Map Locations of contig_41361 (9725 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41361

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57033 3 1344 bp MLOC_57033.1 Available Available LOC_Os05g44390.1, FRAME:+1, EVALUE:2e-84, 13105.m04695 protein peptidyl-tRNA hydrolase, putative, expressed
MLOC_57032 1 467 bp None Available Available None





CDS Structure of MLOC_57033






CDS Structure of MLOC_57032






Contig Sequence (9725 bp)

>contig_41361 9725 assembly3_WGSMorex_rbca.fasta
TGGGAGGCGGCGGGGGGGGAGGGGGGGCGGCGGCGGCGGGGGGGCGGGGGACGGGGCGGC
GGCCGCGGCCGAGGCGAATCGTGACCCGCCGCGGTGGGACGGGATGGGGGAGGCGAGGTC
GCGGAAGAATGGCGACTGGCGCGCCGCGCGGCCGCCCCGGCGCGAGGCGGCGGGGGAGCG
GGAGGAGGAGGGGGAGGCGGCCATGTGGGCGGGCGCGGGGGCTGGGAGGGTTTGGACTCG
GCGGCCGGGCTGGGTGTCCGTTGCCGAGCGGATGGATCGGGTGGATGCCTGCCCCGTCTT
GGTCGGTCGGTATGCTTTTATTGGGCCGCCGCTCTCCGTCCCGTTGCTTGCTTGCTTGCG
GGGCTGGCAACGCGCGAGGTCCGGCCCGAATCCATTCGGGTTAATTTCAAGATCCTGGGA
GAATACTTCATCTTCACGATCCCCTAAAAAAAAACTTCATCTTCACGAAATATTTTTAAC
TTCATGTTCACGACTTCTCTGAAAACAGAAAAAAAGAAGTACTTCATGTTCACGACGAAT
GAAAAGATTCTTTTTTTTTTCTTCGAGAAAACGCAAAAGCTTTGCGTTCCATTTCATTGA
AAAGATGGGGTACAATCCTCCCAGGAGGCTGAAGATTCAAAGTTTACACAGTTGGAACAG
AGATTGCAGCGCAAAACAGTCCAGGAATCCTTTCGTCGTGCGGCAAGCAAAAACAAACAA
GGTAATCTAGCGGGCTGTAACTGGAGGTGCCAGGAGTGTCTGAGAAGACAGGGCTACCAT
GCACACCATGGACGAGTATTAAGTATTAACACATGTTTGAGGTTTCCTCTTGGGCGCGCA
CACGGTGCAAGCAATCCATTACTTTTACTTGGGGAACGGGGATGCACGATAGCCTACCTT
GAGATCACAAATAGTTGCTCATCAGTGTTGCCAAAAGGAAAAGGAAAGGGAAAGCTGTGG
TGCACCGGCATCAATTTGGTAGTATAACAAAAAAGGGGTTGCGGATGGTGGCATTTTAAA
AATCAAGCACTACAACAGTCTACAGGGATGGGATGGACCAGAAGAATCACTTCCGGGTTA
ACACATGAGGATTGAGGAAGGGGATCTAGCCTTCAACCGCGAGCACGCAAACATGGTCTT
CGAAAGGGGTGGACGTGTCCGGCGTGCTACCTGGTAACACTTCGAGCTACGCCAAATGTT
CTGCAGTCAGATGAAAGGAAAATCCCAAGGTTAGCAGAGTTGCAACACCAACTCTGGTTA
CCACCAGTTTCCTAAGGATTCTAAAGAATAGCGAATATTTATGGACCCTTTGAATTCATA
AGATAGAAAGGCGGGTATGTTTAGAAGGAAAAGCATCATGAAGAACTGGGGAATGAGACT
GACCATGTCCGAGATGCAGCTTACAGTAAGCGCAATTTCCCAGTAACCGAATCTATGTCA
GCTTTCCTCCCTGCACCACAATAATACCATGCTATATTATGCTCTGCCATTGTGCCAAAT
AAGTAGTAGAAAATTATTAGCAGGCTTCACGGGATAGCAGTTTGAGAACTGCTATCACTC
