Map Locations of contig_41016 (8190 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_41016

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56637 6 2616 bp AK357436 Available Available None





CDS Structure of MLOC_56637






Contig Sequence (8190 bp)

>contig_41016 8190 assembly3_WGSMorex_rbca.fasta
ACAAGATGGAGAGCGACCCCCACCTCGCGGCGCGCCACCTCCTCCAGGTGTTCGTCGACG
CGCCCCACCTGGCCCGCAAAACCCTCCTCCCGGACCTCTGGGCCCACGTCTTCCTCCCCC
ATCTGCTCCATCTCGAGGTCTGGCTCGCCAATGAGTCCGAGCTCGTCGCCGGCTGCGACG
GCGGCGACGCCGACGGCCGGAGCAGCAGGAGGATGAAGACCCTGCAGAGGCTGTACGACG
ACCAAATGGACAGCGGCACTGCTCAGTTCGCAATGTACTACAAGGAGTGGCTCAAACACG
GCGGCGATGCCCCGCCCGCCACCCCCTCCGTGCCATTGCCTTCGACGCCGTGGAGTTTCG
ACAAGTGGGAGAAGCACTCGTCGTCACTGCGCACGAGCTCCATCAACAGAAATCTGTGCG
TGAACCTCGTCAATAGACAGTTTGCTGTTTGATATGAGTCAATTAGGATAAGAATGCACC
ATCCAAAATTGGTATAAGAATGCCTTGAGATCATCTGATTTTTACAGGTACAATGCCGTT
TTTGGCATCTCGTTTGAGCAGGAGGATGCGAAGCTGCCTGATGAGGCCGAATATGTCTTG
GATATGGATGTGCAATTGGATGAAAATCCAGGTAGCTTGAAGATGGAGAAGCTTGCTCAT
GTGAGTCAACAGTTCCTTTCTTGCCATTATATATGGTGATTAGCCTGATAGGCCGACACG
CCACACGGTGTAAGTTTGTGCGTGTGTCTCTGATTAGGACTACCAGTATGCCTTGGACAA
GGGACAAGTTATGATCACTCATCGCTGTCCTGATAATTTGGATAGACAGCTGCCTGTGTC
CCAGGGTATCGTATTTGTTTTCTATGGTGTGGGGACTAGAGAATTTTGGCTGCATTTCAA
GCAATTTAAGGTGCAAGGCTGAACTAGAGCCCAGAGTTTTTAGTTGCACGTTAGAACATT
GCAATAGCATTTGCAGTACATATTTTTTCTAAAGATAGATATAACGGTAATTCTAATTTG
ACATTGCAAAGTTCATTCAGAGTGAACTGTACTATAGTGCTTCCAAAAATATTGTTATTG
TTATTGGTGTCTGGTAAATAGTTTTCGTACATCTTTGTGCTCATCTTGTTTTATTTCTCT
CTTAATTGTTGACTGTATTTCTCGCATTCATGTAACTTTCATGTTGCTATGGCTGAGTGC
CTGAGTTTTATTAGTATCCAATACTGAGAGGCCGAGGCTGTAGTTTTTCCTAGTATTGCG
AAAGTTAAACGAGCAAACAAGGTTTTAAGTTTTCGTTCCTTTAGCTGTAAAATTACACTT
TGCTTACTTGCAAATGAGAAGTTCTGTAAAGCCCCATGGTTCCATTGTGATCCAAGATAT
ACTCACAATCTGGATTATATCTGCAGAGAAGGGGCCAACTTTCCGGAATTTGCTTTTGGA
TCCTGGGCTCCATGGAGCCTGGTTTTTTTTTTTTTTTACAAAAACCGTATTTTGAAGTTC
AAAAACTTTTGAAAAAAAAAACTACACATGAACCTAGGGATGTATATACATCTCTGTAAA
TTTTCATGATGGAATACGTTGTGGTTCAAGCTACACACACAAAAAAAAATGATGTCTCTC
TACCACGTATACTATTTTCACTATAAAAGCCTATGATTTTATTTTTTTATACAGCTCACA
CCAAAGCGTATTTGATCATGAAACTTCACAGAAATTTAGTATACATCTCAATGTTCATGT
GTATTTTTTCAGAATTTTGGAAGATATGGAAGGTGAAAAGAAATGCTTTATCTGGGCTAG
