Contig Data
morexGenes
Links



Map Locations of contig_41339 (4338 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_41339

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_57006 1 1366 bp AK369519 Available Available None





CDS Structure of MLOC_57006






Contig Sequence (4338 bp)

>contig_41339 4338 assembly3_WGSMorex_rbca.fasta
CAGGGAGACGAAGACCCTTCTTCTTCGTTGTTGGTATGATTTGGTGCTGTTGTTCTTTTC
CTTCCATCTGCGCTGTTGCTGGTGGGAGATCCTGCTTGTCCGGACGGATGGCCCGGCCGC
GGTCTAGTTGCAGGTGTGTTGGATTGATGTCCATGCCCTCTCAACACTGGTGTCAAGAAA
GGAGGAAGCAGTGTAGCGCCAATTGTACCGTGGTCAAAGAAGATGTCCATGCCCTCTCAA
CGCTGGTGTCAAGAAAGGAGGAAGCAGTGTAGCGCCAATTGTACCGTGGTCAAAGAAGAT
GATCTGCTTGCAGATCCTTATGCTGCAAGAGTCTTCTCTCAAGATTCAATGATGATGACA
CAGGGTTTCGAAGATCTTCTTGTTATGGTTGTCTTAAGTACTTTAGGTGTTCATGGTCCT
CTGTGTTTGCGGTTCAGTATGCTTGTAAGGGTCAATTTCTTTGTACTGATTCATGATATC
AATGAAAAAACTCTAAAAAAAATGCATAGCATGAAAGAAAAAAGCCAAGATGAACATGAA
ACGGCCAGCATAATAATCACCACATAACCACCCAGACGTTATAAGCTACGCACAGCAATA
GCAGCCAACAGGTTCACTTGAAAAAGTGCACAAACAGTTCACAGTAGCAAGGGCGTCTTT
CTTGTTTTCGGGTTGGGAATGCCAGAAACTAAGCGTTCATTCCTCTCAAAAGTACTTTCT
TCAATGTAGACGGGTCGATGGTAACCGCAACGTGCGTGACAGGAAACGGTCTCATTTCTT
GTTGTTGTTGTTCAACATCTTGAGCGACTGGAGCCCAAGCAGCAGGTCGCCTGAGTCCAG
GAACACCTTGTTGTTGGAGACTGCGATGGTGTGGGCGATCTCCCTGGCGGCTTCAATCTG
CCTGAGTGCGACGAAAGCAGGGTTGTTGGCGATGGCATTACCAATCAGCTCGGCACTCTT
TGCCTCTCCCTGTTCACATACAGAAAGGCACATCAGCGTTTAAATCAGGTGATCTAAAAT
AAAACAAGTGAGATGTATGTACAAAATAACAACCATTTGGCTCAGGTGATATCAAACTAA
GCAAGCGTAGTGAAATATACAAAGCTATTAAGGTATAAATAACATTAGCAATATGCCTAT
ATTCAGCACTGGAAGTGACAGTATGAACATAGAAAATGTCAAGTCTGAAACTATATTCCG
TCATATGAACATACCACTGGAAGTCTGAAACCATGGTCAGTACTATGAGCATACCAACAT
GCCACTGGAAGTCTGAAACCATATTCAGCCATATATTCAAGTCTGAAACTATGCTAAGTT
ATACAGTACAAACATGACACTAGATGTCTGAAACTATGTTCAGTCATACGGCATACCACT
GAAAGTCTATAACTAAACTACAGACATCATATGAATTGAAATGTACAAATTTACTAGAGC
CAGGGTCAAGACATAAACAACACTAGAAATACACTGACTCACGCTGAAAGTCTGAAACTA
TGAATATCACAAATAGGTGAAGCCATATGAAAACAATGTACCATAAACTGAACAAATGGA
ATGTACATGCCTAGCTGTGTTAGAATCAAACGCACCAAAACTCCACAAGTGTAATGAAAT
ATATGATTGAAACTGTCAACAGGTCAAGAAATTGAAGCAGTGTGAAAAAGAAATATCCAA
TTCCTGTTTTGCTTACCTGTGCCCTGATAATTGCACTTTTCTTGTCTTGCTCAGCCTTCT
CAACGATGAACTTAGCACGCTCAGCTTCCTGAGCAGCAACCTGTTTGGCTTCAATGGCAT
GAGTGAACTCTTTACCAAAGCTGAGACTGGTAATGGACACATCATCCAGAGCGATGTTGA
AGTTCTTTGCCCTCTCTGTCAGAATCTTCCTGATCTCCCTGCTCACAGCCTGCCATTACA
TAAAGGATGAGTTAGCACTCCAAGTAACATATTCCAGGTAAGACCAGCTATTATCCACTA
