| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_40708
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_56302 |
1 |
475 bp |
AK370715 |
Not available |
Available |
None |
CDS Structure of MLOC_56302
Contig Sequence (6282 bp)
>contig_40708 6282 assembly3_WGSMorex_rbca.fasta
CGAGTGTAAGCCAACTCTCTATGTATCTCATCTTTTCAGTANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTCGTGCCAAATTA
AGGATAGAGTCGCATCTTGGGCGTAACAGACACGAAGTGCATCCACGATATATCTAAATT
ACCCCTGGCCTAGAAGCTGTTGTGTACCCTGTGGACTCACACACCGGATAGCCAAATCAT
CAATCTTTTGCACCGACTATGGTTTGTACCCGACATCTTACGATCCATCGATGATGACAT
TCTATACAATATAAGTTCATTGGATCAGACTACTGATCCTGGATTCCTATCAGTCTAGTG
CTAAGCCGTAGGATAGATGTAAGATGGTTGTTGGATTTATTACTAGGTTGTGCATGGTTG
TTTGATTGCTTCCTAATAATTGCGTCTTGTTAGCACACACAGCACCCCTAATTACGTGGG
ATTAACCACCAATATGTACTGTGAGTGCTTGGTTTCAGGAAACTACTAACAGATTTGTAG
GAATCAAATATTTTAATTAATTTGACTAAGATTTGCTTTAGATGCAAGTAATATCTTCGT
CGCAGAAAAGAAGATGCAAATAACATCTTCTTCCTCCTTCGTATGTAATATCGCCCAACA
GTTTGCTTCCTTTAGAATAAAATTGTGTTTATTTTCATTGAAGAATTTGCTTCAATGGTA
AATGGAAAATATGCTTTGATTTAATATAAAATTATGTCCGCATGAAGAGATATTCTGTAT
CAAATGCATTGCTATCTTGTTTCCATCGACTAGAGAATTGCTTCCAACCAAATGTCAAAT
TTCTTCCATCAAAGATAAAAAATACATGTTTTCAAACATCGCTATCTTGTTTCCATCGAT
TAGAGAATTGCTTCCATCAAATAGTAATTTACTCCCAAAGAGAAAAGTATTTCCACTATC
ATTATTACAAATCCTGAAAACAAAATTGCGATTTGTTTGAAAATTAAAAAATACTGCTTA
TCGAATGGAGTATGATTTCTGGACATAGTAAGTTAACTCGTTTCCATGCGTCAAACGTCT
GCTTTGAAACAAATGTTGGTAATTGCCTCCTACTTGTTTCTGTACACATTGCATGAGGAA
ACCATCAAATTGACTTCGACGAAGCTCCTCCAGGCATCGAGCAGATCACACGGCCATGAC
TGTCCAAGCCCCTTGGGGCTGTACAAGGGCCAAATTCTCGAGCATGATGTCACCCACGAT
CAACGATGTTGGTTTCCCAGGTGACTTTTGTGTCCCGAAACTACACACTGAATCGATCTT
CCACAAAACGACTCTTCAAAATACACTCGTTTTTTCTCTTCATGATTTCTAGATGTGTAA
TGAAAATCAAAAATTGGATGTACATTAGCAAATGTGAACATATGTCACTTACAACCATAA
CTAGACAAATAATATATGAAAGAAGAAAGAAAAATGCAGCATGAGTCTCATGGCTTGACA
ACAAAAAAACTGGTAAAAATACTTGACTCTACTCCTTCAAATTAAGATCATAAGGGGGTG
ATAGGAATTTTGTCTAGTCTATATGACAATTTTAGGAATCATGGGATTTTTCGGAATCAA
GTGCAAACACAAAGCCTACAAAAAATGAGGCATGGAAATGAAGCAAATTGAAAGTATTGT
AGAAGCACAAGCTAAAAATGCATGAAGCAAATGATACACCGACAAGGTGAAGCTTCATAA
CCATGATATGTAATTATGAATAAATTGTATGCACTTACAAAGCACAAGTATGATGTGTAT
GAAGCATGGAGATTTGGTAGCATTTTATCCATGCAAATCTTGACAAATACTGCATAGTGG
AAGAAAAAATCACTACCTCTGTAAACTAATATAAAATATTTAGATCAAGATCATTTAGAT
