Contig Data
morexGenes
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Map Locations of contig_41158 (6050 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_41158

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56796 1 915 bp MLOC_56796.1 Available Available None
MLOC_56795 1 300 bp MLOC_56795.1 Available Available None
MLOC_56794 2 1218 bp MLOC_56794.1 Available Available LOC_Os08g15460.2, FRAME:+1, EVALUE:9e-34, 13108.m01652 protein preprotein translocase subunit secY, putative, expressed





CDS Structure of MLOC_56796






CDS Structure of MLOC_56795






CDS Structure of MLOC_56794






Contig Sequence (6050 bp)

>contig_41158 6050 assembly3_WGSMorex_rbca.fasta
TGTTCTGTTCAGGATCGTCGAACGCACACTTTGGTTGGGGCTGGCCCTCGCCGCCGTGAC
TCTCAAGGTCTTTGGGAGCTTGACTGGCTTCATGTTCCTTCCGCTGCCACCACTATCGCA
AGTCCATTCGCTTCTGTGGCTTCAGCTACCGGCTCCTTCCAGCAGTGGCATCATCGACTT
GATCATCTTTGTGGTTCTCGTTTGCCGTCTTTAGTTCGTCGAGGCCTTCTGGGGTCTGTC
TCAGGAGATGTCTCTTTAGAGTGTCAGGGTTGTTACATGAGTTTCGCGCGCCGTCGCTCT
CTTCCAGTTACACGTGTTGACTTGTCTTCTTCGTCACAGTGAAAGGGGGTGTTGCAGTAT
ATGTGGATTGCACTAGCCTTTTCCATAAGTTCGGACTTTTGGTTGAGTTGGCTAGTGTGT
GAAGCTTAACAAACGGGAGCCGGACCTCATACATCGGAATGAACTAGATCAAAAGGACGT
TGAGACTGAGACATTGACTCGTTAGTATGATATGGTAACTCGATTTGTTTGTCAAGCCTA
CAACCATGATACTCTACGTCTCCTGAGACAGACCCCAGAAGACCTCAACACCTCAATGAA
CTAAATACAACAAACAAGAACCACAAAGATAACCAAGTCGATGATGCCATTGCTAGAAGG
AGATGGCAGTTGAAGCAGCGGAAGCAGATGAACTGGTAATAGTTGTGATAGCCTGGCTTA
ATAGGGATGATAGACTACTCATATCAATGCGGGATTCCTTCTTTTTCGGGAGCCCATTCG
GAAAGAACTCCAAAGTTAAGCGTGCTCAGCTTGGAGCAATTTCAGGATCGGTGATCGACT
AGGAAATTGGTCCTAGGTGCGCACGAGTGAGAAAAAGACTAGTGTTGATCTGTGGGGACA
GTTTAGATCCCGCCAGGAGTAACGGCCAATAAGCGGCAGGTGTGTCCGGGGCGTTACAAG
TTAGTATCAGAGCCAACCCTCGCGGTTACACGGATGTTTGCGGGTCAGGTCCGCGGTCAT
GTTGTGCATGACATTTGTGATCCGGTTTGTCACACGACATGGCACATGTGCTGGACTGGA
CGCATAGACGTGTGCCAATAGGGAACGTTCCTGTGGGCCGACGAGGACTTCAGTTCCTTT
GAGTGGGGGTGTATGTGATAGCCTGGCTTAACAGGGATGATAGACTACTCATATCAATAA
GGATTTCCTTCTTTTTCGGGATCCCATTTAGAAAGAACTCCAAAGTTAAGCATGCTCAAC
TTAGAGCAATTTCAGGATGGGTGACCTTGATCCCAGATGTGCACGAGTGAGGACAAAGTG
CGCAGGAAAGACTAGTGTTGATCTGTGGGGCCAGCTAGATCTCCGCAGGAGTAACGACCA
GTAACCAACGGGTGTGTCCGGGGCGTTACAATAGTGGTGGCAGCAGAAGGAACCTGAAGC
CAGCCTAACTCCCAAAGACCACGAGACACAGGGGCAAGGACCAGCCCCAACCAAAATGGG
CGTGCGACAATCTTGAACAGAACAAGGATCAACGTCAAGAATGACACGACAACAAGGGAC
