Contig Data
morexGenes
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Map Locations of contig_408062 (3116 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_408062

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56414 2 2080 bp MLOC_56414.1 Available Available LOC_Os09g39230.1, FRAME:-1, EVALUE:0.0, 13109.m03928 protein prephenate dehydratase domain containing protein, expressed





CDS Structure of MLOC_56414






Contig Sequence (3116 bp)

>contig_408062 3116 assembly3_WGSMorex_rbca.fasta
GCATATACTACACCACTCCTTATATTTTTCCCACGGGGTTTTTGGAGGAGACTATTTCAA
GATGATGAACACGCTCAAGGACAAGTATAGATTAGGGGGAGTGTTAGAATTTAATTAATT
ATGTAATTAATTAAGTAAAACCCTACTTGTAACCGCACGTCGATCTCTCCCACGATGCGG
AACCGACATATCCTTCCTGGAGCGTCGCCTCCAGGAACCGCCTTTCCCCTGGCATATAAG
TGTTCATCATCAAGGAATAAGATAGACAGTTGATTTATTTTACTTCTCTCTCGTTTAGAT
TACAACATGAAGCACTTTGCATGGCTTAGTAGAAGAAAAGATTTTAAATGCGTTGTTTGG
TGGGATGATGAGGTGGACACCTTGCATGTTGAGAGAATTGGCAACTTCTTAAGAATGTAA
GATTTGATGAATTTCATTAAGTGGAAATGAACGTGGAAGTACAGTTTGAAATCCAACATG
CATTGCAACCTTCCGGTAAGGGAGGAACCAATTATCTCCGCATACACCACTGATTGAGCG
CCCTTCTCAATGGATTTGTCCACGAAACACTCAGGAGGGCCAGGAAGGAGAAATGGATCA
GGACCAGAAGCACATCATCGATCAGCAAGCAGCCAACCAGCCGAAATGTTTCTCATAATT
GAACAAATCATCAATAAAAGGGAAAAGGAATGGGATAAATTGACAAGCATTTCACATGAT
TGATCACTAGCATGCCCTCGGGCCTCACATCCCAACTAACATAGACCCTCGTGTCGGTGT
CATGTAAGCTACATGACCAGTCCACTTAACGGTACACATACTAAAAACGTGGACCGCATG
AAAACCATGTAGATTGGCTGGTACTACGTTTTTCCTCTCCAAGACACCTTATAAGTCAAA
TTTATTTTCTTTTTTTTACACTAGGAAATTATCTATTATCGGTAGCATATGCTCTTGGGA
GCCGTTGTGCATTTCCTTGAACGCTTACAAAACATTTGAAATGACACACTAAAAGAAACT
AGGAAATAAAAGCCATCTCTTACAAGAATAACGGATTCTTTGGTTCCTTATGATGATTCT
GAAAACACGAGAAACATTTGAAACCATCACCGATCTTTGAAATCATAGAAAGCCACCAGC
CCACCACAACTGGGGCAGGTATTGTGACACATAACACTGATCTCGCGTTCTTCTCATTTT
TAACATCGTTTTTTGACCGGTGGGATCTGCCGTCCGTCATGATCCAACTCTCCAATGGGC
CCATTTCGAACAGCAGAAATACCAAAATTGCAGCAGAAATTACTTGCATTTTTATTTTTT
TGCATGTACACTTGGATTTTTTCTTCTCCCGGACAACCACACGCCCAGCCACCAACCAAT
CATGCTTCTGACTACCGACATCATGGAATCAATGCTCTGCTTGGTTGATTTCATTTCACC
CTGGCACCAAAAAGGAATTGCTGCGAATGGAAGAACAATCCAAACGCATGCCATCCACTT
CGAGCTGCCCAACCCCAAGAGGCACCCTCAACGGCACCAATGATTGACTTTTTCTCAACG
AATTTATTCACAAAGAATTTGGTCCAATGGCAGAGCAAAATTAACAGAGGAAAATCGCAG
CTACCAGCAAGCAGAGCATCAAAAGGGGATAAATTAACAACGAATTCTTGCGCACTGATT
GAATTGACTGTAATGTGTAACATGGAGCTAGCTATCATCATCTAGCCGCGCTGCTGTTGA
TCCGAGGAGGAGGAGGGGGAGCCCGACGACGACGTCGACGACGGCGCGGCGTCCCAGGGC
GTCATGTCCATGGGGTAGCTGCCGAGCACCCTGAGGAACGACGTGAACTCCTGGATCTCG
GCGAGCGCGTTCTGGGCGCGCACGTCGGCCATGGACGCCTGGAAATCGATGTAGAACATG
TACTCGAAGTGCTTGGCGGTGCCGATGTTGGCGTCGTCCACCAGCCGGATCGGCCGGTGC
CGGTGCGGCCGGCTCTCGATCTTGGTCAGGCTGATGTCCCGGAACGCGAACGCCGACAGC
ACCTTGAACAGCACGGAGGTGCCCTCCCGATCGTGGGCCAGCACGATGCTCGTCTTGAAC
GGCCGGTCCGTCCGCGGGATGATGGGCTCCCGCGCCAGCATCACGAACCGGGTCACGTTC
CCGGCGTCGTCCTGCACGCCGTCCGCCAGGATCTGGAGGCCGTAGAGCTCCGCGGCGCGC
GCGGAGGCGATGGCGGCCGTGTCCCGGAGGCCGTGCGCGGCGATGTGCTCCGCCGCGCCC
GCCGTGTCGTCGAAGGCCTCGCGCGCGACGTTGAGGCCCATGCGCGTCAGCGTGTGCTCG
CACTGCGCCAGCGCCTGCGGGTGCGAGATGACCCGGGCGAGAAGCTCACGCCGGACCCCC
GGGAGCGCGAGCAGGCAGTGGTGGACGGGGAGCTGCACCTCGCCCACGATGTGGAGCCGG
TGCCGGAGCAGCAGGTCGTAGTTGCGGTGGATGCTGCCGCCCAGGGAGTTCTCCACGGGG
AGCACGGCGCGGTCGGCGATCCAGAGCTCCACGGCCTGGAACGCCACCTCGAACTGGTCG
CACGGGATGGCCTCGCACCCCGGGTACGCCTTGCCGGCCGCGGCCTCGCTGTAGGCGCCC
GGCACGCCCTGGTAGGCCACCCGGAGCTGCGCGCCGTGCAGCGGCGCCGGGGACAGGTCG
CTGATGCTGAGCGGGCGCGGCAGGTTCCCCGCGCCCGCGGCCGGCACCAGATCCAGGCTA
AAGGCGGCGTCCTCGGAGCCGGGGATGGCCGGCGCGGCCAGCTTGTTGCTGTTCTGGCCG
TTTACCTTCGGCGCCGGCGGGGTGGGGGTGTCGTTGGTGCTGGACAGGATGGCGCAGGCC
GTCTGCCAGTCGCCGCGGCTGCCCGGGATCGCGCGCGCTGCCGCGGTGCCGGGTCCCCTG
CTCCTCCCAGCGAGGGGCATCCGCGGCGCGGCCGTGCTCCGGATGGCTGCAGCGGCCTCC
ATGGCCACTACCTACCAACCTACCGAGCTCGCCGCCGGCTGTCGATCTGCTTTCTTTGGG
CGGTGGCGGTGGAGGGTGTGTGGTTGGTGGCGCTCGTGGGTGGGGCGGGCGCCAGG