TATAAGGAACCTGAGGACCATACTCTTGTAACAGAATTAGCACGAGGGAAATTTTATACT
TCGCGAAAAAAACTGAGTAGCTACGAGAATAAAACAGCATAGTTCTGAATGAGAAACTAA
CCTGGGCCTACTGCAAGAACTGTCTTAGACCCAGCCACTACCTACAAAAAAAATGAGAAT
TGGTAATGATCCCGTTTCAAAATATAATAATTAAAAAACCGTTTTAAAAAAATGGTAATG
ATCACGATAAATAGGATCACAATCATTTGATATACATTTTTTTTTGCATACACAAGAGAT
ATGCTACAACGTAAGTAAAAAAAGATTCAGGGTAACTGCCACTATTATTTTTAATTTTTC
TACGCAATGGCAGCCACTATTTATTAGTTTTCATTGAAAGAGATTAGTCTAATATATGGA
TTTGAACCGTTGGCTAAACATAGCCACCAATATGAACACCCTAAAGGATAAGCCTTGCTA
AAAAATTGATCAAGAGAGTACGTTATGTCCGTATAGAATTTACCCTAATCACAACTAGTC
AAGTGTTTTTCAGATTCAGACATTCAGTCACTTTGACACGCTGAATGGTCAGAAGAAGGT
TTCAGACATTCAGTCACTTTGACACGCTGAATGGTCAGAAGGAGGTTTCACAATTGGTCC
CTTGCTGATAGCGAATGCCCTAATAGGGCTCCTTACATAGCAAAAAATAGATGACCAACT
TGTCCTACCAAAGAAACCCCAGCACAGACGAAATTATATTCGGTATCAGCAATAGGCAGA
CTCGTAAAAGCATAAAACAAACCTGTGTGCGACCTGCATCTGCAACAATAAAAGTTGGGA
TACCTCGGTATTCTGCAGTTTCCTTTATCCTGTTCCTGATAATACACAAGCGAGAAAGAA
AATAAGTGCTACATCATTAATCCAGAAAAAGTGTACAAAGAAATATAGTCCTGGGAAAGA
TATGGCATACATTTCCTGTTGATTTTTGCAGGTCAAAACAATCTTAGCTTGTCCAAACTG
CTCCCATTGTCTCAAAAGAACCCGGTTGCTGCAAAGGGATATGTCAGATGAATCATGAAT
GATTCTGGAAAAGAAAATTTAACTGTGCAAAGCGAAGCATAAAAGGTAGGCAAACAGCTC
CTTAACACTGGCACCTCTAATCTTGCCAGAGCTTTAGGAGTCTGGTACAATTTAAAATTT
CATGGACTTGATGATAGAGGTTTATTTTTAATGCAGGTTGCACACAGCGCAGTCCGGTAC
AATAAGAAAGACATAGTCCTGATAAAAAAGAGCACTAATTAAAAGACAGCCTATTGTGAT
TAATCAATCACTTCTCTTTTCATTCCACTTAGACATCCTTTACTTAATAAAAACTTTAAC
TTGTCTCTACTGCATCACTTTTTCTTAAAAAAAGGCTTGCTTTCACTGAAAATATAACCA
AGAACAAAAGTGAAGAGTTTTTTTTTTAAGATTATGCTCTAGGGACTCGTCTGATGGATG
ATAAAATACTTAGGGTAGCATTATAACTCGAAGCCACTGGTGCAACATACTTCGGTTTGC
GAGCCTTTTGGTGCTAAATCACGTGTGACACTGACTCCCGTGTAGAAATAATGTCAACAA
ACTCGCATAGTGCTAAAACAATGAACAAATTTCGACTTCATTCAATGTGTACCAGCATTT
CTAACAATGTCAAACCAACCCTACTTGTCTCTAGGCAGGCTACAAGTCTGGGAAATATCT
ACATCCTTTAATAATTAGAACTACCTAAAGAAGCAAGATGGCAAAATGCATTAGCACCTT
GCCAACAGATCCGCATACAAGCCAGTTGCCGCATCTGCAAAGCAAAAAAAAAAAAAAGAA
TGAATTAAAAGCATAACACAGCTATCTACAGAATTCTTTATCTTACTGAGTAGTTAGTAC
ACAGATGGCTTCAACTAGAGTTGTTGTGGACATGTGGCTAGATTTGGTTGTTGCATAATG
GGCAATCAATCAGTCGCATTTGAACAAACTACGACAGTGTTCAGGCTGGGATAGATCAAA
