Contig Data
morexGenes
Links



Map Locations of contig_40856 (3416 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_40856

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56460 2 1390 bp AK361492 Available Available None





CDS Structure of MLOC_56460






Contig Sequence (3416 bp)

>contig_40856 3416 assembly3_WGSMorex_rbca.fasta
TCCCATGCAACATTCCCCAACACCGAGTTACCCACAGAAAGTACTCAACTTTTGGCATGG
AGGTAACCTCCGTATTGCCAGTGACCTCCTTCTCGGAGAGGAGGACGACGGTGGCTCCTT
GATTGTACCATCGAGGAAGCCCATCATGCCTGCTGCTCGAATGTGCGGCAAGACTTGCGC
CTTCCAAACGAGGAAGTTGTTGCGGGTGAGCTTCTCGGAGATGGTGTGGCGAGAGCAGCG
AGCGAAGGGGCGGCCATGGCAACGGGGGTGGAGGCGGAACACATGATCGAGATGTATTGG
AAGAGACAGGCTCTATATACCATATGAAAGCGATAGGTTAAGTGTATGCCTTTGGGCAGA
GACGCGTTGCGTGTTATATAGGGGGCCGAAGCCAAAAAATTACATCGGATTACAACGAGA
GGTTGGTTGCGGGGTGGATTGATCTCCAAGGATTCAATCTCAACAGCCCAACAATCCATA
ACTAACACAACACTAGAGAATCCTAGAGAGATACGGTTTATAACAACACCGTATTTACCG
AAAAAGGATTTTCCCCCGCTTTGTATAAAAAGCAACCAACACCGTAGAGAGAACTTTTAT
GGGGCAAACAACACATCAAGCACATAATACAAAAAAGAAACAAATGCCAACAGCGGCAGC
TCGACAAAAAGCGGATGACCCGCCACCACTCTGCCTTCTAGAGACAAACCAACACAGCCC
GAGACTCCGATCCGCCGCGTGCCAAGCAGAACCTCCAAGAAGGGATGTGATGACAACGAC
GCTGCTGCCTGGACGAGTCCTAAGGTTTCCCCCGACAGATGGAAGGACGCAGGGGATGGC
TACCACCGACACCCTCAGGAAGAAATTGTTGCACCCCTCCGTGTCACCGCATCCGAGCCG
GACAAACCGGCAAGGATTTCTACCGCACTCCAAACCCCACCGTCCATCCAGAGCCGACCA
GCCAAACCACCGTCTAACCCCATGCGCGAGCACGGTTGTGCCACCATCCACGCAGTCTCA
CTGCGAACACCAACATGAGGCCAATGAGACCAAAGAGCTGCGCCAAACGACGGAGCAGCG
ACACCGAAACCGAGCGAGAGGAGATCCACCTCCACCGCCGACGCGCGGGAGGCCTCAGCC
TCCGGCATCGCCGCGGCCATCGACCGGACACGGCATCAGGGCATACCAGGCCACCCCTAG
CGCAGCCAGGCCCAAAACAGGCCCGCTAAGCCTTGCCGGTCATGGTGCAGCGGGTTGGCA
GCGACGTCGCCAACACCCAACTGCCCGTCGTTGCACCCCCGCCTCCCGGAAGTTCCGCTG
CAAACCCGCATCGCCGTTGGCCGGCCCAGGCCCAGGTGGGCCCCGCAGGGCCCAGATCTG
GGTCGGGAGGCTGTCACCAGATCGTGCTGCGGCGTCACCCCACCCCCAACTATGACGCTG
CCGCCGAGCCGTCCGTCCACGCCGCGCCAGGGAGTCCCGCTGCCGCATGGACCGTTGCCG
CCTAGGAGCAACCCGTGATGCAGCTCTGTCCCGCGCGGGAGAGTCACCGCGAGGGGAAGG
