| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_414576
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57143 |
1 |
818 bp |
MLOC_57143.1 |
Available |
Available |
LOC_Os12g34510.1, FRAME:+2, EVALUE:1e-54, 13112.m03522 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
CDS Structure of MLOC_57143
Contig Sequence (3683 bp)
>contig_414576 3683 assembly3_WGSMorex_rbca.fasta
TTCCCCGCAAAGGGAAGGAACTTCGAAAACACATCGTCGTCTTCACCGGTTCCACTTGTG
GTTACTTCTTACCTTTACTTGTATTTACTTCTTGCTTATTATTCTTGTTGTTAGCATCAT
ATAGGTTCCTCACTTATTTGCATATCTAGACATCCTTTTTGTTGCTAAACCTAATTTGTT
TAAAGAAAAGTTTAAAAATTGTTAGTTGCCTATCCACCCCCCTATAGTCAACCATATCGA
TCATTTCAACAGCAAACACGCATGTGTTCATGATCCTTGCAAGTAACGCCAACCTTAGCA
CTACCCACTAGGGTGAGGTGTTCCTCTTGCCCGGAGTTTGTTGATGACGATCTTGTTGCG
GGTGTAGATCTTGTTGTTGACGAAGGTCGGACCCCCCCGACGTGTCTTGTTCAGGTGGTT
GTCCCCTCATCTCTCAACCTGACGTCCAACGCTTTGTGCCTCCATGGTCGCGACCTCCCA
CCTTGCTCGATCGGACTGCCCGTGCCGGGGGTTCATGTTGGTGGAGTTTTGCCCACCGTC
GTCGACGTCGCGCGTCCACACTAGGTTGCGACGTGGCGAGGATGGATAAACTCATGGTGA
AGTAGCAGCAACTTGCACAAATGATGTGTGGTCACCCCCACCTTCCCCTCCCATGAGCCA
AACGAGGAAGAAACCCTATGCGAAGGAACCCTAGGCGGCTCCCGAAAGTGGTGGAGTAGT
AGATCGAGATCTGGAATGGGAGAGGAGGGGTGTAGGGGTCAAGTACCCCCTTCGAAAGCC
TAGCCACCTGCCCTAAAGCACACGGGCCCTCCTGGACCGGGCTCACGACTTGTCGCGGTC
CCGCCATGTCGTGCACCTCGGGACATGGCCCGAGTACCCCTGGGTCGGACGTCAGTATGT
GCACATGACCCACGACCACCGATTCACCGTCACTGTGACAACACCGCTCATCGACGGCGC
AGATCAGCAACCATGGTCGGTGTGAGGGGAGGGAGAGGAGAGGGAAGTGAGGAAATCCAT
CGTCCGTGTTGTATTTCATTAGTGTTGTGCACTCCTTCACCACGTGCGCGCGTACTTCAT
CGTATCCCTCTCCCCGTCGTCTCGTCTTCTATAAAATATTTAAGTATGGGAAATTCTAAT
CAGCGACGCCGCACTAGGCCGTTCGGTGCAGTGGCTTGCGCCAAGCGCTGCATGCATGCA
TGCATTTTCTCTTCATGTGGTTACCATCCAATGTCCAATGTAATTTTATGTATATATAGT
GGACTTGCATGTTTGACGGAATCTTCTACCTTGTATTGGCATCATAAAATTATATTATTT
ATTAAAATTTTAAAATAATTTATCTCACAAACCAATAATTCGATTAGAGTTCAGTTTCCA
TCGATAGATTCGTCTCGATGAGCCTTTAAAACAAGATCCTATATTGACATGTTTTGATGA
TTTTTTTCGTTTGTTACCGGTTGCCATAATTACATCATCATAATTGTCATATTACACATG
TACAATTGTTGTAAAAATTATACATAGTTATAGAAATATATTTTTAAGCATTGCACTTCT
GTGTGAAAAACACAAATCAAAAAAATATTTATTGATGTCATACTTTTGTATCGCTCCATG
CACGAAAGAAATGGATGAGAAAAAGCCGCCACATCGGAAGCCAAATATGCGATGCCGTTG
TATAGTTGGATCGTTTAAGTATATATTACTCCCTCCGTTTCTAAATATAAGTCTTTTAAG
CAATTTCACTAAAGGTCTATACACGGAGCAAAATGATTGAATCTACGTTCTAAAGTATGT
CTATATATATCCGTATGTAGTCCATTAGTGAAATCTTTACAAAGACTTATATTTACGAAC
GGAGGGAGTAACATTTAACTTTAGACAAAGGTAATATGGGAAATAAATAGAAACAGAAGG
AGTAGGTCAACACGTCATTGACGCATGGGCCCATCTTGGACGAAACAATCCCAAGCCGAG
AGAGTTCGCGTGCTCTCCCCTCCTCTAATCACTTTCCAAACTTTCCCCCCTCCCTCCAAA
CTCCCGATCCGCGGCAAACCCCAAAATTTCCCCTCCACCTCCTCCATCTGACGGCATCGG
GGCCCTCCACGTCACCGATCCACGGCCTAACCCTCCCCACCAATCACGCACCACCTCCTC
CTTCTATATAATCATACCACCGCCCACGCGGGTACACCATCTCCACATTCATCTCTCAGC
AATCTGTCCGACTCCGGCCATCTCTCCGGCAACCACCGTATCCGCGCGTCCACCATCCGT
AGCGACCAGAAGATGAGTTCTGCCGGCGGCGGGAGGGGCAAGGCCAAGGCGGCGTCCAAG
ATCGTCTCGCGGTCTTCCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGCATCGCCAGGTAC
CTCAAGATCGGCAAGTACGCCCAGCGCGTCGGTGCCGGCGCCCCCGTCTACCTCTCCGCC
GTCCTCGAGTACCTCGCCGCTGAGGTAACCACATCAACCCTCTCCGCGTGTCGTTCCCCA
TGGACGTTCTCCTGTTCTGTCCCCTCACGGCTATTCGATTCTTTGTCTTCTTCTCTTCAG
GTCCTGGAGCTCGCCGGCAACGCTGCGCGCGACAACAAGAAGACCCGGATCGTGCCGCGC
CACATCCAGCTGGCGGTCCGCAACGATGAGGAGCTGAGTCGGCTTCTGGGCACGGTCACC
ATTGCCGCCGGCGGTGTGCTGCCCAACATCCACACGACGCTGCTCCCCAAGAAAGTCGGC
AAGGGCAAGGGCGACATCGGCTCTGCGTCGCAGGAGTTCTAGAGCCTCGCAGATGAAACC
AGCATCATCACAGAAGATTTGAGGACTCTTCTTTTTCTAGTATGGCGATGCTTTAGGTTG
TTAGATTAGTTCTCGGTCAATGCTTTGGTTGGTGTATCGATGATGAATCTGGTTGGAATG
GAATGCTAGCAATCTGGTTCTAGTTATTGCTCCTTGTGATATGCCAAATCAAAGTGAAAA
TATCTTGTTAATCTGGGTATGAATGGTACTGTCCTGTTGTTCGAGAGTATTTTTTGCCAG
TATGTTTATCTTCAGTCACGCCTAACTTTGCCAAGATTCAGAAAGCGTGTGATGCTAGCA
ATCTCAGCAGTTTTAGGATAATCTTCCTGGGTACTAAGACAGCCCCCTCCAGAAATCCTG
TACAATGTTGCAGACAGAACTGCGTCCAAACTATCCGGATGCGGACCGCAACAGTAAGAT
GTTACCCATGTGACCAATCATTTTAGCAATATAGTGAGCACATAACCCTGTTCATCCCAT
GATGCCATTTTCATACTGCAAGTTGTTTCGGCTAGCACATTGAATTCATAATTGCAAGTT
GTTTCGGCTAGCACATTGAATTCATAATTGCAAGGTAGCTATGTACAGTATTTCTAGTAT
GACGATGCTTTAGGTTGCTGGATTAGTTCTTGGTGAATGTTTTGTTTGGTGCTGGTGCAT
CGATGATGAATCTGATTGGAATGGAATACTAGCAATCTGGTTCTCGTTATTACTCCATGT
GATTTGTCAATGTGAAAAGTGTTAATGCCGTAGATCGACTAGGCATAGATAGATCCGGTG
AAACCTTTTACTCACCTAGTCCCGAGCCCGAGGAACTCCCTGCTCCGGCCATCAGTGCCG
GTGTAGTCGTCGGTGGCGTGAGG
