| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_41379
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_57045 |
1 |
485 bp |
AK374727 |
Not available |
Available |
None |
CDS Structure of MLOC_57045
Contig Sequence (5566 bp)
>contig_41379 5566 assembly3_WGSMorex_rbca.fasta
ATATATTAAAAAATCTAAATATATATGTATATATAAATAAACAGGTCGTGTCATACCGAC
CTGCGTGCCCAGCCTCCAGACCCAGACACGGTCCGAGGCGTGCTTCGGACCAGGCCCAAA
CACGATTGCCCGTGTCATGGGAGGCACGCGGGCTGTCAGACCGGCCCTGTTTACACGGCC
CGTTTGGCCAGATCCGCTTCTCGTTCCCATCTCTCTCCTCCTCCCACTCTTCCTCTCAGA
TCCCTCAATGGCAATAGCGTAGATGCTAATAACGTGTGCTCCTTCTCCCGCGGATGGCAG
GGACGACAGTCGCTGGTATGCGCTTCTTCTGTGACAACGGCGGGCGCGTGTCCTTCACGG
TCTCTGCTGCATTGGCCCCGCACTCGAACACCAACAGAAGTCATCCCAGCAGCGCGCCAA
ACTTGAGCAGAGGAGAGCAGCACATGATAGCAGCCACCGGACAATGACCATAGACCCAGA
GTCTGGCACTCTCGGAGCAAATATATGGCAACGTTCTTCTTGTTTGAGGCCAAGCTAGTC
TGCTAGTGCACGAGCTCCGGGTGCTGTTGCAAATGAAAAGCGCTGGTTATTTTGCTCACT
ATTGTGTTGTTGTGCATTAGCAGAGAACACAACAAGGACGAGAGTGTCACCATGTACGAG
TTTAGCTTGTACCATGTGAGTATAGCAAGCTGCTCTTTGCCTCTTTCTATGTGCGCGGCG
GCGAGAGCAGAAACAGCAGCAGTATGCGGCAGCGAGCAACAACAGCACATGGTGCTGACC
TCGCTGCCTTCATCGGGCTAGACTCGTCGCGCACCTCACGAAGTTCAGGGATGACCAATG
CGCCCAGGCCACCGCCGTCGGTACCCCTGTCACCGCCATTGTCAATGTCGTCCGCGGGTT
GGACGGGCTGGACGAAGAGATTGAGATGAGAGGCACCTAGAGTGCGTCGCCAAGCAGCTG
CTCCCGCCCAAGAGAGTAGGTCCTTCTCCGGGAGCAGATCGAACACCTGTCATGCCTCGC
CACACTTGGCATTGAGGAAGAGACTGGGGAAGGAGATGCATATGACAGATGGGCCCATGT
ACTACGTGACAGTAGAAATCAATCCGGGCTGGGATTAGGCCTTTCTTATCTTATTACACC
AAACAGGGCCGAGATTGATCGGGATCTACAGGGTACCAACTTCAAGGATTTAGAGACGAG
GGTTTGTTTGCGCCGACCTCTAATCTCACGGCTTATTTTAAACTTCACTCCTAATGCAGT
AACCAGACGCGTCTATGGCTGACGGATTGACTTGACGCGCAGGCAGGAATCGACAGAGAG
GCGTGGTCTTCTGGCATGACCCGGGACGTCGCCGCTGCCCAGCGCCGCCGGCCCGGCACC
TCCTCGCGCTGCCTCTGAGGCCGCGACACCCCTGACACCTCCAGGTCAGACTCGACACGG
ACCGGACACCGGCGGCACGCGTGCACCAGCTGCCCTGACGCGTCAACCCTTCAGACCGCA
GAAGCCCGCAAAGGCGGCGGGTCGGAGTTCAGAGCAGCAACGTAGGACAGGGGACAGAGT
GGACGGGATGCATTTCATTTCGTTCATCGGGCACGTCTTTTCCAATGCTGCTTCCCTACC
GTCCAAAATTCGACATGCGATTATGGGCACACGTAGGCCACAGAGTTTTTTTTAAGGCAT
