATATCTACCTAAAATCTGGTACTGGCTTCTTG
GTTATTCCCAAGTTTGCATTGTAAAATGCTTCAATAGTCCCAATATCTTCCCAGTAACCA
TCATATAGGTAAGCTTGCACCTGTCACAGACAATATCAGTCTAAGCAAACAAAATATATG
GGATATGAACACCAGAAACAAATTGAAGTAACTACAAAATATGAAGGAGTTTCACCATGT
TTCACAAGATAAAAGTTACAGCAGTGAAAATAATAAGAATAATATGCACTACAAGCTTCA
AGAGCATAGCGTACCCTCATTCCAATTTCTGTTGCACCAGGAATAACCTCACTTCCAAAG
TCATTTGCTGAAGGAAAATTGTCACGAAGAAGCCGAAGCATCGCATCTTTGCTAAAAACA
TAGATTCCCATGCTAGCAATATAAGGCAATTCCTTGGCCCTCTCAGAATCAAGGCCCAGT
ATGGTGGTGTCAACCTGCAAGATTGTGACATGTCAACTGAAAAAACTAACTGCACAAGCA
TATATGATTTCGGCTGCTTAAGGTGTATTGTATGTTTTTTTTTGAATTAGACGCAGAAAA
TGCTACTCAGGTGCACACCATCATTGCCTTCAACTTCTCTCCTTTTGGTTTTTCTGAGAA
CTCAACAATTCTCCCTTCATCGTCAATTTTCATCAGGCCAAATGCAGTTGCGCGCTCCTC
ATCCATTGGCAGGGCAGCCACAGTAATATCAGCATCTGTTTCTCTGTGTGCTTGAATGAA
TTTTTGGTAGTCCATACGGTATAGGTGATCTCCAGCCAGAATAAGGAACTCCATAACATT
GTGTTCCTCAAACAGCCATAAGTACTGCCGCACGGCATCTGCGGTACCCTGATTTGGGAG
AAGGCAAGAGAATCAAAACTCAATGGTTCAAGAATATACTAACATAAAAAGAACATAACA
TGTCAGGCCTCAGGGGATAACATAAGGGTGTTCGCAGCATCTATTGTTATGCATCATTGT
GAACTTGATTTTTTTATTCCAGGGAAAGTGCAGGACCCTCCAAGTTCATGAACGCTCCTA
AACGATTTGTCTGAATGCTTCTAAAATATAAATTCAACTTATTAAATGTTTAACTGTTCC
CTGGAACAGAAGTACAACAGGGTGTGTAAACTGTGAAAAGAAAAATGCAGTTTAACAACA
TACCACAATCTATCAAAATTTCAGATTCTGAAGACTTTTAACACGGTTTTGCCCTGATTT
TGCATTTTGCTTATTTATGTTAGATAGGATCGGCATGTTGTGTCGACGATTCGTAAAAGA
TTGTGTAAAGATCAAAGTGTATCATTGACGATCATGTACAAACTTCTCTTGTCCATCTAT
TCCATTCCTCCTCGTCGTCCGGATATTTTTGAACCCTAGTCGTCACCTCACACCTTGCCT
AATGGAACCCATCGGAAAACGAGGGTCGAAAGCTTCTAAAAGGGATATTCCAGACAAATT
TCCACTAAACAGGGTAATTAGTGTCACAAATGCATATCTAGGGGGTAAAATGTGGAATTC
ACTCTTATTTTTATGCATTTTGCAACTACATTTACTTTTCATTTGAAGTTTTAAATTCTT
GACCTGCTTGATACAAAACTTGAGCTCTTACATGAACACAAAGTAATATTTCGAGATTGA
TACACACTATACAGAAGATGAATCTCGACCAATGTACCTGAAACCAGTTAGGATTCTCCG
GGCTCTGCTGCGCGGCGAGAACTTCAACAAAACCGTCATTCTTGTACCCGCCAATGTTGT
TCCCATAGGCCCTCGAGAGGTGGCGGTTGAGCGACGCGGAGTTGAACTGCGTCAGCACAT
AGATCTTGGACACATTGCTGTTGAGGCAGTTGCTGACCGGGATATCTATGAGCCTGTAGT
TGGCACCCAGCGGCACCGCAGGCTTGGCCCTCTTCTTGGTCAGCGGGTACAGCCTTGTCC