TTATTGTTGAGAAACTTTAGTTCCTAGAATATTTTTATCTTTACACCCTCATAGTAGTTA
AAACTTAAACGTCAGCCAAGACTGACCTGAAACTGACATGATGGAACTGAGACTTCGAAC
ATGTCAAAAGTTGGAACCATTTTGATAGATTTGAAAATGCATGCATGATGTTTTGGCACT
GATGTTTGAGGCATGCCAGATTGTATCGTTAGTTTCTGACAGAAGCTGAATTGTTTAATC
CGCAATGTAGATGTTTGAAGTTATTTAACTTATGCTGTTTTGAGTAGACAGAGAAACATT
GGGCTACAAGAAAAGCAATCCAGCATTCGGAAAGAAAGCACTATTCCAGAAACAGCACCA
ACTCCACGCAAATCCTACTCGCTCCGATTACTCTCATGCCGTGGAGATGTAAGCAGGAAT
GTTATTAATCACCCTAAGGTCCCGAAGAGAAATGTCTCTGTTGAGAAAGAGCTAGATTGC
AGTGAGGTAGCAGTGACTCTACAACGAGCAGTTTCCACTGTATCAAATTCAGACAGTCTT
ACACAGTGCGAATACGCCGTGCACGAAATCGCCAGTGCATGTTCAAATCTAGGAGGGGGT
CCTAATCTTGGAACTTGGATGTCATGTCCCTCTTTTATTCAAGGGCTTCTCGAGGTCACA
TTCACTTCCAAAGATGATGCAGTACTTGAGTCAGCAATCTTGATAATGGGAGAGCTGGTT
TTGAGAAATGAGGTCAATAGGCAGATCGTTCTTAACGCTGACCCACAGCTTGAGGTTTTC
TTGAGGCTTCTGGCTCTGAGAAGCAACGGGTTGTTTCTGAAGGCAACTGCGGTGCTTTAT
TTAATGAAGCCAAGAGCCAAGCAGATGCTATCTATGGACTGGATGCCACTAGTACTGCAC
ATATTGGAGTGTGGGGATGAGGTGCAGCTTCTGTCTTCCCTGAAGTGTTATCCAAAGATA
GCTGCATTCTACTTTCTAGATCAGCTCCTTACGGGGTTTGACATCGACAGAAATGTCGAG
AATGCAAAACAGATGATTGCTCTGGGTGGTTTGGACCTGCTCATGAGCAGACTTGAAGTT
GGTGATGCCCGTGAAAGCAGAATCTGCATCTCTCTCTTGACCTCATGCGTCCAAGCCGAT
GGCAGCTGTAGATACTACTTGGCTGATAATCTGAAGAAGGAGCCTCTCGTTCAACTTCTT
GTAGGAAATCAGAAGAAGGCTAGTGCTGCTGCCCTTAACTTGATGAGCGAACTAACCTGC
CTTAACAGGTAAAATTGTTCTACAATCTTGATAAAGGTGTAGGTTGTGAGAAGCATATCC
TTTGTACTAAACTTGCAATTTTTTTATGCAAACCAGAACATGCCAGACGGTAGAGTTCCT
CAAGGAGCTGAAAAATGGTGGCTGCTTAAATACAATGCAAATTCTATTGGTCTATCTCCA
GCAGGCTCCTCCTGTCCAACATCCATTAGCAGCTGTCATGCTACTTCAGCTTGATCTACT
GGTAACAGTAACATGCATCTTGTTCGTTCGCTCAGTCAAGCTTCTCTGCTTTTGTACAAT
CTCCTTATCACAGTTTTCTTGCAGGGAGATCCTTTGCAGTACAGCGTTTACCGAGCGGAA
GCGATTGATGCTATTATGGCTGCCTTGGAGCATAGTTCACAGAGCGTAAAGGTGCAAGAA
CAGTGCGCTCGAGCTCTGTTGCTCCTGGCAGGGCGGTTTTCATCCTCGGGAGAACCCATA
GCAGAAGCATGGCTACTAAAGAGAGCAGGCGTAGATGGCTCCCTGTCGGAATCCTTTAGA
AGAACAGAGATTTTCAAAAATAAGGGTGCACGAGCGGTATGCTGTCATGCTTCAAAAACT
ATGCTGTATAATTTGTCATATAACCCTGTCTGGTAACTTCAGTTTTTCCTTACCTGGATG
CTGTGTTAATTCATAGGAAGAAGAGAAGGTGGTTGAAGAGCGGCTGAAGAAACTCGCCCT
CGTGCTGGTAAAAACCGGGAACAAACGGTTCCTTGCGGCGCTGTCAAACTGTATATCTGA
TGGAATCCCTGCTTTGGTCAGAGCATGCCTCGTAACCGTAGCGTGGATGAGCAGCTCCCT