CTCCAACATCGTGTATCAAACCGTCCGTGAAGTACATGTCCGCGGATCGTGTCTCAATTT
ACCGGAAGCAAACCTGACAGCTACCACGTTAGATCGTGACACCCCGGCTCACATATGGCG
CCCGTGCATTCGGCGACTTCCCCGCTGTTTTCGTGCGAAAGCCTGCCCTTTCCCATTGTC
TCCGCTCCGACCGCCGTGAGCACGCACCCGAGTTTTCATCCGTTTCGTAGACCACCGTCG
TGATGAAACCAAAGGAGGTGGTGATGGAGATGTACGTAGTCCCGTCAGGTCCGAAGAAGA
GGACCCGCCGGTAGTGGCCGCACGTAAGCCCAACACGGCAAACACTTAGGGTATGTACGA
TGCATAATCTCATGATGATGACTCATATGTCATGTAGAATTAGATGTCAGCAAAAGTAAG
TTCGGATGAGGAAGCGGGATACATCGCAGAAGGCGATTGTTTGAATAGAAAAAGTGTGAT
CCGATGTAAAAACTGAAAAGGTTATAGTGAAAAGTAAAGACGTACGTGTATTAGAGTCTT
TATTTCTTATTCTTTGATGAAGCCTACTATTGATAGCTTGCATAAGAAAGAAAGAAAAAA
ATCAATAAAGATGATTCAGATAACTTTTTATCCTGAAGCATCTGTATCCATATGCCATCA
TTGTACATATGGATAGGTCTAGGGACGGTTTGATAGTTGTGTTCGGTTGACGGCTTAACG
ATTGTGTTTCGTTGTACTTTAGATTTCAACTTTCTAGTAAAAAAACTAGAATTTGAACAA
AGGGGCGGACTAAGAAGAAGCTTCTTCCTAATCTATAACTTTTGCTAGTTTAATTTTCGC
AGTCGGGTATCCCAAGTTTTCCAGCTTCTAAACCGACCAAATATGTATGTCCCCTAGCAG
TTTTGTTCTATTTATCCATCATGCCACTCCGTAGTGAAAATGTTTCGTTGTTGTTTCCCT
CGTTAACCAGCCCGACCGAGAGCATCCCCTTCCCCCGCTCGAGTCATGCGAGCTAGGGTT
CTTGTCCAGCCGCCGCCGCCGTCGAGTAGGCCATCCGTCGCCACGAAGCCGACCGGTCGT
CCGCCAGCGAGCAGTCCATCCGTCGTGTGTCCCGTCAGTCGTCCGTCGTCAAGCCTCCCA
TCTCCGCCCTAGCAGGCCCTTCGCCGCGACGCCCCACATCTGCAGCGGGCCACGAGCAGG
CCGTCCGCCGGCGACGACGAGCAGGTTGTCCGACGTGAGCACATGCCTTCACCAGCAAGG
TAATCCCTTTCGTCCTCCCTTCTCCCCTTCGTGCGTCCGCGAGAGCAGGCTGTAAACATC
TTCAGCCACGACTTATAAATTCGGACCCTCAAACGTCCGCGGCCGCGCAGTGAGTGACCG
GGAGTGTCTCTTGTTTATCCGTCCGTGCAACCACATTTTTTATTTTCTTCCTCATATGTC
CGGTCACTTGCACGCGATCGGTGAAGAGGAAAAGAAAGGAAGAAAAGAATGAATAAAAAG
AAAAAAAATGGTTCGGAATGGGGTCACATCCTATGTGACGGATTGATGAGACGCGTCCGC
GAGCTCTCGTATCCTCCGCATATTTGAGATGGATACGAGAGTTTGCACACAACCTAGACA
TCTTTACGAACGTATGAGAAACCATTTAAGGGATAGGGCTATAGATGGTCGCCCGGAGTC
CACCATCACAAAAGCGAAGATGTTTTGGCGGCCTGTCACACAAATTTTAGGTTCGGCCAT
ACGTATACAACTTTATGATATCCTACCCTTTCTGATTGTGACTGCATATGTTTGAACAAT
GTACAAATTGGTATTAATCTACTCCCTCCGTTCCTAAATATAAGTCTTTTAAAACATTTC
ACTAAGTGACTACATACGGAGCAAAATGAGTTAATCTACACTTTATATATGTCTATATAC
