| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_40641
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_56231 |
2 |
1251 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_56231
Contig Sequence (8126 bp)
>contig_40641 8126 assembly3_WGSMorex_rbca.fasta
CACGCACAGGAAGGAGGCAGCGGCGGCCGAGCAGCAGATTGAGCCCAGCGGCCAGATCGG
AAGCACAGCCGGACAATAGGCCCATGGATCTGAGTGGAGCAGCCCGTGAACCAGCAGATT
GGCCGATGCAGAGGCCAGGCCGGCGGCTGATTGGAATCGGGCAAACATCATGAGCAGCTG
GAGAAGAGCAGCCAAGGCGTGACCAGAAGAAGAGATAAGCTAGCAGATAGGCTAGCAGCA
GCCAGGCGTGAGGAGATCACGGCAGCGAGGAGATTGGATGAGAGAAAAATACGAGATTGA
TACGTAACCAATCTGTACAAGCACGAGTTGCGGCGTGCGAGAAAAATAAATAACCTATGC
TCTGATACCATGTTATGAAAGCAACTTATGTCTATTGAAGGCCCAAGGGAAATGTATATA
TTACACATGACTTGAAGTGCAAGGAAAGTAAAACATAGACTAATAAGGACTCCTAAACTA
ACAATAATACTTCCTAACACTGAATAGTTTGCGAGGTGAGAACCGACTTCACAAGTGTGT
CGTGGCTCCCTTGGTCATGTGTAAGCCCTCCCAAGGCACAACTATCGGCGCAATTTTGTC
CTTGAGGTGTTGAAAGTCGATGCGTCTGAGCTGCTAAACAAGATTGGGAGGCCGAGGTAT
CTCATGGGGAAAGGAATTATGTTGTCTTACCCGAAACAAATTGGGCACTCAAGTTTGAAC
AGTACCTAGTATATTCGTGTCAATTTTTGTTCTTTCAGAGTTTTGTAATAAATAGCTGTT
GCATCAAAACTGAGCTCAAATTAATTTCTATTGCAGGTTCCTGCATCAGTTCGAGTTAAG
AGAGAATCAGCTCTCCCTAAACCAAAACCAAAGGCGCAGCAGCAGCAGCAGTCATCAGCA
CCATCATATTCTGCTCTGACGCCTTCAGTAACCCCCATAAAATCTGCAGCCCAGCCTTCA
CCCTCAGCTTCTAAGCCACAAAGCATTGATGACTCCTACATGGCATTCCTGGAGGATATG
AAGCAACTGGGTGCCCTCCATGAGTAGGTCGGCATCCAGTCTCTTCTCCCTAAAGGCTGT
CAGCAGCTTGGTCATGAACCTGAACCTGAACATGATTACGTTCTTTGCATTGTGGCTCAC
GAATCACTTTCCCTGCTATGATCTTAGAAACCGTTTCTGTTTTTCCATGAGCAAGCATTT
CAGATGTATTCCAGTTTGTAATGGGGAAATAACCATCATCAACAAATCTTTTCATTGTAG
TTGTGCAACACAGCTGTATCGAGTCAAACAATGGAAGCACTTAATTGACCGCTCTAGGCA
GTAGAGCAACAATATCTATACACTTGTCTATAAAGATTCTGTGGACACATGCTCAGATAA
CTCTGGTCGTGGGGAACACTACAGAATAGAGACACACCTGAATGTCGCGAATTCTATGCA
TGTCCAGGGAAAGTAAGGCTGCTCACTCAACCCTAGTGGGCCAAACTGAATGTGGACATG
GTAAAAACAACTCCCTATATACCTAAATACTTGTAGTTGTAAAGAACTAATCTAGTTCTC
CCCAACTACAAGTATTTAGGTACAGAGAAAGTAATATCGATGGAGCCTCAGGATGAGGTG