AGTAAGCTGACCAACAAAAAACAGATTCATGGTAAGTCGAGCAACATGAGCAACATCAGG
TTCAGAATAAGGACTGGTAAGAGTGCCTCAACTAGCAACAGAAAGCAGAGTACCACCAGT
TGTGAGTACATGAACAAGAAAATCAAGAGATCTAAGAGAGGACAAGGTGGAAGAATCAGA
AGACATGAAAGGAAGTTCCAAAATCTAGAACCCACGGATGAAAGTTCCAAAATCCAAAAC
CCACGCGAATGTACCTGAATGTGTAGATGGTGATTGCTCATTGCAAGAAACATCAGTCAC
AGAACCTGAACCTACAACACCCGTGGAAGGAGAACCTAAAGTGGCAAGCACCTGAAGTGG
CGAGAACCTAAAGTGGCAAGCATACGCTTAAGTTGCACAATATCCTGCTTAGTCAAGGAG
ACACTTGAGGGTGCCGGAGTAGAAGCACAAGTCCCAGAAGAAGATGTGCGCCCCTTGTTG
CGCATGTGCCGCTTCTTCATTAAGCAATCAGACTCGGGATGACCATCCTTGTTGTAGTAG
CCGCAATGAGTATGAGAGCAACCCTCACCACCAGGAGGTGTGGGCAGGAGCGACGGAGCA
CGAGCATAGAGCGAACCCCAAAGTAAATCCGCAACACGTAGGCGAGTATCCTCAGCATGA
ATCTCAAAAAATGCCTCCGTAAGAGAAATACGACGACGAGCAAACAACTGAGCGCGCTGT
GGCTCAAACTCCTAACGAAGCCGAGACAAGAATTCATAGACGCAATGAAACTCCAAGTCT
GACCCCACAATCTGGCAACACTGGCAAGAACCACAACCAGCAGCACGAAAAGAGTCAAGC
TGTCGTCAGATTGCAGCACTCTATGTGTAAAACTCATCAACCGTGGAGTCGCCCAAGAGC
ATGCTCCTGATGAAACACAGACATGTATAAGGCATGACCAAAGGCTGATAGCGCTGTCCA
AGACGGGTCAACATCTCAAAGACGGTAGTGAGGCCCATAAACTTAGTGTCAATCGGAGGC
AGAACCACTGAATGTAAGCAACATAGCCTTATAGTAAGTGGGAAGAGCCTCCTCATAGAC
CAAGACCCGCTGGGCATAAGCACAAACTGCAGCATCATCAGCAACTTTAGCCGCATTCTT
AGCAGCCAGTGAAGCATCCGTGGCAAGAGTCGGTGGTATCGATGGAACCGGGTGCGGCGG
ACAAGGGACCTCACTGGAAAGAACGCCCCAGAGACGAATGCCACACCTATGAATGCGCAT
GAAGGCAATGAACTCGGTGTCCCCAGAGACGAATGCCACACCTATGAATGCGCATGAAGG
CAATGAACTCGGTGTAGTTAGTACCATACAAAATCACTGGGCGACGAGGAGTGGCGCATA
GCCCGACAACGAAGACATGATGCACCTTTTTTTTCCTTTTTCGTTATTTAACTAGAAGAC
AACCAGCCGTATCAGCCCCAGTTTGATTAAATCAAAGGCGCAGCCGGCGGGGCCGTTGAG
CTGCAGGGTGGACTGGAGCAGATTAGGAGCCTCCGATTGCTGGGCGTGGGAGGCTAGCGA
GCGTCATGGCTCTGTCTGGTTGCGGCTGTGGCCTGATCCAGTGGGGGCTTTGACCTGCAG
GGCTGGGTGACACGACCGAAGGCTGTAGGGCCGGGGCGGCATATCGGGAGCCGCTCCTGG
AGCCGGTGCGGAAGATAGCGGTGGCAGAAGGGAGTTTGATACGGTGGAGACCTGCAGACG
GGCGGGATCCAGCGGGTGGCGAGGTGAGTTGACCTGCAGGGCGGTTGCTCCTGTACGGGC
CAGGAGAGTGCAGATCAGGGCAGATCGGGAGGCAAGCAGCAGCAACCGGAAGGAAACGGA
GGCGCGGGAAGGAGGGAGCAGCGATGGCCAGAAAAACAACGGCGGCGACGCGGGATTAGA
CCTTAGCATGAATTGCGCGTGCGAGAAAATAACCCAGGGTTCTAATACCATGTTATGCAA
CTTGTACTTCCTGAGGTCCAAAGGCCAGGAAGGCTATACATGGAACATAATATAACTCTT
AACATTCTCTTTCTGGTGATTTCCTTTATTTATTTTTCCTGTTACAGAAGAAATTTGTGA
TTTATTTGTTCACTTGCATAATCAGTTGGAGATACGTCTTGATAGTTGAAACATGGACTA
ACAAACAAAAATCCTATGTCCTATTCATAATTGGACGGTCAAATGGTTGTCCTTGCTAGT
GGTATGGGTCACTGTGTATAATCGGCTGATGCAGAACTCAACATAGGACGATAAATGCTA
CACATTTACAATTGGCACTTTTTTTCTTCTTTTCATTAGATTCTTCATAAATTTACTATT
CCACTGCATATGTGATACTCCCTCTGTTCCATACTAGTTGTCGCTCAAACAGATGTATCT
AGCACCGAAATAGGTCTAGATACCTCCGTTTCAACGACAACTAATATGTGGACGGAACGG
AGGTAGTAATTTGTATGATGCAGTTGTGCGTTTTCAGACAGCTGGACAATATTTCTCACT
TTGACTAGGAATTAATACCACTTTTAGTTTGGAGATCAGTGGTGACCTTACTCCTGAAAT
GTTCCTGTTAGTATTCCAGAAGTACTTCTATGTGATGTTGAAATGTCTAGGTCCCATATT
TCAGATAACTTTCATGTATGCATGTGAGAAAGCATGTGGCAATGCTAACCGCTAGGATCA
GAGAGGAGGCAGCCCTTTGGGCTCGGGCTGGGGCTGTTGGCCTGGGGGTAGTAGTCCTGC
CGATCACCTGGGATGTTCACTAGCCTAGTGTTTTTTCTTTCTGATTGAGCCTCAGGCTCG
GACCCTTGTACAGTTTTTACTATCCTCCTTTTCAATGAAATGAAACGCAAAGCTTTTGCA
CTTTCCCGAAAAAAAAAAAAAGAAAGCATGTGGCACTTCAGCCATGCATCAATTTTGGAC
AAATAGACTTAGAAGTACCACATCCAATAAGAAACGCAATCAACAGAACTGAAGCACATC
TGATTTTGTCCACTGTATCTCAGCAATATCTCACACTAAAAATAATTTGATCTTATTGCA
GGTTCTTAGTCGTATCTCTGTCCTAGGATCTGCCTTTCTCGCTGTACTAGCTGCTGGACC
ATCTGTGGTTGAACAAATCTCTCACTTGACAGCATTTCGGGGATTCGCTGGTACATCAGT
GCTCATCCTTGTTGGATGTGCAACCGACACGGCTCGGAAAGTTCAGACAGAAATAATTTC
TCAGAAATATAAGGACATCGAGTTCTATGATGTCAAAAGTTCTGACAAATGATTATCTTC
CAAACGTGTACTTCAATATAATCTCATACAAATTTGGTAGTATTTCATTATTCTTTTCCT
TTTTCTCTTCTGTGTATATCAGTTAGATCTCTTCTAGAGGATCAGAGTTCGGAAAGCATC
AAATATGTAAAAGATACTCTATTGCTGTGGAAGCTATACAAACTCATGTATATTTCTGTT
GTGGGGTGATCGGATGTGATTTTTAAACTTTATCTATATTGCTTCTTAAAGTTTTAGAAC
TAAAGCATTGGCGAGTGTTCAACATGTCCGTAGAGAGACTGAGAAACAGAGATGATATTA
TGTTCAAGTCAACTCAATTATTTCTCTGTTTCTTAGTCTCTACGTTTAAAAATCAATATT
GCAACATTTGCAACTCAATAGTGTAGCATATACTCTGTTGCAATAAATGTTTCACGCATA
TACTCCGAGCTCTCTTTCTCAAGTCAACTTAATTATGTCCACAACTTTATGCAATAGGGA
GTATATGCTACACTATTGCAACTCCCTATTAACTGGCATGCCAGTTTACGCATATGCGCA
CATTTTGCTTTTAGCTTTTAACAATGAAGAGGAACAAGGAAGACTGAAACGGGTACAAGG
TCAAATGGTGAGTGCAGCAAAGTCATCAATCTACTTCAGCCCGAACACACATGTGGATGA
TAAAGTTGTGGTATGCCAAATTCTAGATATAATGACAGAATCCCTCTCGGACAACTATTT
GGGTCGTCCATCGATGATTGGAGTGGACAAGGTTGATTGCTTCAAACATTTAATTGAAAG
AATTCAGAAACTAGTCAATGGGTGGAAGGAGAGAACACTTTCATATGGTGGGAAAGATGC
ATTGATAAAGCCTGTGGCCCAAGCCATACCTACTTACCTACTTATGCATGAGCGTATTCA
AAATTTTGAAAATAAATTGCAAGGGAATCACTCATGCCATATTGCATTATTGGTGGGGTG
ATGGAGAAAACCATCGTAAAATGCATCGGTTCGCGTGATGGAAGATGTGTGTTCCTAAAG
ATAAATGTGATCTAGGCTTTCGTGATATTAGTAGCTTCAACTTGGCAATGCTCGCAAAAC
AATGTTGGAGGCTCGCTGAAAATTATGACTCCCTTTGTTCCAAGGTTTTGAGGTCTAAAT
ATTATCCCACACGTGTGCAGGATAGTTAGAAGGTGTGTCTAGAGGGGGGG