CTCCCCATTGCATGGATGCAACACTTTCCAGCCTTTGGCGTGCTCCGTTCTCGCTGCTAA
GCTTCTAGATAGGTTGAGCTATGACACAGTTATGGAAGAAAGGGTGCTCGCTGCTCTATC
ACTGTTGAATCTTGTGAGACATCCAGGTACACTTCCTTTTGCCGTGTGTAACATACCATT
GCCATTGCTGTTTGTTTGCCTGAATTTATTTCCTAGTATAGTTTTCAGACTTTACAGTAC
ACTGTCTTGAGTAATCGTAAGAAATATTGCTTTCTGGGACAGTACATTTGGTAACTACAG
AAGTACTTATAATCAGTTTAAACCAGATTCATGAATACTGTAGAATTATGTGCAATTGTT
ATGATCCATGCAGTGCATTCTTAAAAAATGACTTATAATCAGCCACGCAATGATTTATAT
GAATTTCCTGTTCTATGCCGACTTAAATACCAAGTTTCATTTCCCGAATAACTTCACTTC
CGCTGCTCCGTGCGAAGCCTGAATTCTTGATCATTTAAGCCGACATTTCCTCCTGACAGA
ATGCTTGGAGGGGCTTTTGCCACTGAAGAGGGACACGACGGAGTCGTTGCGTGACCTGGC
AGATGTGACGTGGACCGCCAAGGAGCTCCTCTTTGCCTGCTGCAGATGACAGACCCTATC
TGAAGAGGGAATTGCTTCTCAGTGCATACCAGTATGGAAGAAGTGTAGCGATGGGTCACA
ACTAAGTGTAATTTTGCCCGTTTTTGTACACATTTCTTTTCTTGATTTGTAAAGCCTCAG
ATTTTTATTTCCCTTGGAACACATATATGTTTTCTCCTTGCTATGAGTTTATTTATTACT
CCCTCCGTCCCAAAATAAGTGTCTTACTTAATACAAATTTGTACTAGAGTTAGTGCAAAG
TTGAGACAGTTATTTTGAAACGGAGGGAGTATTTCCCTATGTAGAGACCTTGGAGCACGC
CCATAAGGCCAAGGACTCTAGTTGCTGCTAACCATTGTGAAGTGTGGTGCCAAGAGAATA
AGGATGCGTTTGGCTTGGTTCTTGCATTGTTTTTAGTCACTTTGTCAAAAAACTATCATC
TGCATATTGTTTTTGTTTGGTTGCATGCATATTCTCTTTCTCTCGCGTCGCCCCCGCACG
GGCGACGGGGACACGGGAAATCTCAACCGCCGCCGCCTAGTCCTCCCATGACACCCACCT
CCCCTTCGCCGTTGCTGGTGGTCGGCATTGGGCAAAGCCCGTGCGGCCGTGGAGGGCCTC
TCCTCCCTCCCACGGATCCACAGACGGCACGGGCGCCCGGACTCGCGAGGTGCGGCCCTC
TCGACGGTGCAGCGAGTCTCGGCGGTGGTGGGTTTGCTACAGTGCATGGATGCTCGGATC
CATGGGGTGTGGGTCTTCCGGCAGCGTGGCGGCTCCCGGTGACAACGACCTCGGGCGACG
ACAGGTTCGAGCGATAGCACGGGCCGTGCGGTGGCGGATCTCGCCGCTCCGGAAATCGTG
GAGGATTCTGGATCTGGGACGGCGGCCACGTTAGGCATGGTGACGGCATCCTCGGCTGGC
GACGCTCGCGGGTGGCAGGTGAACGACGTCTTGACCGCGTGGGCGGTGAGTTGCCGGTGG
ATCTCCTCCAAGTTGCAGGCTCTCCCGCGCTGCACTTGGTGGCTTGTGATCTCGGTCGTC
GACCTTGGTGCGTTCATGGGAGATGGTAGAGGTGTCATTGGACCGGAGGAAACTCTGGAT
GATTCGCTCATTTCGACGGTGGCGACGACCAAGGCCGCCGTTGTCCTCCTTGTAGGCGAT
GTCGAGGTCCCTTCCCTGCACCCCACCCCATGCCCGGGTGAAGACCAAAATCTCCTCAGA
TTGGGCGGTGATGGCACTGTGTGTGTCGTGTCCTTCTTGAAGGCGCCGCCTCGGGCGTTC
GGGTGCTCATTTAGAGAAACTGCAGGCGGAGGGGATGGGACGAGTGACAGAAGGTGGTGT
TCGTATTGGAGGAGCGGTGTGGCATCTGACACGTCGGCAACGACGGGTCTCGGCAGCATG
GAGCAGCGGGGTCTCGACGGTGGGCATGTGATGATAGACGAGCACATGATGGTGGCGTTG
TCGGGTGTCGTGGTGGCGTCGACGGTAGGTAGGACTGGCGAGGTTGATGCGTCGGTACAG