GTGTGGCTCTACACGCTGAAGCTATTGCCCTTTTGAAGGCCATCAACGTTACTAAAGATG
ATCATATGGGCCAACGTATCTGGCTATCAGATCTCCCTCCCAATGTAACAGTCGCAGTGA
CAGCCAATTTGGTCGGTCTGACGTAAATTTGGAATGCAAGGTGTTTCAGTTAAAAAAAAG
AACACTAATGGCAGCTTGCTGTATTCGGATTGGCTGAATTAGAAAAGCACTCAAGCCTAT
GAAATCAGATATATTCTGTACCATAGTTATGAAAAATGAGTTTCAGTTGTTTGTCAGCTC
GTACAACATCATGCGTGCCTTACATACAAGAAAGAAAGAAAGAAAATTGTCGTGCCACGT
GCATGTTATAATTTTTTGAAAAGGGAAAAGATTCGCTGCAATCATCAATTAATAGAGGGT
TTCGAATGAGTAGGGCATTTTGGAGGATGAGCTCTATGGAGCACTTCTTTTGAAAAAAAT
GAAAATCATATTTTAAGTTTCAAAAAGTTCTGAAAGAAAGCACACACATTCATATTGACG
TGTTCTACATGTGTATATGGTCTGACGATGAAATAGATTATGGTGAGAGCTACACAAATA
AAACAATTTCGTACATTTTTTAATGAATCATGCATGTACCATTCACCATTTCATAATCAT
GATTTTCTCTTTTTTGTATAGGTCTCACCAGAATGTATATCTTCTTCAAATTTTATATAC
ATGTACTATATATTCGTATGAACTCATAAGCATGTGATATTTTTTAGATTTTTTGATACT
TCAAAATAAGATTTTTAAAACTCTTAAAGGGATCCATGGAGCTTGTCGTTGATATAATCC
TGACAATACCAGGGGATATGAATGTAGAGGCAATCGTATCTAACGAACGATGCGGTTGGG
AGTAGGCTCAAGGAATTACACATGTTCGGGCCCTCTGTGGTGGAGGTAATGCCCTACTCA
TGTGGCGCTCTTTACTCTTGGCATAGGATACAATGTGAGACCGTTCAACCTCTTGCACAC
GGCTTCCCTCGTGACTTATATAGAGTGCACTAGGTAGGGGTACATAAGGGGCAAGTATCA
ATGCTTTTCACGGCCTTGGTGCGTCCGACTGTTTCATAGCATTTACTACTAGTAACAACC
ATATTTAACTACATTATACATCCGTTGGATAACTGTCGCCATTATGGCATCATGGCCAAG
AGGCAACCTAGGTAGCCGCAGACTGATGGTAGCCGACTGTACTCCTTGTCTTCGGCAGAG
TGCTGGCGGTCGACAATCGCCTGGTATACGACTGTTAGGACTTAGTGCGGTCCCATGCCA
CCCTCCTTGTCTCCGTTGGGCCGCTAGTGAGCCCCCCGTCCATAGTCTGATGGTTCGTGT
CCTGTACGTGCTACTGTCATTGATGGGCTACTCGTATACTTGGGCTCCCGTATTTGTAAA
CCCGATAGTAGCCTCCGAGCCAGTTGAGGTCTCGCTCGAGAATTACGGAGTGCTTTCTTC
TAGCAAGATGTTTGATTTATCGACGAGCTTGAGGTGCAACTGAGGGATCTCGACAGACGT
CTGTTCATGCCCTCGACCGGCGTTGTAGCGAGCAACTAGGTAGAAGACTTGGTGATACTC
CTATTCGCTGCATTCTGCGACAAATAGAAGACCTGTCGCATATGGCATGGTAGACTGGCT
TGAAGAAAGTTGTCGGTCGAAAAATGAGAAAAATAGCAACAACCGACCTCGGATTCGAAC
TCAGCCGAAATACAAGTGCATGTACCTGGCTAACCAATCCACCTATGAAGCATCGTTTGC
ATAAGACGTAAAGAAAATTCTAAAGAACTAAATTTAACCGAGAAAAGTGAACATTACTAC
AAAAATTGCAAATAGTGTTTCAAATTTCGAACACTTTATTGAATTTATGAACAATTTTTA