TAGAATGGAAAACATGTACACGCAGCAAACATGGTGAAGCTGTACCTCTCTCTGTGTGAT
TAGCTGACTGGCATTGTATTGTGCAACCACAGCTTTGAGTGTTTCATGAATGATTGAAGG
CAACACTCTCTCATTGTAGTTCTCCCCCAGGGTCCTGTACATAGTTGGTAGTCTCTCTGG
CATGGGTCGTGTAAGAACACGAAGACCAATTCTCACCTGTCAAAATTATCAAGCAGTATC
AAATATATGCAAGGAGGTGCAGTATAAATGCTACTTCTGAAATACGTGCATGAGCACAAA
CAGATTCACAGCATTATATAACTTGTTCAGCATCAGCTAGTCGTCTTAATTGACATAGCA
ACATATAATGATGAAGCAAAAGAATGTAGTACTTGTGAGTTGTGACTGATGTCAACAGAT
TCAAAGTGAATGGGTTGAAATGCTCATATTGACAGGCAATATATAATGGATAACACTGAC
AATAGATTAAAAGCAACAAGCAGATTAACTGCCATGACTACTGCTTATTCACAGAGCAGT
AGGCACTAGACAGTACAAAGGCTACATACAATGCTGTAGGATTTCACATATAATCTGACA
TGGGTCGCGTTAAAATTCAATAAGTCGAGAGAAATTGACTCCACCGATGCTAGGTACTAC
AGTATAACATAACAGCTGTTGTCACCGTAACTGGGCATTAAGAAATGATAACGGAAAACA
CCATTCATGTACCAGACCTGACCCACCAATCCAAATTGGCAACCACTTGAGGTGTACCCA
ATCCCCTTGCAGGCAACAGTTGCAGAATATGCTCGAAATGACAATGCAAAACAATTTATA
CAGGTAAAAATTGCTAGCCAATCATTTCACATGAAGCAGATCCTCTGACATGGCCAACTA
AAATCAGGCCCCTTGGTCGGTCACAAACATTGATTTCGCGAGCGGGTAAGCGGTAAAAAT
CACGAATCTGCGCTAGGGCGGGGAGGGATCGAGAGGAGGGGAGAATCACCATCTGGAGAT
CCCGGCTCCCGGAGGTGCTCTCGACGAGGTTTGGCCGCGCGCGGACGTCGTAGATGATGG
GCCTCTCGAACCAGGGGATGACGATGTGGGTCCCCTCCGGGTAGACCTGCGCAGACAAAG
GCGACCAGATGTCAAATCGCGTAGAGGAACGGCGGGGAGCAAGCGAAGCCGTGGCGCGCG
CGGCCGGGATCGACGGATCCGCGCGAGGGGAGGGGAGGGGAGGGGGTAACCTTGTCCTTG
ATCCCCTCGAGGCGGTTGAAGACGATGGCCCGGTGGCCTCCCTCGACGTTGTAGAGGGTC
TTGTTGCCGAGGTAGAGCGCGGCGCCGCCGAGCAGCCCGAGCTTGACCAGCGCGCCCACG
CCCGCCGGCGCGCTCGGCATCCGCGCGCCCTTGAAGTTCATCTCGCCGGAGCCGCCGGGG
GTTTAGCTAGGGTTTACTCGGCCGATTTGGGGGAGAATGGGATGCGGGGGAGGAGGAGGA
GGAGGCGGGCGGAGGATGGAGAAGGGTGGGTGTTAAGTGGGTTTGGCCGGTGGGTCGGTG
GCCGTCGGATCTCGAGCGGACGGCGCAGATGGGGCGGCGGGGCGCGTTTCTTTCCTCCGC
TGCAAGAAAAGGGGAATGGCTGGCTGGCTTCCGGCCCAAGAAGGCCTCGCGTGCCTGACT
CCTGGGTCCCGCGCGGATGGGATGGTTGGGGCATTTCGGTACTGTGATGGGTCAACCTGC
GCCCGTCACGACTAAAGTATTTTTTTTATTTTTTAAAAAGGAAAAATCCAAAACAAACAT
TCAACTTATACACGAAAGTTAAATCAAAGTCTGAATTTTGAATCCCGAAAATTGATAATG
TGAACTTGTAATCCCCATCTATTTTGGACCCTATACCTGATTGGCAAACTCGGATCTCTA
CAATCCCGACCGGGATAACCTACTACTCTCACGCGTGAAAATTTGGGTCGGCCCAATCTC
CCTTAATAATAAAGCACGTAGTGCTTCTGTCGTCCGTCGCGTCGTTGTCACTTTTGCACA
AAAGTCCCTTCACTTCTAAAGTCCCTTCACTTCTGAGTATTCAACCCGCGGTCCTTTCTT
CATCTTATCCATTCGAGAGGAGCGGCGATGGCGGAGCGAGGCAGCGCGCGTGCGGACGGC
AAAGGGCGTCCATGGCGGTCTACCGAAGACGCTCGCCGCTGATGTCTCGAGAAGATGAAA
CCCGCAACCTCCTCCTCCATTCGTTTTCTCGTTTTCTCTCTGAACAGGGACCGCCATGGA
CGCCCGAGGTCCTTTGCTACGACCATGCCTCCGGCNGCCTTGTGACTACGTCGGCCAGGA
GCAGCGACCAGGTCATGC