CGGCGCCACCACCCAGGATGATCCCAAGAACACTCTGCAGCGGTAAATGGATCCTATCAA
CTGGATGTGACATGAACATATCATGGCAAAACAAACACTCGAAACATTAACCGAATGAAC
TGCAGTCTCGGGTTTATGTACTTCTACCACAGAGTTTAATAAATTAAAATGCATTTTTAT
TATTTAGTAGTAGAGTCTTCAGATCTTGAGTGAATAATATTATAAACTTCTGAATAGAAG
GCATGGAGTAAATAATTCTAAGCCTTCCCCCATTTCATGGATCATAATCTATAGACTCCA
CCCCCAATGCGGCAGCCGACAGAACCATCGTGAGATCAACGGAAAGGCGCGAGAAAACAC
GCCCCATCTGCTCATCCAAACGCGCCAAGCAGAAGGAGTAGATAAAATAAAAATAAGGGA
GACGCATCGAAACGCCAACTCCGAGTGTGCGTGCGCACGAGCCTTTTCCCGCGTAATAAT
CACGAAAGGGACGGCTAAAAGTCGCATGATAAAGTGCGGAGGAAGGTAAATGCCAATCAA
AAAAAAAAAGTGTGGAAGAAGGTGATGGGCGTGATCGCGCATTACCGTGCTGGCGTCCGG
ATCGAGGCACGTCTGGGAGTTGCGCGAGTCGGACACGGCCCGGGGCGAGAACAGGGGACG
CGGCCTCCCCGCCACCGCCCGCAGCCGCCGCCCGCCATCGGGGGCAGCGCGGCGAGGAGA
GGATGCGGAGGGTGCCGGCGCCGGGATCGGTGCCCCGTACGTGGCGGCCGTCGCCGTCGC
CATCGCCATCGCCATCGGGGGCAAGAGAGTGACGGGTTGGGGCGGTGGCAGCGACGGCCG
AGAGAAAGTGAGGGGAGGCGGGGCTGGCGGCAGGGCAGGACAGGAACTGCTGGGGAGTGT
TGGACGGACGCTTCTCCCTTTCAGCGGCTGTGAGAGTTTCCAGCTTCTTTTTTCCGCTTT
CCGTTCTTCCTTTCCTGTCAGGGCATGGCATGGCTTGTCGGCATTTATGGTTGTGTTTGT
CCATGTGCCGCGATGGCGTGTGCGGTCCAGATGAGCCTCGGACCAACGGCTCTGCTCGCG
CACACGTGTCTACTATATCTCACGTTTTCTTTTTGATTTTGACAGGAATATTCTGCAGTG
AGCATATCTCTCAGGCCAACTTTGTTTTCTGTTTTTTGAGGTTCGGGCCAATTCTGATGT
TCACACGGTGTGTGTCTACAACCCCTAAGAAAACATATCCAAATTCAAAATACACATCAA
TTTTGTTTCTCAATGTGCACAAGGTATGCAGCGGCGAGGGCGACACAGCACCACGGTCGA
AGAGCGACTCCTTGAGCTGCCGTGCATACTCCATGTCTGTCCACGCGGCTGCGGCTCCTC
CTCGTGGTCGATGACCACCTCCTCCTTAACCGTGGGTGCAGGCGGAGTGATGGGCGCCGA
CAGGCGCAGAGAGCATGGGTGGCAGCATCACGATCCACACAGCGTCGGGATCCACTTTGT
CGGTGCCGAGAACTAGTCGAATCCATTGTCGGACTTACCCGTCTTTAGGTGTGTGCACGA
GAGGAGCGAAGGGGAGAGGGGAAGAGGAGAGGTTGCGGTGCGCATACCGGAGATGGGGTT
TGTTGGCGAAGCCACCTTGCTTAGATGGACCAGCGATGGACCGGCGATGTCATGAGATGG
ATCGGCGCCGCTTCATTGCGTGCGTAGTTGGCGGAGTAGACTTCTTGGTCATCATGTTTG
CAGTGAAGAATCATTGGTCAGTCGTCAGGTCATAGCGGCATGATCGACATGGATGCATGC
AGGCGGTTGTCCGACCCTATTGTAATGCCCTCGATGTGATCATATCCTTATTTTGGCACG
ANNNNNNNNNNNNNNATATAAGCGCATCTCGTCGTTTCACAAGANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATGAGTATATGAAATTGGCTTACAATC