morexGenes - Barley RNA-seq Database

Contig contig_41413
Source Contig contig_41413
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_41413 (7377 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_41413

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_57092	1	2577 bp	AK371039	Available	Available	None
MLOC_57091	1	993 bp	None	Available	Available	None
CDS Structure of MLOC_57092

CDS Structure of MLOC_57091

Contig Sequence (7377 bp)

>contig_41413 7377 assembly3_WGSMorex_rbca.fasta
GCTCGTGGCGGCGGGCCCCAGCCGCCTCGGGCGGTGGCGGCAAGTGCCACGTGCCGCCTG
GTGCACCTGCCGCCACGGAGGGGTGGAGGTCCTTTCCTTTTTTGCGTTCGAGCTGGTCTT
TTCTGGCAATCACGTTCGACAGGGGTCCTTTTGGACAAATATTCGAAAATGACAAGTTTC
ATGAATTTTTGACTTCACTACCATTTTTATTTTTTTGAAATTACTCCGTAAAAAGAATGT
ACTGTCATCTACCTTTTTGTCAACATCGGTGATACCTATTCTGGTAATGGTCGCGCTGCT
TTTATTTCTAGGGCCATTGATATTTGGCTCTTTCACCGCATTAGAAATCACTTTTGTGAT
TTTTTTTTCCCCAAAATCCCCAATGTACGGAGCTCTTACAATTTTGGGGACACATATGGC
ACTCTGCGGCTGCTGCCCCACTCTTCAGCCCCATCGAGGGCTGCGCGCCCCACCCCGACG
GTGTGGTGATGGCGTGCCGCCCCTCTTGCGCTCGCTGGTGTATAGTTCTATCGTGGCGTC
GAACACCACCATTGGATGTCGTCCCGATGCTGACAAGACCCGGATCTGACCAGACGACGA
GCACCTTAACTACCAGGCGCCATATGCTTGGATCTGGTCGTTTCAGCAGTACCAAAAAAA
TCAGTAGTTTTCTCTCACTCACTTTCAGACTCTAAATGCTCATATTCTTTACAACAAGTA
GTATCTACAGGTTTCGCGTATTCTTATGTTTATGTTTACCCATATAAAGTTTGCCTAGTT
AATCAACAGTTTGTAATGTTGAAATTAAATCAGAAGATCCTTTATCATCATTAGATTTGG
CATCAAGTTTTCATTAACATCTAACACAATATTATCTTCAATATTTTATCAAAAAGGGTT
TCCCCGCTTTGTATACAAAGCAACCAACACCGTACATGGATCATTGCTGGGCTGAACAGC
ACATCAAGCCCAAAAAATAAAAAATAAACAAATGCCAACATCGTTAACTCACAAAGAGCG
GAAGATTCGCCACTACTGCGCCTTCCGGAGACAAATCCCCACAGTCCGAGGCTCCGATCC
GCCAGCACGGTTGCGCCACTATCCATGCAGTCTCACTGCGAACACCAACCCGAGTCCAAA
GAGACCGGAGAGCTGCGCCAAACGATGAAGCAGCAACACCGAATCCGAGCGGGAGGAGAT
CCACCGCCACCGCCGACGTGCGGGAGGCCCGCGCCTCCGGCACCGCCGCGGTCACCAACC
GGACATGGCAGCAGGGCATACCAGGCAACCCCTGGCCTAGCCGGGCCCGAATCAGGCCCG
CTAAGCCCTGTCGGACATGCTGCAGTGGGCTGGGAACGGCGCCGTCAGCACCCAACCGCC
CGTCGCTGCTCCCCCGTCTCCCGGAAGCTCCGCCGCAGACCCGCTCCGCCGTTGGCCAGC
CCAGGCCCAGATGGGCCCCACAGGGCCTAGATCTGGGCTGGGCGGCCGCCGCTAGATCTC
GCCGCAGTGTCACCCTGCCGCCAACAACGCCGTCGCCGCCGAGCCGTCCACCCACGCCAC
GTCGGGGAGCCCCGTCGCCACCTGGAACGCCGCCGCCTAGGAGCACCCCCTCTTGCAGCT
CCGCCCCGCGTCGGAGAGCCATCGGGAGGGGAGGGGCCGTGGGCCGCCGCCATCAGCGAA
CCCGGGGCCAGACCGGCCGCGGGTGCTAGCGACGATGGCAGAGAGGGGAGGAAGAGAGCG
GGGCTGGAGGAAGGAGGAGGTTGGCCGCGGCCGGTCGCCCGCCGGGGCGACGCGGTCGCG
GGAGCGGCGCCAATGATATTTTAAACTTTGAGTGTGTGCAGTCCTCCCTCCGGGCAAGAC
GGATGCAGCAACGCTGGACGTTGCTGTTGCAATAGCTATTTTACCCTTTACCGTTGGATG
TAAAGTGTACGGGCTAGATTACCGTTATCATGTATTCCATCCGTCCCAAAATAAGTGACT
CAATTTTATACTAAAGTTAGTATAAAATTAAGTTATTTTTGAATCACTTATTTCATGATG
GAGGGAGTATCACTTTTGTGTGGTTGCATCTTTTCTCAAGTCCCCACCAGTTCTTTGAGA
GGCGGTGCTCTCCTCTGTCATGTCCCCTCCTATTCTCCTGTTGGGCACATGCCCCTGTTC
CAAACTCCCTGAGTTAGGGCTAGACTAAAAGGGGTCTCCTCTCTTCGTGCTGATGACGGC
ATGGCCGCAAGTTCTAGTCGAGAAGAAGGAATGGCCATGAGATCTGCATCGGCATCCTTC
AGGACTTCTCATAAGTGGTTTAAGAGGACTTATGTCCAGTATCATTGAGATACGCATACA
TAGGTGACATGCGATTTGGTTTCACCTTGTTATTCAATACCAAAACAGTCTTTCTAAGTC
TGAGTCGACCGAGTCTTTGTTAAGTCTCAGTCGATGATATATCCGTAAGATCTTACATTA
AGATCCGTGCATTTTTTATTTTTTATTATTTTTTCTGTTTTGTATGTAATGTCATTTGAC
TCTGAGACTTTATTAAATCTCAGTCGACTGAGACCTGAGCATACCCGTACCAAAAATAGG
ACCCTCTGTTCGTGATTATGCCCTGTCCATTAGGATCTAGGTTTCCATAACTTTTTTTTC
CTGCTACTACCTGCATTTCTGTTATTTTCATTTGGTATAGTTGATGGAGCTTCATAGTTT
TATTGAGAAAATGTGCTTGATCTAGCAACCTCCGAGGACTTGTAATTGACATTAGGTTGT
AATTCATGAATTGTCCAGGCATATGCAGATGATTAGTTATTTATTTAGATGTGTCTCTTT
CTATTGAGACTCGAAAGTATAAGGCTGTGGGGTAAAATGTTTAGCTATAGATTCGGACAA
CAAACTGCAGGTAGGAGTGGGCATAAGTGGGACTAACTAAGTCCATCCCACTTAATCATC
TTAGTGAGACTCCATTGGATAACAGTAAAATTAGGTGGGTTGTCCTATTTAACCCGTCGG
AAACCCACTACACCAGTGCAAACATGCTGTTGCTGACCATGCACATACATACTATGCCCG
TCCCAAACCCATCAGCAGGCAACAACTACGAGTCTGGTATGATCTTATTTCCTCTACGAA
GGCAGGCGTCGAGCCTCTCTGCACTGTGGTTGTGCCCGTGGCTGTGCGGCGACAGGGCTC
GCCTCGTCTAGAGCGTGAGGACGCTTTCAAGTACGTCAGTGGCTGCTTTGCCACGGTCCG
GCGCCCTGCCCACGGCTACAACATTCCGACTGGTGCTCTGGCTGAGATGATCCATCGACG
CCGGTTCAGGAGGCGTCGCGTATCATCAGCAGGGAGCCTCACACGGGGGCCCAAATGTCA
ATGCCAGGGAATTGCTCGCCGTCGTCGGCAGTGGCTCAACTTGGCTGTTTACATCGGAGA
GTGAGGTCGGTTTGCGCAGTGTTGTGTCGTGTCTTCATGGAACATGGTGTCGCCAAGGAA
GACGACGACCTTGCCGCCGTCAATGACAGGATCTCAACTTTACCTTGCCCGATGAACACT
TGCGCTACGCCATGAACTCCTCCTTGACCACCTCGAGCGCAGCCACTTGCTGAACTTCAG
CTCCGTCCCATCCGCTCACCCAAGATGGCGAGCTCCCTCCTCGACAAAGGTTGTTATACA
TCTGTTTAGTGGAATCCCACTTATTTAATTTCCAACTAATCTACTTAAGTTTTAATGGAT
TGTTAGTTATCGCCCAGTCCCACCTGCAGCCTGAAGAACCATCATATGGAGGTAGCAATA
ACAGAATATAAGCTTACACTTAATGTTTTAAATAGCGGGCTACGGCAAATAGCGACGAGC
CTCCGCTATAGCGGGCTATAGCGGCGTATTTGTACATGATACCATTTAACGGCACCCTGC
TGAAAAGGCTATAGCCAGGCTATAGCGGGGCTATTTAAAACTATGCTTACACTGCGGGAA
TCTCATCATAGAAGCATGCATCATCTACTCCCTCCGTTTCTAAATATAAGTCTTTTTAAA
AGTTGCACTAGAAGACTACATACAGATGTATATAGACACATTTTAAAGTATAGTTTTATT
CATTTGCTTTGTATGTAGTCTATTAATAAAAACTCTAAATGACTTATATTTAGGAACTGA
GGGAGTAGCATTAATGCATGCGGAGCAAATACCTTATGTGGTGAGAATAGGGGGCATGAA
TTTGGATTTGGTTCCGAGCACCGGAGCCTCGGCTGTGTCGGGGAAGCACTTGGACCCAGG
CAGTTCCGTGACGGTGCCGTCCTTGGCCACCGCAACTGGGTAGGTGAGAAGGTGTCCAGG
GAGGTCGTCCTTCAGCTCATCGCTCGCATAGAGATCCCAGTACTTGTCAGCCATCTTGTT
CACCCTCTGGACGCACCCCAGGTTCCCCGGGTTGAGGAAATCGTCGTGCAGCATGCCCAG
GTGCTCGTACCACAACGACATCCGAAAGCCATGGACCTGCCCTCTGGCAACCTGGCCTTT
GTTGGCGTTGAGGTGGTGAGGCTGGAATGCGCCCATGGCGATCTCCGAGTCCCTGCCCCC
GTCCATCGACCGCTGGTTGATGTTGGCAGAGCCGACCATGATGTACTCGTCGTCCACTGG
AAATCAAACAGAATACAGTAACATGTTAGGCAATTTTTTACTTGGAAGTGCCTATATATA
GATGTGCAAGAATTTTCTGCAACATGCATGGTGGAGCTAGTGGGCATATATATATATATA
TATATATATATATATATACCTAGGCTACGTACCTATCATCATCTTAGAGTGCACATAGAT
CATGAACCGCCGAGCGTTCTGCGCCATTTCATAGGGAGACCCAGCCCAGGCAATGGACGA
TCAGCGGGTTCATACTCTCCGCTCCTCTTCACCTCCCTGTTCCCTAAGCAAAAGAAGGCG
AGGTAATCCTTGGGGTTTGCATCAATCGTCCCCTTGGCCTCCAGCCCGATGGCGATGTCA
TAGTACATCATGTCCATGGTCCTTCTCTGCCAATCTAGTATTGCCTGCATAGATCCATGT
TCAGGAACACCTTCCGGCCACATGGGCACCACGACATAGACCACGAAGCGTTCACCGGCC
TCAATCTTGCTCACGATCTTGAGCGAAAGCTCTCTGGGAATCAGATGCAGCGCCTCGATT
TCTTCCGGCCTTATGCCGTCGGCTTTCCACGCGAATGAACTGCCTAGGAAGTACTGGTTC
TCGATGTAGATGAAGTGCTTCGCGCGGCGTATCGCGTGGATGTAGGCGTCCTGGATGCTC
CTGTCAATGGTGTTGTTCTTGCCGCTGACGATGCCTGATCGAGCGGCTTCCTCGGGTGCG
CTAGGAAAGCCGAAGCTCGCACCGCCGTCGATGGACCGGAACACCTGCACCTTCCACGCC
