Contig Data
morexGenes
Links



Map Locations of contig_41626 (5956 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_41626

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57302 9 2524 bp MLOC_57302.1 Available Available LOC_Os02g40450.1, FRAME:+3, EVALUE:0.0, 13102.m04507 protein DEAD/DEAH box helicase domain containing protein, expressed





CDS Structure of MLOC_57302






Contig Sequence (5956 bp)

>contig_41626 5956 assembly3_WGSMorex_rbca.fasta
GTCCGTCAGGCCTTGCCGGACCTGGCCTCTGATACCATGTAGGAACGGGAGGGAGAGAGG
AGTACCTCCAGCAGCTGTGTATTTTGTGTGTGGCGGCTTGGGATAGGAACGGGATGGCTG
GGAGCATCCTTTTTAGGTCAGTCCCACTACATGGGCGGCCCTGGGCCCTAAGAGATAACT
TGTATGGGCTGGGCCATACCGGTTCAACAATTTGTCCTCACATATTGTACTTCATTGCTA
TTTAGATGTTGCAGTGTTCCACTCAGTTGCATATGTGTATGTATTTCATTACATCTGCAC
ATCAAATTACACTTTTGACATGTATCTTTCTACTCAGAACCTGGGAGGCTGATGACAAAA
TTCTATTTAAAGTTTGACACGATGAAGCTTATTGTCAAAGCTTCTGCATGTTGCAGTATG
GAAGATTTATTGCATATCATATGCCGCTCTGCAGAGATTTCTTGTAGGTAGCTCTATATA
TTTGTTTTCAGATTTATTGCATATCATATGCCGCTCTGCAGAGATTTCTTGTAGGTAGCT
CTATATATTTGTTTTCAGTATTTTAGTTTGTGTAGTGAATTAGTGATTTGATTTTTCTTC
TTCTGGAATTTCAAGGGATCCAACTACGTCGAAATGAGAAGAAAACTCTAAATGACATAA
ATTCAGATAAAGAGGGAAGGCTTCGATTCCATGTTCTCAGTGAGAATGGAAAAAAGAAGA
AGCGTATCCAGACAAGAGAAGATAAAATATTTGTATTAGCGAATGACTATTTAACTGGGG
ACCCCTTGATGCATGATTTATCCCTCAACCAGGTTGTTTGTTTGTGTAGCTTTAAACACA
TTTTAACATTATTTCCTTTCCTTCTGAATTTTTTGAACTTCTGCGTGCAGGAAACAAATT
CAATATGCTCAAATGGATGTAGGATTGCCAAATGCATGAAAGAATATTTTATATACAAAA
GGAGTTACAGATCTGCCGTAAATTCTATGCTCCTTGCGAAATGCCTAGATCAAAAACTTT
GGGAAAGCAGTCTATTTTTACTCAAACAACTTCCTGGAATTGGAACTGTTACAGCAAAGG
TTATTCATTTTTGAACCATAATTATTTAGGCACTCTATATAAAAACACTGCATAATTGAC
TGGTGAGTTTACGATTGCTATCCTAGGCACTCAAGACTGCTGGAGTTGATTCCTTTGAGA
GCCTGGCAACTGCTGATGCTAGAAAGCTAGAAACTGCAACGGGACGAAATTATCCATTTG
GAAATCAGATAAAGGACTCCTTGTCGTCATTACCGCCAAAAATTGACATACAAATTGAGG
TCGAGGATGCTGGAAACAGACAAGGGAAATCAACCATTACCGTAACACTAAGCCGGCAAT
CACAGGCAGTTCGATCCAGTAAACAGAACTATTTTGACATGGTACATCTTTTAGATTATT
TTTTATCATCCAATGCTGCTTAAACCTAAAAATTGTTAAACCATTGTTTGTTAGATTGTG
GGCTCGGAGGAAGATAATATGATCCTTTTTCATGAAAAAATAAGGTCAGTGGTTTTATTT
TATAATCTTGGTGTCCTTTATGTCCTTTTTCTTCTCCTGATGGGTAGTTTTGTTTTGTTT
TGGTTATTCCTTCCATCATTTTCAACTCTTCTTTGAAGGGCTCAAGAGTTTTCCAGGTAA