CAGAACGAGATGTACCAAGAAAAAATTGCCATGCTAAGAGTCCAAGAGATGGAACTTACG
GGCACATTGAGACGCTATTTTCCCAGCCCCCATCTTAAGATCCTGACGCACGACTAAAAC
CTGCAAAGCCGTGGTGTCGAAACTCAGTACAAGTTCAAATACAAAATCGTGGTATCAAAA
CAGAAAACCAAGAGTATAAGTAAACACAGCTTAAGCGGTCAGTATTCTTTACTCCTATAG
AGATGTCAAACGGTGGCGACGGCCCGTTCACATCCTCATCAATCATCGTCATCCTTTCAT
GTGGGACCATCTCAAAAGTTTGCCAAAACTTATATGCCCATGTGAAAACCCTGATCTGTC
CTGATCATTCATCGACCCCGACTTCACTAATTAAAATCTGCAAGGTGCTGCTCCCCCACA
AACAAGTTCTGCCTGTGGGGAAGCCGCCTGAGAGCTGAGACGAAGCCAAGTGTGACATGA
GGCGTGACAGCTATGTGTTACGGCCCCTGATGCATCAACAATAGCGTCCACGGAACAAGA
GTCTGACAAGGAGATGTCAGTTCCTGGAGATGGGGTCCAGTTAATTGAAGAAGGTTCAGA
GAAGGAAACTGTCAAGCCCAGCCCAGCGCGGCTCCGACGCACCACCCGTGTGGTTCGGCC
CAACCCCAAGGTCACCGGCCCGAACTGGACGCACTGACCATAAAGGTGAAGGTACAGGCA
CAGGTAGGGTTGTGGTTGGACCAGAACCTGAAGAAAGAATCCCCTTCTCATCTCACCTGC
TTCTCTCACCTACTACTCTGAATTCCTCTTTCTTCCTCATTTCTCCTTGTATCCAGACAT
GTGTTCCCTGTGAAAACTCTGATCCATAGCAACCTGTGTGCCATCTTGAGTACAAAGGGA
TGAGATCTGTGTGTGCAATTTGGGTTCCTAACACTTGGTAATCAGAGCAGTTAGTTCTTG
ATGGTGGCGAGTGGTGACGGCGAAAAGGGGTCGGTGGAGGGCATGCTGCAGCGCCTCCTC
AAGCAGATGGAGCAGCGGGACAAGCGATCGGCCGAGAGGGACAATAAGGTCGACGGCCTC
ATGATGGAGACCAAGGCCAATAACATCAGGATCCAGGAGTGCCTCGGCTCCTGGAGGCCA
CGTGTCAACAAGCAAGTAGCCGACTGTCTGTTCTGGTCAGCAATCTGAAGCTACAAGTAC
AGCAGCTCACCGTCAAGACAACCGGTGGTCCTCCAGCAGCGTCCGTGGTCGTCAGGCCTT
CCGCGGCGCACGGCATCGTCAACCTCATTCAGACGGCGCCACCCCTGCTTCCAGATCCTC
GGGGTTCGACCAACGGGGATACGGAGTATGGGAAGGACGGCCAAAATGGGCACCGTGAGG
TAACACCACTCCGGGGGTTCAGTACTCTTTTTGATGAGCCAAAGGGGTTACCACCAATCA
GGGATCAAGATCATTCTATTCCTCTTCTGCCAGGGGCTCAACCAGTGCAATCGAGACCAT
ATAGCTACAACCCTCACCAAAAGGATGAAATCGAAAGGCAGGTTACGGAAATGTTGCAGA
ATGGCATTATCAAACCTAGCTCAAGTCCTTTTACATCCCCTGCACTACTGGTTGGCAAAA
AGGATCTCTCCTGGCGCTTGGTAGTGGATTTTAGAGCCGTCAATGCTATAACAGTCAAGA
ATAAGTACCCGCTACCCCGTTATCGATGAGTTGTTGGATGAGTTCGCAGGACCTTCCTAT
TTCTCCAGTTTGGACCTACGCTCCGGGTATCACCAAATTCGCGTGCGTCCTGAAGATGAA
CCCAAAACAGCCTTCCAGACCCATCATGGCCATTTCGAGTACAAGGTCATGCCTTATGGC
ATCACAGGTGGCCCAGCCACCTTTCAGAGTGTGATGAATACTGTACTACAACCTCTACTG
AGAAAGGGAGTGATAGTATTTATCGATGATATACTCGTATATAGTGCTTCATACCCAGAG
CATCTAAAGTTGCTGCGACAAGTGTTTGAATTACTTCAAACTAATCAGCTAAAGGTGAAA