TACTATTTTAGTGACCTTAACGATCTTATATTAGTTTACACAGGGAGTAGATGGGAAACA
TAGAAATTTGAGTATTGAAAAGAGTGCTTTCTGAAAATGAATCATCTTAATCGAAAGCAT
ACAAATTTGGAAATGTAATTAGCACCAAATTCACCAAAATTCATCGATAATTCAATGACT
TTGTATATACCAAATTGAGATCAAAAAATGAATCAGCCAGGGGAGATGGGACCAGTTGAG
GACCGATTTTGTACATATTAGCGATGGCCGTCATCATTGGATGAAGGGACATTTGTGGTA
GCCACCCGCAACATCAAGTCGTCGTTAGTGTGTCGCTGTTGAGGTGCCGAGTAGATGAAT
AAGTCGACGACAACGCTGCAGGGAAATGGGATGGAGGAGCAAAATCACACCCAGATCAAA
AGTAATGCAAATCAAAACAATTGATTTAAAATGGATCAAAGATGAGATGAATCAAACTGT
AGTTTCTTCACCGCGATGGGGGTTACACGGTCTGGTGAGATCAGGGAAGGATGGTGCGGT
CATAGGAGGGACGCCACACCATCGACGTGGATGAGTTGTAGCCATCGCAGATTTTTGGAT
GTGGAGGTAGCCGTCACGGCGAGCTCGGGGATGAGTTTGTTCGAACCATGCATGTGGGGC
GATATTTACTCATGCTGGCCGTGGTGAGTTGGTTGGGACGTGGGAGGAGGCGAGATCAAC
TCGGGATGGATAGTAATAAAGAGATTAATTGATGTATTTAAGATTTGCTTCTAAATATGG
GCCATTGGATTATGAAAGAATCAACGACACATGACCAGTCTGAAGAAAGTTACCTATCAG
ACTTTAGATAGGAAGTGTTTCCCTTTGGTAATGCCAAATGCACCGAGCCAAAATATACTT
ATCAAACTTAGGAAAGAACATCTACCCGCAAGACCGACTTACCCATGAATTATGCTAGCG
GCAAGCCTATCGTTGATTACCTCGCGACATCGCTTCATAAGTTTAGTTAAACATGTGATA
CAATGTTGGGGGGAGGGCAAATGACCCCCCCCCCCCAAACATCTTGGTTTTACATTGTAG
CTTCATACATCTTGCTTTAACAATTTAATTTCCAAAACAACGAAATGAAGCTTAGTGTAT
GAAGCTCACTAGAAAGGGAGAAGACATCCTACTTTGGATACACATATCCGAGTGTCCCAC
GAGGTCCCCTTGACACTTGAGTTGTCATGTTGTTGTAAATCGATATGTTACTAGTGTTCA
GATCTCGATGAACAATGTATAGGGTGCATCTTGTATGGATATACTCTACCTATGAAATTC
AAAGCGTACAAGGAAAAGAAACAATTTTGTAAGGCCTTTGATTACATTTAGTAGAATAAT
TGGATGAACAAAATGAGAGGGAGATTACCAGAGGCGGAATTAGCATGGGGTTACGCCTAG
GGCTAAATTACCTTGAGTGGTGTACTTTAGAATTTTTTTGTACTTCATAAGAAGATATTA
TAAAGAATATTGTCACTACACCTAGGGCTATAGCTCCATTTTCCCTAGGCTTGATTCCGC
CACTGGAGATTACCTCTTGCAGCATCTACTTCTATTTGGAGACACTGGGCTCAATTGATT
ATTTGCAAAAGCAACACCTCATCCCGTGAACAACACCTAGGTTTTCTAAGTACACTTACA
ATATTATTTTGGAGTAATTAATGTAATTGTTCATTTCCTAAAAAATAAAAATAAAAAAAT
AGCGCATGATCCCAAGGTTTAAAACATAATAAACATTAACCTAGAGATAATTAACAATCT
AGCATTAGTTGTGCAGTATCGGAAATGTCATGTATAGAGGTCTTGTCTAACAGTGCAGAT
CATCGTTGTAACTGATCACAAAACATATCTTGATATATCATATTCAAAAAAATCTGATAT
ATCATTCAAATAATCCATTCTTGTACAAAACTAACCCCAACCTACCTAAGATGCATCATC
CCTACAGCTCTAGATACCCTAAAGCACAACTGCACAAATAATTAGTTTATAAAGAAGGCA
CACAAAGTAAATGTGAATTAATGTGTCAAAGATTTTAGTATGACATATGCACACACTCTT
TCATCGTCTTAGATAGACTAGATGATTGCCTGTGTGTTGCAACAGGTATAAATATTTTAG