ACAAACGCAAACAAATTACAAATTCATGACAAAATTATCAAATTGTGAACATTTTTTGAA
TAGTGAACAAATTTTGAAACCGCAAACACTTCTCAAATTGTGAACAAATTTTAAAACATG
AACAAATTCCAAATTCATGAACAAAATTATAAAAGTATGAACATTTTTTTTCAATTGTGA
ACAAATTTTCAAAGAATAGGAACATATTTTGAAATACCCCGACCAAATTAGAAAATGCGA
ACACATTTTTAAAGCACGAACATTTTTTGAATTTTGAGATTTTTTTTGAAACTGAGAACA
ATTTTTTTAAAAAGCGAACAAATTTGGAAGTGCAAACAATTTCTTAAAGCACGATCATTT
TTTGAATCTTGAGAACAAAATTGTGAAAAAGGAGAATAATTTTGAAAAACCCCGAACAAT
TTTTTAAAGCACGGACATTTTTTGCATTTTAAGAACAAATTTGGAAACCAAGAAATTTTT
GAAAAAATCGTGAACAAATTTGGAATCGCGAACAATTTTCTAAAGCATGAATTTTTTTTG
AATCTTGAGAACAAAATTTTAAAAAGGAGAACAATTTTGAAAAAAACCGAACAAATTTTT
AAAGCACAAACATTTTTTGACTTTCGAGAACAAATTTTGAAACCAAGAACATTTTTTAGA
AAACATGAAATTTTTTAGAAGCGCGAACAATTTTTAAAGCATGAACATTTTTTGAACTTT
GAAAAACCCCGAACAAATTTGAAAGTCCAAATAAATTTTTAAAGCACAAACATTTTTTGA
ATTTGGAGAACAAATTTGGAAACCGAGAACATTTTTAAAAAGACTTGAAATTTTTTGGAA
TCACGAAAATCTTTTTAAAGAACGAATATTTTTTGAATTTTGAAACCGAGATTTTTTGAA
AAGTGTGAACAAATTTGGAAGCACTAACAATTTTCTAAAGCACGATCATTTTTTGAATCT
TGAGAACAATATTTTGAAAAGGAGAACAATTTTGGAAAACCGCGAATAAATTTGAAAGCG
CAAACAAATTTTAAAGCAGGAACATTTTTTGAATCTTGAGAACAAAATTTGAAACCGAGG
ACAATTTTGATAAATCCTCAACAAATTTGGTAGCGTGAATAATTTTTTAAAGCAGGAACA
TTTTTAAATCTTGAGAACAAAATTTGATAAATCCTGAACAAATTTGATAGCATGAACAAG
TTTTTGAAAGCATGAACATTTTTTGAATTTTGAGAACAAAATTTTAAAAAGGAGAACAAT
TTAAAAAAACACGAACAAATTTGAAAGCGCGAACAAAATTTTGAAGCAGGAACATTATTT
GAATCTTGAGAACAAAATTTGAAATCGAGAACAATTTTGATAAATCCTGAAGAAATTTGG
TAGCGTGAACAATTTTTTAAAGACGGAACATTATTTGAATCTTGAGAACAAAATTTGAAA
CCGAGAACAATTTTGATAAATCCTGAACAAATTTGTTAGCGTGAACAATTTTTGAAAGCA
CAAACATTTTTTGAATCTTGAGAGTTTTTTTTGAAAAAGTGAACAATTTTGAGAATTGCT
GAACAAATTTGAAAACGCGAACAATTACTTAAAGCACAATTTTTTTTGAATATTGGAAGA
TTTATTTTGTAATGGAGAACAATTTTCAAAATACCCGAATTCTTTTGGAAGCGTGAACAA
TTTTTTAAACCACGAACGTTTTCCGAATTTCAGGAACAATTTTCAATCATGAACTTACTT
TAAAAAATAACCATATAAAAAAGAAAAAGAAAAGAAACCTGAACAGAAAAAAGAAAAAAG
AGAAAAAAGAAGCAAAACTGAAACTACGTGTAGAGGGAGATGGGCCGACCCAGTTGGTCG
GGCGCTTGTGCGTTTGGCCGACTATTTGACGCAAAGAGTGTCAAATAGTGTTTTCCGTCT
