Contig Data
morexGenes
Links



Map Locations of contig_41641 (4267 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41641

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57322 3 3474 bp AK248364.1 Available Available None





CDS Structure of MLOC_57322






Contig Sequence (4267 bp)

>contig_41641 4267 assembly3_WGSMorex_rbca.fasta
GCCTTTCTTTCCTTTTCCTTTTCTTTTCTTTCTTTTGAGCCCCTGTAGCCTCCTTCTCGA
AGGCATGTACTGTACATATTCTCTCCCTTTTCAATGAAAAGAAACGCAAGCCTTTGCGTT
TTCCCGAAAAAGAAACTCAACAGTTGAAAAAGGTAAACTTAATTAATGCTCCTTTTTTGT
ATATTTATATGTAATTTTTGTTTGAAACGAGTATTTATGAATTTGTTTTTGTTACACTGA
CAGTAATATTAGACATACAAACATGATTTAATTTTACTAAAAGGAGAGGTGGTAGGCAAC
TTCCTGTAATTGTTTCCTCAAGTACAAGTGGCTAGTTGCAAACAAAGGAAATGGTAACAT
ACTGACATGGGAAGCAACTTTAATTCTTCACTGAGAAATCAAAGAAAAATTAGGTCTTCA
AATATATAAAATTAAAACAAAAGCTACGCCCATGCAACTGGAATCACAAGCCAAACAACT
TCTTTGGTAGTGTTGTAATAATTAATTTGATACTGACCTCGAATGAAGACATCAAAAGAG
TTGCTGTAAGCTGGATCATCGTAGCAAGGCATGGTGTAGAAAGGGCGCACAGCCAAAGGA
TATCGATAGAGGATGAAAAATTCTGTGCCATACCTAGAAATGAACAGATAAGTTAGCATG
TTGAAATTAAGTGATACAGTTACATACGTGCAGTAGATCTACATACTTCTCCTTAACAAG
CCGACCAAGTTTCTTCTCAGCTTCAGTGTTAAGGTCACCCATAGGCTCAATTTCAGTTCC
GGCTTCCTGCCAAACAGACAAGTCATCCATAAATCTTGTCCAACTGAACTAATAAGTAAG
TTCTCGGTAACTGCCAGCTTTTCAGCGGACCTGATTTCTGAAGAAAATTAATCCCTTGTT
TCAAAATGTCAAGCACATCCACCCATGATGTACTCTAATTATTATTTTCAGCTACAGAGA
AACCATTCTGCTGGTGATGTCATAAAGGACTGCCAATTTCTACCGGTTTTTCAGCTAACA
AGAAAACATGATAATGGTCAAGCTGGAAGTACCGGTTGGTAGATAACATTTGTTCAAAAC
GAGATGTCAATACACACTTCAAACTGGTAGGAAACATGCAAAATATAGAACACCAATTCA
TATGTGCTGCACCACTGCAGTACTTAGTATTATTCGTAATTTGAAGATCATATAACCACT
CCAAACAACTATCAACAGTATGTTTCTTTTTTCACAGGAATCTCAATTAGGACAGCTCAG
TCAAAACACCAGTAATATATGGGGCTATTAAATTTCCAACATCAATCACACTGTGAGAAC
ACAAGAGCATACTGCATGCAAGTGAGCGTCAACATAATGATGAAATAGACAAGAGTACAA
GTTAGTACCTTCAGCATTTTAATCCCTTCCTCGTACGTCAGCTTCAAGGTTTTCTCTAGG
TACTGTATAAAGTAGAAGAAGTTGAGACAGTAACTTCAGCAAAAGCATACATATAACAAC
ACAAGACAATAAGAAGTAATGTTTTACCTTCAGAGGTTCAAATGGATACTGCCTATTTAT
TGTCTCAAGTTCCTTCTGACAATTTTCATTCAAGTGTTTGAATATTGCTACAAATAAGCC
ATCTATGATATCACAAACCTGTGTACAAAAACCAGTACCTGGTCACCATCACTTCAATAA
ATGAAATAAATAAAGACTTATTTCCTCCAAATCTTCCTTACCTCAAAGTAGTGCTCCTTG
ATCTCCATCTCAGCATCCAACCCAATAAACTCACACAGATGCCTGTGAGTGTTTGACTTT
TCTGCTCTAAATACAGGACCAACCTCAAACACGCGGCCAAAGCCACCACAGATGCTCATC
TGCTTGTATAATTGGGGAGATTGTGCTAAACAAGCAGGCTGGCCATTGTACTCCAGCTTG
AATACAGATGCACCACCTTCACTTGATCCACCAATCAACTTTGGACTGTGGATCCCGATA