TACTGAAGTCCTGTTATTTCAGCAAACATTTGGACCATTGTTATGTAAGTAGATAAGCAA
CTGAACTCTAACTGCCCTGCTATAAGTTGGTACATTGTCAAATGCTCTGTTGCTCCTTCA
AGGAAGATATTCTTTTTCTTACATTTGTATTTTCAATAGATTATTCTAGCAGGGTAGCAG
AATCTGGTAGTGCACCTCACCTTTTTAATTAGACTGTTACTTGTTCTGCTAACCACCAAA
TAGCACCTATGTTTGATACAGCAAACGAACTTAGCACAGTGATAGCAGAGATGAATAAAA
TGGCTCAACTAGATACCATCGTTCAAGGATATTGCTATTCTCTCTGACACCCAAATCAAA
GCTAAGTTGCTCTTAGCTACTCTCACTGGCTATTCTGTTAAATGCAGCCCATATTCTGTA
AAACTTTTGGTGCCATGCCCCCAGAGTGCCAGGGTGACTCTGAAGGTTGATCTGATTTTT
GAAGAACACGGTAATGTCTCCAACAGATAACTATTGTTTGATAAATAAAAGGTTATTTAC
AATTTTATGCTGACATATATTGTGCATAAAATTTTATTTTGAAGTTGGTATTGATATCCA
CAAGAAGCATGTGGTCAGCAGGGAGGATGATTTGCATGTGACAAAAGCGTATGGGACAGA
AAAGCCAAAACCCTTGTCCAGTCTTCCTGCTGATATTTGTTCGGTTAGCTCCAGGACAGC
TCGAACAATTCCAGCTCAAGCTCATATTGGACGGAGCCCACTATCGAAAGAGGTTTGTGT
TATAGAAGACGATGATGATGCCAACGTTCCAGACAAAGCTGACAATATGCCGAGAACGAG
AACATTTAACAACTTGGCTTCACTGTAAGTTTATAACCTACTATATGCACTCCTCCAACA
ATTCTAGAATTGTCTTGCATTTATCAGTGTAGCCAAGAACAGAACACTTGCCTAATTAGT
CACTAATCTAGTGTTTAGTACAAAAAATATCTGCTAGGGTTCTTTTGAAGCAAATATTTG
CAATGTTGCCTTATGTCACCAGAGAACTGCTTTGGTTGAAACTTTGATGACATGTCAGAT
TTTGATCTTTCTTCCATGTTCTTTGAACCTTGTCTGAGCATTACCTTGTCTGAGGTGATA
TTTTGATGACTACAGAGAGGTCCCCAGCTTTGACTTAATGCTTGAAGAAGATAATGGAGG
TAACACGATGCTAGAAAACTCCATACCTTGCTTTGTTTCACTTGCACTTGAGTCAGCAAG
ATCTGCTTTATGTACTTTGCTAAGCCAAATGTTTATAACCATTCCTAGATATGCAAGATG
TATCATTTCCTGAAGCAGCAAAAGCAGAATGCAGAAGTGCCAGTAGCAGCACAATTTTTG
ATCACATACGCAAGAAATCCAGAGATTTTCCAACACTGATGTTGTCAAAGTCGATGGATA
GCTCATATGAACCTTTGATACTGAAGAAGATGAAGACATCGAGGGACCAGTTTAACTTGG
ATCAGGGAATCCTGCATGCGAATGAGGTTACACCAATGGATTCTGAACATTCCGAGCTTA
GAGTCTCTCCGACCAATACATCCGAGAAGTGTCGGATGATCCTGAGCAGAACTTCAGAGA
TGGGCCGCTCTCTGTTTGCAGAGAAAGTTTACAGCCCATTTGAGAAGAGCAAGAGCCTGA
ATAGAATTCCAGATGAAAACTCTGTTCAATTTGCTGACAGAAGGGGCAGCCTGTCTGAGA
AGAGCAAGAGCCTGAGCAGAATTCCAGATGAGAACTCCATTCAATTTGCTGTGAGAACTG
ACAGCCTCTCCGAGAAGACCAAGATCTTGTGGACAGCACCAGATGAGAACTCTCATCAAT
TTGCAGGCAAAAGGGACAGCCCATCTGAGAAGAGCAAGATCCTGATGAGACCTCCAGATG
ACGGCACTCTTCATTTCGCAGGCAGAAGGGGCAGCCCATCCGAAAAGAGCAATGTCTTGA
GCAGAACTCCTGATGAGACCAGTCTCCAGTTTGCAGCTAAAAGGGACAGCTCATCCGCGA
AGAGCAATGCCTTGAGCAAAACACCTGAGGTGGACTCTGCTCAGCTTGCAGGTAGAAGGG
ACAACCCGTCGGAGAAGAACAAACTCTGTTCCAGCAGCCCCTTCCCAGATTTCCAGGCTA