TTAGCTAAGTGCAAACTTGGGCAGAGAAGGGAAGCCTTCCTTGGGCATGTCATTAGTGCA
GAAGGGGTATCCACGGATAAAAGCAAGGTGGAATCAGTTAAAAACTGGCCCAGGCCTGTC
AATGTAAAGGAAGTTCGGAGTTTCCTTGGATTAGTGGGCTATTATCGCATTCATAAGGCA
TTTTGGTGTGATCAGCCGGTCTCACTGACAAATCTTCTAAGGAAGGGGGTGGTATACAGT
TGGTCTTCTGACACCAAAGCTTCATTCCAAGCCCTCAAGCAGGCTCTTATTTCAGCACCC
ATCTTAGCATTACCGGATTTCACTGTGCCATTCGAGCTTGAGACTGATGCTAGTCAAATG
GGAGTAGGAGCTGTTTTGATGCAGAAGGGACACCCAATAGCTTTTTTCAGCAAGGCTCTC
AGACCAAGAAGGGGATACTCAACTTACGAGAAGGAATGCACGGCCATATTATTGGCAGTG
GATAAATGGTGCTCTTATCTTGAACACTCCGAGTTTGTCATACGAAACGATCAGCAGAGT
CTCACCCATCTTGATGACAACAGGCTAACAACACCCTGGCAACACAAGGCCTTGACCAAG
CTTATGGGGCTCCAGTACAAATTGGTGTATAAACAGGGTCTCACCAATCGAGCAGCTGAT
GCCTTATCATGATGAGCTCCAGATGGTTCTACTGAACTGATAATAATCTCAGAATGCAAA
CCTGAGTGGTTGCAGGAATTGGCGGACAACTACCAGCAACATAAATGAGCGCAATTGCTT
CTTGCTGAATTAGCCGTAACATCAAATGCTGGACCATTTCTCTTCACCAAGGGGTCATTT
GGTACAAGAATCAAATCTGGCTAGAACCGAGTGTTTCATTGCAACAACAAATTATGAAGG
CCTTGCACGATAGTGCCGTCGGAGGACATTCTGGGATCAAAGTCACCTACAGGCGCATAA
GAGAGCTATTTGCATGGTCTAAAATGAAGACCGGCATCAAAACGTTTGTGGCTAGTTGTG
CAGTTTGTCAACAAGTGAAGCCCGAGCGAGTGAAGTATCCAGGCCTACTTTTCCCCCTTC
CTATTCCAGCGGGCGCATGGGAGATAGTCACAATGGATTTTATCGAGGATCTTCCAAAAT
CTGCTGGTTTCAATTGTCTATTTGTGGTGGTGGACAGATGGTCCTGTTATGCTCACTTTA
TCCCTCTGTCACACCCCTTTTCTGCTTACAGTGTGGCTCTAGCATACATGAATCAGATGC
ACAAGCTACATGGAATGCCCAGGTCAATTGTCTCGGACAGAGATCCCATATTCACAAGCC
AATTCTGGCGAGAACTCCTGTGGATGGTTGATACACGGATGCGAATGAGTATGCCCCAGC
ACCCTCAGACTGACGGCACCACTGAGCGTGTAAATCAGGGCCTTGAGACTTACCTCTGTT
GTTTTTTCCATAGTTGCCCTAAGAAGTGGATTCCCTTGGCAGAGTTTTGGTACAACACCT
GTCCACATGAAGCTCTCGGGGTTTCACCATTTGTGGCGCTGTATGGACACGAGCCACGAC
AACTCGGCATTGACCGAGTGGAGTCTCGCGCCGTGCCAGATGTTGCTGAATGGATGAAGA
AACACGAGACCATGCGTCAACTGCTCCAATAACACCTTGTCCGGGCTCAACACCGCATGA
AGTTGCAGGCTGACAGGCACCACACGGAACACCAATTGGCAGCTGGAGAATGGGTATATC
TCAAGCTACAACCCTACATTCAAACCCCCATTGCAACAAGAGCCAACCAGAAACTATCCT
TCCGGTATTTTGGCCCTTGCCAGATTCAGAGCAAGGTAGGAGAGGTGGCATATGAACTGA
TATGGCCGCCCAAGGCGAAGGTGCATCCTGTCGTGCACGTCTCCTAGCTCAAGAAAGCGG
TGAAACGGCCAGAGTTGGTCTCTACATCTCTGCCTACTAAGACACATGAAGATTAAATGC
CTGAACTAATTTTACAAAGACGTCATTACAAGGTGGGTTCCTCTCTGGTGCCACAAGTTC