TCCTGGTCGTCGGGGAACGTCACGGCCGATGGCGGCATGATCAAGTTCTCCAACGCTACC
AGATCGACGAGGAGATCATGGTCACCGCGTTGCTTCCTCCATCGCTGCTCGAAGTTGTAG
AGAATGTCCCACGCGGCCGGACCTTCGATCTTGGCATGGATGTCGTGCCATGGCTGCCTC
GGCCCGCCCTTGTCGACGGACGCGTCGGCGATGCTGCCTTGGTGGAAGTCCTTGTGGTGC
GCCGTGTCCAGCGTCCTGAACAGGGAGTGGAACTGCGTGTCGTAGCGCCCGTCGCAGAGG
TCGAGGCCGCTGACGAAGCTGACTATGCGGCGGCGGCTGGAGCTGCCCCTCACCGGCATG
TCGTGGTCGACCGCGATGATCTTCTGGTGGTGGCTGATCGTGTAGGCGGTCTCCAAGCCC
ATGACGGCGCTTCTGCCGGCGTCGGGGTTCCGCGGGCAGAGGACGCACTGCACGTCGCTG
CCGCGGAAGTAGTTCGCCGTCTCGGCGTCGTGCGTGTCCATGTACCCCCACGTCATGCCG
AGGGACTCGACGGAGGTGCGGTCGTCCCAGACCAGCATGAGCACGCGCACGCCCTCGCTG
GCCTTGCGCTTGAGGAGCTCGCCGAGGGTGGCGTCGCCGCCGGGGCGAGGCCGGTCGCCG
TCCCGTATCAGCGTGATCTCGGTGTACACCGACCAGACGGTGATGTACACCAGGTGGCGC
GCGTCGGTGATGGCGTCGAACACGTCCTCCCAGCACCGTCCCTGCTTGTAGCTCCGGCCG
CCGGAGAGCGGGATCCCGGGCGCGAACGCGTCCGGGGTGTGCGCGTCCTGGTACAGGGTC
ACCCTGCACCCCGGCCGCCGGGAGAAAAACGTGTAGGGCACCCCGGGATTCCCCGCGCTG
CCGACGCCGGCGCCCCACTCACGACGGCTTGAGGTGACGCCGCAGAACCTGAGCCGCACC
TGAATCGTGGGCCCGTGGGCGAGCTTCTGCTTGGTCGCGTCGAGGATGTCATTACCGTCG
GCGTCGAGCAGCTCCCGGACAGGGAGATAAGCGCGGCCGATGAGGGTGGCGCCGATGGGC
TGCGCGGCCTTGACGGTGAAGACGACGTCGGCGGCGAAGTGCGCGCAGTAGATGTGGAAG
TCCTCGTACCAGCGCGGGTTCACCGGGTCGCCGGCGAGGACCCGCGTGCGGCCCACGCGC
GCCCTGCCGATGTCGATGGTCGCGTACAGCCGCGTCGAACCCTTGCCCCGCCCGATGGTC
TCCTCGAACCCTTCCACCAACTGCAATCAGACGACAAGGTTCTTATCTACAAATTTCACG
AAACATCAGATCTCCTTTCCATCTTTTCTTTCGTTCCTCTCAGGTCCACCAATGGGGCCA
TGCGCGTGCTGAAAGCGCGCTCACCCCCTGTCCACGCCATCGGCCATAGTTCGCCGGCAA
GGCCGCCCTTCGTTGTTGTCCTTCCTTCCTCCTCTTTTCTTCTCCACCCTTTCCTAACCA
GACCGAGCCAGCCGTCCACCGCGACACACTCACACGCCTAGTATTAGGATTACTAGTCTA
GTCATGTTGCAGAAGTTAATTATGTTGTTTCTTTAGGATTAAGAAAAAGAGCCAAACCGA
GTCCTAGTAGTATTAGGATTCCTAGTCGTAGTCTATTTCTATAGTCCCTTGTGGACGTGT
ATAAAAGACACCCTAAAGGTGTTGATTATAACACCAGAAAAACGAAAAGCAATACAAAGC
AAAGGCACGACACGAGCCTTTAGCTATACGCACCACCAAAATCAGTTTCCGTTCCTCTCG
TACTCCTAGTTACGCGGCCGTCGTCAAGAGAGTTAAGGGTTCCGCCGAGTTTAATCCGAT
ACACAGCAAGCTAGCTCAGGTTGCTTATACGTACGCGAGTGCTATTGCTAATCCATCCAG
CAGCTTGTCTGCTTGGTTGCTATATAGCTAGCTTGCACGTACGTGTAAGGGAGCTTT