ATCCGTATGTAGTTTCCTAGTAGAACCTCTAAAAAGACTTACATTTAGGAACGGAGGTAG
TATATATGCATGTCAAATGGTGGACGTCAGATCTAGGACCTATATTTGATGCATATAAGA
GCATTTACATGCGGATTTGACAAATCTGATCTCTCGAACGTTTGCGAACGCGTCCATGCG
CGTTCGTGGACGTCTTAAATAATACATTATATAACTGGATACCTCAAATTAAAAACCATA
AATACATATTATTATATGCAACGCAAATCTAATACTAAGCGAAGCTTGTCCGGCTCCGTC
GTGTCCATGTCCGGCGGCTGGTTGCATTCCTCGTAGTGTCTGTCCGGTCGCCGACGAGGT
AGAATAGGACGTGGGACACTAACCGACTCACGGGAGCAGAGCTCCGGGGTCTCTCATGTC
CTACTCTTTCTCGTCGAAGCCCGTAACTCATATGGTGTCGACGGGCGTGAGGTCAATGAC
GGATCCTTCCTGAAAAGAGCCGACGTCCACCACGACGTGATTACGGCGTCCGCACTGCTG
CACCATACGGGATGCCAGGAAGTGTGACTCCGTCTCTCCAATGTCCACCGCCGCATCCCA
TGCCCACTGCCTCGCACGATGGGCACTCCGCGCCATGTTAGCGTCCGCGAACGCCCATGG
TGCATCCTCGACGCGCCAACTATGTGGTTGCGTGTCCATCACGACGTTCGGACGCCAGAC
GGATCACACCGCCTCCGGTGAGGCAGCGACGCCGGATCCAAACATCAGTTGCACCGACGC
AATGGATTCCCGACGATGCGAGTCCGAGCATTGCCTTCGAGCGGCCGCCTCCCAAGAGCA
GCTAAGCGCAAACCGGACAACCATCTCCTCCTCACGGTGGCGTGGGATGAGATCGTGGTC
AACGTATTTTAAGGTGAAGGATTCGGATCTGCTGCCCGTCATGTCGGAAAAGGCAGGAGA
TTGCAGGAGGTGAGCTTGGATGACGGATGTGAGTGGAGGAAAATGCCTAGGATTTTGATT
CGACAAACTGATGGAGGCGAATATATGTAGGATCGATGCAGACCAATGCCAAACCGACGT
GACGGGCATGCTCGGGCACTTTGTATTTATGCTGGAAATGAGGGGTGTCATTCAGTCTTA
GACGTTTGTGGCGTCCGGCTAGGTCAAAATTTCAGTGACCAGACGATCTGTCCAAATGTT
TGAGGGGTTTAGGACAACCAGCTGTAGATGCTCTAAAATTGGATAACAATTCTGTCGGCG
CTGTCTGTTGTCTGCCGATGTTTACGGTGTCCGTTTCGATGGACTTTTTTAGAGACGTTT
TGATTGACTTGGAGATGCACTAACCTGGAGCGCTCTCTAGAATGATAGCCGTCAGTAGAA
TTTCGGACAAAACGTTGAGATTTTGTTTTAGATGAAACGCACAGATAGTTGGGACTACCA
CCACAATACGCAGTAACACCAGTTCTACCTGTAAATCTTGATGACCCTACGGTAGCAACA
GTTTGCACTTTTTGTGCACTCCTCGGAGAGGGGGAAAATTTCAGTATCCATATGTAACAG
CAGCTAAAGGAGACCCCCAAGACGCGGCCCATCTTCGGGCGCCGAGAGGGAGCGTGGCAG
CTGCTGCTGGCGTAGCCTCAGTAGTAAATGGAGAGGGTGCGGTGATGAGACAGCGCCATG
TTCTGAACGCCTACCGACCAGAGCCAGAGGTCAATGTCAATGCTCAGAAGCTGCCAGAGA
AAACACAACAGCAAGAGCCAAGTCAGCCCGAGGTAAATCAAATGCCACACATTGACTGCT
TTGCTTACTACGACCTCCCTTCCTAAATACTCCCTCCGTTCCTAANNNNNNNNNNTTTAA
GCGATTTTACTAAGGGTCTACATACGGAGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTATATACATCCATATGTAGTCCACTAGTAAAATCTCTACAAAGA