TAGTTCAGTGGTCAGGCATGGACCCTTCTCTGTCCACCTGGGAGAATGAACAGGCGCTAC
GACAACAATTTCCATCAGCTACGGTTTGGGGGCAAGCCGCTTTAAAAGAAGAATGTGTTA
CAGCCCCTAATGCATCAACGACAACATCCACTGAACAAGAGGCTGACAAGGAGGTATCAG
TTCCTGGAGATGGGGTTCAGTTAACTGAAGAAGGTTCAGAGAAGGAAACTGTCAAGCCCA
GCCCAGCGCGGCCCCGACGCACCACCCGCATGGTTCGGCCCAACCCCAAGGTCACCGGCA
CGAACTGGATGTGCTGAGCATAAAGGCGAAGGTACAGGCACAGGTAGGGTTGTGATTGGA
CCAGAACCTGAAGAAAGAATCCCCCATCTCCTCTCACCTACTACTCTGAATTCCTCGTTC
TTCCTCATCCCAATTCTCCTCGTATCCAGACATGTGTTCCCTGTAGAAACTCTGATCCAT
AGCAACTTGTGTGCCATCGTGAGTACAAAGGGGTGAGATATGTGTGTGCAATTTGGGTTC
CTAACACTATGTTTCAGCATGTTGAAGTAAATATAGCTTGTTGATCACTGGCAATTCAGA
GGTATTTAGCTACGAATCCATGTAGAAAAATAACAGAACACGTGCCAGCGGAGTGATAGG
TCTGAACTCTTCTTCAGGAGTGGATCAATCAATCAGATAACGAAATTTGGACTGAAGACG
GTCGTTTCTGATCAGCGGATGAGATAAAATCATGTACCACTGCAGTACAACACGGCGCGA
TTCGGCTTACCATCTTGAGCTCTTCTCCCGGGGCTGGGGCGGCGGACGAACCGGCGGCCG
CCCGCTTGGAGCCCCGTGGCGCCGGGGCAGACGGGCCCGGCGGGAGGCTGAACCTCGGCC
TCCAGGAGGAGGACAGGTCGAGGAGGAGGCCGAGGAGGAACCCGATGGCCAGGCCCGGGA
GGAAGTTGGCCGGGCGGAGGCCCGCCGCCAGCCACGGTTCCTCGTCCTGCGAAGGGGGGC
AGAAGAGAGGGTTAGGGTTCAGGTGCGGAGTCGCGGGGAGTGATATGAGTGGAGGTGCAC
GCCGGAGGCCGGAGGGTGGGTGGTGCTCACCTTCCTCTTGCTGCCGTGGTTGGGGTTTCG
CCGCGGCGGAGCAGCCATGGACAGTGGCTGTGTTGAACTGAACTTTGTTTTTTTTTTTGA
GGGGGCTGTGTTGAACTGAACTGTTAACAGCGTCGTCGTTTTACTATATGGGCCAACAAT
TTGCTATGGGAGACGATTGTGGCCGGTGCGCCGGCCGAAGATTGAGCCGGCTGCGCGCGG
CACGCACATGGCCTCCCTGCTTTCTCTCACTATGATGTGTCCCACGGGACCCGCGCACCG
CTTCAGCATCTTCAATAGATGTTGTATATTTCGGTGTCATAAATTACATGTTGTATAATT
TACAAAACCAACAAATGTGTTTTACAACATCAAAAAACAGCCATCCAATAGATGTTTGAA
AACGGTGTTGTAAAAATCGGTCGGCTGTCAAGCTGTTGCTGTTCGGTTGTTGTCGTTCGG
CTGCACAACCACTGTTGGTTGGCTGCCGGCCACATTTATATAATTTAAAACAATCAAAAA
TGAAATAGAAAATATACATGTCCACAATATCGAATTGTTACATAGTTCATCAAATCCACA
ACATCAAATACATCACACATACAACATCCGATGAGGATGAGTAATTGTCCNNGTAAGAGG
AGCCACACGAGCTCATCTACAATGCGGAAAATCAACGGTAAACCGCTTTGCATCCAACAA
AAAAGCTCAAGTTCATCTACTTTTACCCTCGGGAATTTTGTCGAACACCTTGCTTGCGAG
GTGGAAGAAATCGGCCAGCGGTGCGGTCAGCAGCCGGGCGGCGGAGCAGTAAGTAGCCAG
GAGCAGTCAGCCGGCGACGGAGCGGAGCGGAGCAGGCGGGCGGCGGAGAGGAGCGGTGCG
CAGGCCGGCGGCGGCCTCTTCACCGAGGAGGGGGAGCCGTCGGGTGGCGGGTGGCGCCGG
CACCT