TATGATAGCCCGTGATTATACTTTCATATTAACACACAAAGTAAATGTGAATTAATGTGC
CAAGATTTTAGTATGACATATGCACACACTCTTTCATCGTCTTAGATAGACTAGATGATT
GTGTGTGTGTTGCAACAGGTATAAATATTTTAGTATGATAGCCCGTGATTATACTCCCAT
ATTAACACACAAAGTAAATGTGAATTAATGTGTCAAAGATTTTAGTATGACATATGCACA
CACTCTTTCATCGTCTTAGATAGACTAGATGATTGCGTGTGTGTTGCAACAGGTATAAAT
ATTTTAGTATGATAGCCCGTGATTATACTCCCATATTAATATGATTGTATATATAAATGT
ATACCAAACTCTGCTTGTGATTTACTCTTCCGATTCTATTTTCTCTGCCCATAAGCAGCC
ACACGAATACCAAGTGAGGTTATCATGACTCTGTTTTTAACATTTTTACCTATGTGCATG
CATGAAGATAGATGAATTGTTTTAATTGCTGCATGCTGCCATTGGGTCTCCTCTTCCCTT
TCCCACGCATGTAGGGATGGACCCCTTTGCATGACGTGTTTGATTGGCTTGGTCTTTCAA
AACGCATGCTAATTAATACAGCTAAAGCGGGGTAGTACAAATGAAAACTGATCTAAAGAA
GGATAACATGCAGACTAATTAGGAACAAAAGAAAAATGTTATGCGCAAGGAAAAAAGAAA
CGGAGGGATTACCTATGTAAATACTTTTCTTTTTTTGGTAAATTTCTATTTGAGAAGCAC
CTACGGGCCTACTAAATAAACCATAATTTTATCTGATAAATCAACAAGTTGCTTGACATT
TCATGCGATGAAAAAACCCCACATATATGAAGGAAAAGAAAATCAAAACAGAGAAATAGA
GGGAAAAAATATGCAAGGTCAAACGAAGGATGAGATAGACCACATAACCTTACATTCATT
TTAAGTAGGAGATACATGTTCAAAAATGTCAAATGGAGACCGAACCCCATGAAGACTTAA
TTTGAAAATTTCCGAATTCTAACTTTTTAGTATATTTTTTTTTCTAAAAAATACACATAT
ATTGAGAGATATAATGTATATATGTGTGTAAATTATCAGGTTGAAATACGTTAAAATGTG
AGCTAGTACATAATAAAGTTAAATTTTGTTCTTTTAGCATACGTACTATTTACCCTCAAA
ATCCATGGTTTTTTTGTGAAGCTCAGAATTCAAGGCACTTTTTTTTTTCCAGATTTGTTT
GAAATAATTTCTTTTTGAAATTTGATTTGATTTTTTTTTCAAAATTAAGGCATTCATGAA
GTTCGGTCTCCAAAATGCAAATATGTTCCCTTGCTTTAGTCTACAAAGTCCACAAGTTTC
ATCATCTCAAAGGCTTGAGCTATTATTGGTTCCAAATTCAAAATAAAGAACCGTCGTGCC
TATTTCTCGGTTGCGGTTGCTTAATCATTCCGAAGCCCACAAAAGTTTTTCTTTAACGAA
TACGTGGGATGTATATCTTTCCATTGATAAAGGGAGGTGAAATTACAAGGTTACATCCAT
CATTATAGCGCATACTAGGAGGCGCTTATGATGGTGCCGTTGAGCATCAAGAGAAGGGGT
TGCTCAGCCAGCAAAAAGTTTAGTAGACCCTAATACTACTATCTTAAGCAAGTCGCAACC
ATGTTCTCATTCATCATCATCATTTCGTTTAAGAGTATTTATTATTAGTGCGTACTGTAT
ACTAAAGCATTCAACATCCACCTTGGTCAAGCAACCTAGAATTTCCCCTACATCCGCAAG
TTGCACCATGATGTCATTAATCATTTTCAGGGAGACGCCCGCATCTTTTGGGTTGGAGCG
ACCGACCCCGATGGAGTGACTTGTGATCGGAAGCAAGTCACGCAGGAGGGAGGCGGTTTC
GCAGCAAAAGCAGCGAGGCTTTCGTTTCCTCGGTTGGACCAAACCCAAACCCAAACCCGA
CCCAGCCGGAAAGGCCAGCCAAACCCTCGCCAGTCCCCATTCCCCATTCCCCTCCGAGCT
CGCCCGCCCGCCCGCCATGGCGCCGGTGGATCCGCACTCCTACACCGACGGCGCGCACCC
GGTGACCGCCCACGCCGCGCTCGTCTTCTACCTCGACTTCGCCGCCTCTACCATCCACGC
CTCCGCGCTCGTCACCCTCTCCGCGCCGCACACCGGGGACCT
