Contig Data
morexGenes
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Map Locations of contig_41624 (3390 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_41624

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57301 6 1118 bp AK376176 Available Available None
MLOC_57300 1 422 bp MLOC_57300.1 Available Available None





CDS Structure of MLOC_57301






CDS Structure of MLOC_57300






Contig Sequence (3390 bp)

>contig_41624 3390 assembly3_WGSMorex_rbca.fasta
TTGGGGTAGGCTAGAGGTGAAACCCGCAAGATCTCGCGACCAACTCATGGTTCTGGCACA
TGGATAGCAAGCTTCCACACACCCCTGTCCATGGCTAGTTCTTTGGTGAACACTTAAAAA
AAAAATCTCATGGAAACAGTGTACAGCGGGAGCATAGACAAACTAAACAGAATCTAAAGG
GAAAATAGTTGAAGGATGCGATAAATGGCATCTCAAACTTTGTAGCACCAGAACAAACAT
ACATTTAGATAAGGACTGTACATATACCTCAAAGCGAAGCATGATGAACAGTGATGTCAT
CATGGGAAAGATGCAAAGAGCATCAGGGGTTGTCAGATCAGTAAACCATAAAGCTCCACC
CCCTTTTAAAGATGGAACTTTCTCAACCATGTTTGATATCTAGAAGCATGACAGAAAATT
GAAATGATAAGAAATCTGTGAAAATGGAAACAATGAAGATGGTTGTGGTGGTAAGAAGTG
ATACATAAAAAATTGTTCAGCATGTGAAATCAACTTACAGCACGGTAAAGAGTTATAAAG
GTATATGGTGTCGCAATGATTTGAAGAATTGGCAGAAAACCAAGCCTGTGTGAACAAGAG
CGAATATTTAGAATTTACAGAAACCCATGGAAGGTCCCTAAAACAACAAGTAGGAGCAAG
ATAAGTTAGATGTTGTTTATGGCATGCGGTTAAATTTGTCAGTCAAAAGGAATTTTAACG
CAATAAGAAACACAGAAGTCAGGGGCGACAATTTGGAAGGGAAATGCCAAACAAGCTACA
CAGCAACATGAATTATTACTATATTGGTTAGAGCCAGGCATTCACACCACGGCACCATAG
GTACAAGGCAAACTAGGAAGTTTGCACATGCACTCTACTTTTTACAGTAAATAATCAAAT
ACCAAAAGAAATTATTTTCACCAAACTGTCCAGCAAAAGTGACCCGATTTGCTGAAGGAG
GTATGGAGTGTGGACATTATACAACTTCAAAAGTGTTTGACTGGAACAACACTATTTTTA
TGTTTGAAATTGCAAATGCAAGAACACAAATAAAAAGGGCCTAACTAAGTTTCCGCGTTC
ATATATCCAACTTCAATATTAGAAATGATTGTCAGTCCCATGATTTTCCATACTTTGTTG
CAGTTGGATGCATTTATGCCTGCCTGGGGATGTATGATGATATATCAATCTACAGGGCGC
CGACAGTAATTGGAAAGGATGAGTGCAGTTTTCTTGATATATTGTGCTGTACAGTGCACA
GCCCCCAGCAAAGACAGGTTCTATTAGTATTTTTCTTAAACTGCGTTGTCTCCTAGGCCA
AAATCATTTCATGTCTCGGATGAAACAAACTAACATCTTTTTCCTGTTGAATAACTTTTA
AGCATATATGTGTCATGATTGAACACTGGAAAGACAGAAGATTGGGGAACCACAAAACTT