TCATGTGGCAGCCGCCACCAGAGAACCCGGGGCCAGGCCGGCCGTAGGTGTCAGCGACGG
CGGCGGAGAGGAGAGGAAGAGGGGGCTGGAGGACGGGGAGGCAGGCCGTGGCCGGTCGCC
CGGGGGCCACACCGTCGCCGGAGAGGAGGTGGGAGGGTAGGAATTTGTTCCCCTTCTTTT
CAACACCGTATTTAAAAGTTGTTTAACACCGATTTCAGTCCTCATTTTGAAGTTGCTGCA
ACTTGCACACCCACAGTCCACACAGATGGGGAAATGACAAACTATCAGTCGTACTTTGCT
ATCGGTTGGTCGCCGAAGTCACTCACATCGTTTATTTGCCAAAGAAAACCGACGCCAAGC
TTCGAATCCATATGCATGGCGCTGGCTATAAATCCACGCTCTTCCTTTTACTTGTTCCCC
ATCCTTCGCCTCCTCATACTCTGCCCTCTCCACAATCCACTTTAGCAAAGCATGGCACTC
ACTCGCCTCCTCCTTGTCCTCCTCTGCGCGGCATTGCCTATGCTCTTCTTCTCCCGTGCA
GGTAATAACCGTGACCTATAAATTAAGTTCCGGCGGGTGCAGCAGCGTAACAGTGGCATC
GGTTTTGATGTATGTGTATACAATGCAGAGGCAGGCGAGGTGGGTGTGAGCTACGGGAGG
ATCGGGAACAACCTGATGGACCCAGCGTCGGTGGTGCAGCTGCTGAAGCGCAATGGCATC
ACGATGGTGAGGGTGTACGACACCGACTCCACGGTGCTCACCGCAATGAAGAACACCGGC
ATCAAGGTGGTGGTGGCGGTGCCCAACGAGAATGTCGCCATTGCGGCCGCGGATCCCAAC
TGGGCTGTACAGTGGGCCAAGAACAATTTGGTGCCCTATTACCCTGCCACGGACATCCGC
GGCGTGACGGTAGGGAACGAGGTCTTCAACCAGGCAAAGGGGCTCACGTCGCAGCTCCTC
CCGGCCATGAAGAACGTGCAGGCGGCGCTGACTGGCCTCGGCCTCTCCAACGCCATGAAG
GTGACCACGCCGATCGCGTTCAATGCGCTCAAGAAATCGTTCCCGCCATCCGAGAGCTTG
TTCCAGGACGACATCGCCCAGTCGGTGATGAGCCCCATGATCGACTTCCTCGAACAGACG
GGCTCCTACCTCATGGCCAATATCTACCCCTACTACACGTACACGTCCCAACCAGACACA
ATCAACCTCAACTACGCGACGTTCCGCCCGAACGACGGCGTCGTCGACAATAGGACCGGC
ATCAGGTACGACAACCTGTTTGACGCCCAGCTAGACGCCGTGTACTATGCGATAGACAAT
CTGCGGGCCTCCTCCACCAAGCGCACCGTGGAGGCCATGCTCAGGGGAACGCACCGCCGG
AGTGTGCCCGTGGTAACGGGGGAATCCGGGTGGTGCTCCTACTGCCCACAGGCGGTGGGG
GCCACCAAGGAGAACGCCCAGGCTTACAACGCTAACCTCGTCAAGCACGTGCAATCTGGC
GGGGCCAGCACCACGTACAGCTCGCTCGTCGTCGGCGCCGGCACCGCCGCCGACGACATC
TCCGTCTACATCTTCGCCCTTTTCAACGAGAACGACAAGCCTGTCGACGAGCGGAACTTC
GGCCTGTTCGAGCCGAGCGGGCAGCCGGTGTATGCGGTCGACTTCAGGGCCGGCAGCAGC
CCCAGCCCCAGCCCCGGCCCAACCAAGTCCAGCTGGTGCGTGGCGAACGCGGCGGTCGGA
GACGCTCGCCTGCAGGCCGCGCTGGACTACGCGTGCAGCAACGGGGCGGACTGCGGCGCC
ATCCAGCCAGGGAAGCCGCGCGACGAGCCCCACCCCCAGCGCGCCTACGAGCACTA