TGAAGCAAGCTCCAGCCACAGTTCAGCCTCTCAGGATTCAAGACTACTGCAAGGATATAT
TGGCGAGTTCAAAGGGCAGTGGAACTGGCGAACCTTTCCTTGGTTTCAAGAGTGTCTTTT
CGTTCCTCTGATCTTGTGAGTATCGTGTACAGGTCTGCTCAATGTTGTGCTCGAAATATG
GCACGGTGACCTACCAGAGGCATTAGCTTGACAATTTCTGATGATTACTAGTACAGTAGG
TTTTATCGTACAGCATTATATGTTGGAACACCTTTCTGTGCTGTGTACGAATGGTATGTG
GATATAATGCATACTGTATTAATTAAACACAATGCGTTAAGTGCAATACGCCTCCCTGTC
GCGTACAAATTTCTGTCTCTGAAAGGAAGTCATGGATGGACATTACAACTCGATGCTTAA
TTTTGCAACGATACTCGTCATAAAATTGTGTTTTCTGTTTATACCTGACTCTTCTGCAAA
CTTAACTCCCGATAATTTCAAGGTACTGAGAGGGGTGCAACTAACCCAACACCTCCCAAT
AATTTTGTGTTGCTATATCTCTTATCCTTTTGCATATAATAAACCTCATTTCAACATACT
CCCTCCGTTCCTAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGGAGCA
AAATGATTGAATGTACGCTCTAAAATATGTCTATATACANNNNNATGTAGTTCACTAGTG
AAATCTCTACAANNNNNNNNNNTTAGAAACGGAGGGAGTAATATTTATCCAAACCTTGAT
GTTCCTAATGAACACATAATGCAATTTTCTTATTGGAATTCAAACACAGTTTGCGCAAGA
ATTCAAGTCAAAAGAATCAACATAGATCATAGTCATCATCATGTGCTGATCTGGAGCTTA
TACTAATTATGTGCCTCCCTAATTGTGGCTGATCTGGAGCTTATACCCGTTTCAGAAAGT
AAGTCCCTCCTCTGTTTTTCTGACTGTTGGCTGCTCATTTTTAACTACACCATTCTTTCT
TAAATGACCGGCAGAACTCCTGCCAGTTACACCTACAAAATAAAAGAAAAGGGTTAAATT
TGCTCATATTAATGTAGACAGGACTTGATCCAACAAATAGAGGAGATGTAAATTGAAAGC
ATCAACTGATAAATGCCAAAGGTATGTGAGGAGAGTTGTCTATGTGAGTCAATGATTGAC
GTATTTTCTTGCATGATGAAGGCCCCATATCTACGTAGAAGATGCATCTGTGCATCTTGT
AGAGTTTTTTTTTTCAGCGAGAATAGTAGGCGAGTGTCAATCTGTTGCCAGTCCAACGAT
TAGCAAGGTTGACAACTTTGTATGCTCGGTGGGTAAGATTTTATTACTCATTTGACTTGT
ATTCCCTCGTTCCTTTTAGAGATTTCACTACCAGACTACATACAGAGCAAAATGAGTGAA
TCTATACTTTAATGTATGTCTATATACATTCGTATGTAGTTTTCTAGTGAAAACTCTTAA
AGAACTTATATTTAGGAACGAAGGGAGTAGAAGAGAAAACTTGGATGACTTATGATAAGA
TCATCTCGTGATACATTTGTCCTCTGTTCGCTGAACAAAGAAAATGAATTATTTCGGCAA
CACCATTTTCATGTAATTTGTGCAAAGCAACCTTACTAGAGAAGTAGAGAATGAGCTTAT
GTACTTACGGATTAATATTTTATGTTTCTTGCTTTTGTGTCAAAATGAGATAGAGTCAAC
TAGAACTACAACTCAACAAGTTTCTCAAATAAAAATCTACAACTCTACAAGGTACAAGGG
AGCGAAGAGGGGAGCCAAAAATCCCGTTGAATGGCTTCTTGATTTGGATTAAGGCTAGAG
ATATCTCCAACATGTGCTTGTGTTTTCTCCCATTTCTTTTATTTATCGGAGCTTTAAATA
GTTGAATTAAAACCACGACAAGTATTTTGAAACAGAGGGAGTATTTTACCGGTAATGCCC
GAAATCTTTCTGGAAGCCAAATGTAACTTTCCTATATATCAATCTTNNNCTCCGGACCAT
TCCGGAGCTCCTAGTAATGTCGGAGGTCTCATCCGGGACTCCAAACAACTTTCGGTTACC
AACATCCATAATTCAA