CTTTTTCTCTCTTTCATGTTAACATTAAACATCACACAATCTCTTCTTTCATCCAGAAAG
AACCATTTATTTAAGGATATTTACTCAGAAAGAAAACATTAGCGCTGGCAATAATGTCTC
AATACAAACGCAACTAAAGCATTTTACATACTTTCTGATCATAGGCTCTCCTGCATCTTC
AAGTTCTTTAATTGATTTTTTACCCTTAGACTGCAGGAAATAATTGTGTACAGTTAAATT
TCTTGACAATAGAATATGCCGATTGTACAGTGCAATAGTAGTAGTAAAAATCTAATAATT
TTTCGCTTCCCTTATTGCAGGGATCTTACATACATCCTTTACCAACTTGAAGAATTGAAA
CAGCTCCTGACGCATCCCCTATGTAAGTTTGAAGCATTAAAGAAAGTAGGGTTAAGCCTG
TGATCAAAACAAAATTCTTCAAAGTAAAATATGACAACTGAATTTTATTTCAGTTGGCTC
TGTAGTGAGTTAGGCACTTTTACAATGCATGGGAGTTCTGCAAGAACTTCATACGAAACA
ATTGAATTCTACAGGATACCGAAGAGGTTCTCACATTTCCCAACACACATTTTACTCAAG
GATATTGCATTATAGCACAGGGCACACATAAACTAATGGATAACACACATATTCCCCATA
TGTGAGTTTTGGGTTTACAAAAAGCTGGCTGATTAAACCTACCGCTTTGTTATTGTTGCC
TGGTTGGTGGGATTAACCCCGAGCAAAGAATCTTAACTTTACATGCAGAAATTTGGTTTA
CTTCTCACGACCAAAAGATGGGATAAAATCTGACTTGCGACTAATTGGGTACAAGCAACT
TCTGACTATACAAGATACGAGCCTGCTTACTTATAGCGCCCAGTATAGATAAGTGTTCTA
ACATGCATAGTAAAGTACTCCCTCCGTTCTATCATGGAGTATAAGACCTTTTAGAGATTT
CAATATGGACTACATACGGAGCAAAATCAGTATGTAGTTCATATTGAAATCTTTAAAAGG
TCTTATATTTACGAAAGGGGATAAAACCAAAGGGAGGAACATTGGTAATACTTAAGATCT
TACATATAGTCGTTTCCTGACAAGCGTCGCAATTGTGAACATCCCACAGCGTAGCAGCAC
TGTGGAGAGAGCAATAGAAATCCACCTGTAGTGAAAGCAATAAACAAGGAACGTGATGCA
CACACGGGAAACGAAATTCTGAAGACAAGGTAAAAGGCGCAAATTCCTCAAACCCCTAAA
CCCTGACCAGTTCAGACCGGTGACGGAATGGACCGCATCGATGAGATGCTGCACCGCCGC
GACGGCCATTGACGAGTCCTCCGCGGCCCATGCCACCTCGCCGGGGAAGCTCGCCGGGGC
CGCCACGGACGCTGCGGAATGGGCGGCATCGGTGAGGCCGTCGGTGAAGCCGGTGTCGCG
GGAGGAGGAGAAGCTGCGGCGGGATGGCCCGGGGAGGAGGTGAAGACCGAACGGGAGGAA
GCTTAGGGTATGGGGTGTCCCGCGAGGGGCGAGCGCGAAGTGAAACGGCCGTGGTGCGGG
TGGGGGTGGAAGGGGCGAGGGTTTTCGGGGATCGCCGGTGGGGTTGGATGGAAGCAGTTG
GGGGAGTGACGGATGGAGGCGGCGGGCGAGGGTACCGGAGAGGCCACCGGATGCGAGGCT
TCTGCGCGCGGCCGCGGCCAACGCCATTGCTGCTCGCAGCGCGGTACGGCCGAAAGAGAA
GGGTGAAATTCCTTCTTCTTTTTTTAAGCTTGGAACTATAGTTGTTTGCCCGTGGGTTTG
GGCAAAATTGACAAAAATGATCCATGAGAGAGTGACCCCTCGGGAAAAATATTTCACCCG
TCTGACCATTTTGTGTGGCGCCCACATCTAGGCGCCCCCACTACACTGTGTGATGCCTAG
CCGTTCGACGCCACACCCCCCGACCTGGCA