CTCTGAAGATGTATCGGTGGAAGATGGCGGCAACAACTTCTGAAAGTGTGCTGGACCGGT
GTGCGCCCCAGACCTGACACTATGGCTCGGTTGGGGCCTTCGGTTTTAGATGTAAGGATA
TGGTGCCAAGTCTGTTTGGTATTCGGCTCGGACTATCGGCACCCCTTCATCAAGGATAGG
AGTAGCAACATATGTTGTCAAGATGGTGACTTCAGACGTACTGACCTATTACTTTGTAAG
GTCTTTCTGAATAATTAATAAAGTGGCTGCATTCATCATCCAGATGCATCTTCCTTCTTT
TCTAAAAAAATATATTCTCTTCCTGCATCGTAGTAACGTCTCTATGTGTTTGGTTGCTCG
CATTGTGTGTGCTTATACAGGCACATGTTGTTGTTTGGTTGCATAAGAGCATAGAGTTGG
GGTAATTTTGTACCCTACTTGGCAAGATTACCCACTACTACTATACCTTACACACAATCA
TTTCGAACACATCAACACCAGAACACTACCATTGCGATAAACTTAACATAGATGGAGTTT
TTCAGCCCAAACGGACAATTCACCTTGCCAACTTCAACCCTGCATGCTTGATTTCGCACG
AACTAGGAGTAAGCATTGTGCTGCATGCCTAGTCTAAACTCTCTTTGGATGTTGTTGCTG
TACCCTGAAACTTGTTCATTATAATTTTTCCATGAAATGTAAACCCTAGAACCCTCCCAG
GGAACATCAAATACCACTTGTCCTAGCAGTGCAAAAGAGCAACAGTTGAAGCAGGAAGCA
ATGGAGCACACACAACAAGCAAAGGAGCACACAAATATCAAGTAGCGGGGAGAAGAGAAG
TAGTAAGCATGCATGATCATACAACATAGCAAGTTCAACCTAGCACTACTATATGGTGTC
ATCCTGCCACCACATCCAAAATAGGATGTCACCTTACCGCTGCAAGTTTACCATCATCGT
GAGGGGTTAGTATATACCACCTCACCAAAATATACGGACCATCAAGTTTTCAAGCCCTAG
CTACACAAAATGTACGTCGTCATCGTCATCGTCATCGTCGTTGCCATCACCATCATCGTC
GAGGATCATGCACACGCTAACCAACAACAAGCTCTAGTAGTAGTGCTTGCCCAGACAGCT
CTTGGGCCAGAGCACCCTGTGAGTGCTTGCCATGGCAACAAACCCAACACCCTCAGCATT
GGTGTACAGTAGGTGGCTCAGAGCAGCCATGGGAGCCTCATCGCTGAAGCCACCTTGCTT
CATGACGACACTGTACATGTCACGATGGACGTCGAGGAACTTGCTCTCCTTGATGGCAGT
GGCCACCTTCTTCATTGCTCGAGTCATGTTGCTGAAGACGACCAACTCATTCTCCATCAA
GGCCCCTCTTCCTCTTCCCAAGCAACAAAATGTGCTCACTATCCTTCTCCGGAGAATCTA
AGTTGATCTCTGGGGGTGTCTGCTGTCTGGATACTCGGGCATCGGCGAGCCTAGCAGCTG
ACCGAAGCCCATGGCATGCTTGCCGGTTGACAACCCAAAGGAGAAGAACTGGTACATGTG
ATGGTAGTTCTGGATGGATGTGTTGAGAAACTCCGCGTCCTTGGGATGAGCCTAAGAAAT
AAACATGACGGAGTGGTTAGTTAGAACGGCAAAGGTTCATATGCTTAAACAGTTGGTCAG
TTAGATTTGCATGGTTTGTGAGCTAACCGTGATGTAGCCTTGGTAGTGCTCCGCCACCAA
AAGGATCGAGCATGTGTCCTCATACCTTGAAGCACCGTTCAGGTCCCTAAGCTTGGGTGT
GGTGATCCACCTCGTTCTCCACTTCTGAGGTGGTTGTAGATCTGGATCGAGCTGACCTCC
TATTCACAAAACTTGAACAACTACTTTGCAATAGCATTTAAGTGCACTGATACGTCCATT
TTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTTTTCTCTCTTATTTTACAGGATTTACTTGGAGAGGGAGAATGCCG
GCAGTTGGAATTCTGGACTGGANAAGGAGCAAATCTAAGAGACCTATTTTGCACAGCTCC
AAAAGTCCTGAAAATTTACGGAGAGCAGTT