AAGTTCTCCGAGAACAAAAATTCTCTGAATTTCTGCATGCGTATCGAGCAACCATTACAT
GTACAAACCAAAAGAAGAAAATTAACATTACATGCTACAGAAAGACATGATAAAATCTAT
CTGCGTGAGATGCCACATGAATGTCACGAACATAAGCATAGTTTTGATGAACAATATCTC
ATGCTGCATGTTAAATACAGGTTTGTGCAAGATGCCTTTTGCTGGTAGATGGAGATACTA
AGATGAAAGAATGACAGGTGACCGGACCTTCTTTTATATAATAATAATAATAACAGCGCA
CGCGGTGCTAGCCGTAACAGAACATGCTATTTGTTACAGCAGCATGCCTTACTGCATGAA
TGGTAACAGTCGGTCGGTATAAACAAGGACTAATAATACTCACGTTCTCAACATGGCATT
GGATGCGGAAGATTGCTTGATTCGCAGGTGTCCGTAGATCGATAGCTCGATAGTTCAAGC
GTGTGTCCTGAAGAACTCGTACCAGCTTCTCTCCATTCTGTAACCATGGCAAGGATAAGA
ATCATAGAGCAAAAGCTGGGACCTCCTGCAAAGAGGAAGAAGGCGAATGAAAAGAATTTG
CAACGGACGTACTTGTTCAGCCTTGTCGAATTCTGCTTCACTACGGGCCGCATCCTCAAG
GTTGATCGGAAGTGTGGGGATCGCCCTATTGATGCAGTAGACCTTCCTAACCTGGATCTC
AACCTGCCCGTCAAAGCGAACACACAAACAATTGATGAGGTAGGCACACTATAACACACA
AACAAACAGAAATTGTAATGAGCATGCACTTCACATTCTAAATTAGGCGACAACAATTCG
AATCGAATAAGGAAGGTTACAAAACCACCATCTAACAATGCGAATGATGGTTGCTACCGA
TGACGAGAAACAAGCAAAATGGCCCACATGACTGACCTGCTGTGTTGTGGCCTTGAGGGG
CTCCTTGGGGAGGGTGACGATGCCCTCGACATCGACGATGCTCTCCTTGCTGAGGGAGGT
GGCGAAGCGCACCATCTGCGTGCTGACGCCGGCGTCGGGGCTGGCGACGAGGACGCACTG
CACGGTGCTCATGCTCTGGCGCAGCACGACGAAGGCCATCTTCTTGCTGACGGGGCGCAG
CGTCTGCGCGGAGCCGCGGATGAGCACGGAGCGGCCCGCGGCGGCCTCGTCGAGGTCGCC
GATGTCGGTCCAGGTCCTGCCGGAGATGACCTTGGACTGGATCTCCTCGACGGGGACATC
GCCGTAGTTGGCCGCGAAGGGGTCGGCCTCCTCCGCCTGCGGCTGCTGCTGCTGCTGGCG
CTGCGACGCCTTCCCGGCCTTCTCCGCCTTCCGCGCGTCCTTCTTTAGCTGCTTCTTGCT
GATGGTCGCGGCGGACAGGTCAGCCTCGAGCTCCTCCGTGGAGGCAGAGGCGGGCGCGGG
CTCCGACGACATCGCGGCGGTGGCGGGCTGGCGGCGAGGGGAAACAGGAATAGGGTTTAG
CGTGGTCTGGTGGGATGGTGGTGGACGGGGTGACCTTGACGACCGGACGCCCTCGATGGA
CCGGGCTTAACTTCAGGTTGGTGTGTAAGCCTACCGGCCCAGCCCGTCTGACGTTCTATA
GGCTTTGGCGGCCCCCGGAAAAGGAACCTAAAGAATTCAGGTCAATTCTTTCTGAGAAAC
ATGTGAACGCGAAGCAACAACTTCTTGCCCGGAAATGGTATTGGTAGAATGTGTCGTCGT
TACCCGGTATTCATAGATTCAGTTTGGCTTTGCTGTGGGCGGTACGTGGCGAAGTTTGAC
GAGGAAGCAACGCACTTGTCTTGCTCACGGGATCGTGCTGGGTTCATTGGTCTCCCGGGG
TAGCACCACGGTTTTGACCGCGACGACGGCCGTGGAATGAAGCTCCCCATGGATTTGCAC
CACAGTTTTGTGTTTCACGCAAGTCGGGTTGATTCTCACGAGGGTGGGGTATTTATATCG
TGTTTCTCGCCCGGGTCCACTTGCAGCCTGACTCGCCCCTTTTATAAAAAAAATATTGCA
CGGAGAGGGGGGCACGCATGGTGTTTAGTTGATGGCATCTTCTAGGTAGATGTAGAGTGT
GTGGTATTTGGTTACATGTAACACATATCATTTAGTAACCTTGTTGAAGTGGTGAAGTTA
CTAGCACAACATAGATAAACGGGCAAGCCCGGGGCAGACCAAATTAGCATAACTCCCCAT
CCCTCCCCCTCCCAACCCTAGCCACCCAACTCCCTCCCCCTCCCTTCCTCGCCGTCGCGT
GAGGCAG