TTTTCAATCTCTTCTCGAGAGGATGGCTCGTGGTCCGATTGTAGGCGTATCATCAAATTC
CGAGTGGTTGTTCGTGGTGCGTGGGCTTGATTGGATCAAGGGTCACTAGTCAATATCCTT
CGAGAGGAACGCCCGTCGCAAGATCTTCTGCGGAACCAAGTCCACGCACCCGAATATTCG
TCTCCCTCGAAGGGGAATCCAACTCGAGCCACAAGGGATATCTCGGGAGCCGCTTGGTCT
TACACATAGTGGATCTGCTACGAGTAACAATTCACTCGTTTTTCTTTGAGTGACGGGCAA
TCGAGTAATTACCACACCTTAGGCATGGGTTTTCTTGTCCTGGGGCAACCCCCCTTCCCA
CTTTGATTTGTATTTCTCATCCAATTGGAACATGAATCGTGAGCCGACCGAAAGTTAAAT
CGTCAGCAGATCAGAAGGCAGTTCGCCAATCGACCGGAAGGTTGATCGTCAGCTGACTTG
AAGTCTGGACGTTAGCAATTATCATTGTAGATCTTCGTGAGTCATCACATCGATATCTTT
TCCATGTCACGCAAGCTCCCGCCTGACCACTCGCGTGAGTGGGCTCTTCGGGTCACGTGC
ATCGTGTGTCTAAAATCCAAGTGACGATTCCGGGCATAGTGGGTTATAAATGCCTGCCCG
TCTGGATTTCCGCGCTGAATTGACACCACAACCTCTGCTTCTATTGCATGTCATGCGGGA
TTCTTATGAGGCTAGTCGTAAGGCTGCCCGTAATGGGGGAGTATCATAGGTAGTATCATG
CATGCCAACTAGGCAATTTCGATGATGTAACATAAAATTAAATGAAGAAAGAGAGGGTTG
AGTATCATATTAAATGATGTGCTATTATGTGTCTTGCATGACAATAAATGAACTACTCTA
TGATACTAACATATNNNNNNATGCATTACGGATGTGGTATCATATAATAGTATCAACCAA
CCTAATGGTTGTATTATAGGTACTATCATGCATGCCAACTAGGTAATTTTCATGAGGTGT
CATAGAATTAAATGAAGAAAGGAAGTGTTAAGTATCATATTAAATGTTGTGCTACTATGT
GTCATGCATGATAATAAATAACATATCCTATGATACTGACATATGATACTATGCATTACA
GATGTAGTATCATAAACTAGTATCATATGCATCATATTAGTATATGATACTCCCCGTTAC
AACCAGCCTGAAGATCCTACGTGGACTCCGATATGAATACTCCACCATTTGTGAGGGGAT
TGCGCATGTCCCCACACCTTCCGCAACCACCGGTGTAGTTCATCTTACTCACCCCAACCT
CCAGATCACCATGTCTTCGAGTTAAAAACTTGAGAAGCCAAGGCGGCCGGTGGTGCGTTT
TCCTCTATGGCTGGAGAGCTTTACATGGACACCACTATGGCGACCACTGCTGATGACTAG
GAGCGCGCGGACTGGCCCCCGTCCATCATCACAGAGGGTGTCCTCCATGCTTACACATGG
GATCATCGGTTGCCGGAGACCGGCTAGCGGGTGCTATACGGGCGTGGGCGAGAGCCCCCT
AGGGTGCGGGCGGGGTGCTCCTGACATCTTACCTGGACCGAGGATTGAGCCTACTCATCC
ATCCTTTTCTCTACGAGGTGTCGTGCTTCTTGCAGCTCCACCACCTCGTGCCGAACACCA
TTGCTCACCTCTCCGGCTTCGTGAAACTGTGTGAGGCTTTCCTCGGCATTCTTACTGACT
AGGCCTCGTTAAAGCACTTTAAAAGTGCTAGTTATTGACTAGAGGGAAGGGATTATTATG
GAATAGGCGATTTTTATGAAAAGCTTTCAAACAATAAATGTCTTAGAAGTATGCAAAAGC
GAATCAGGATCAGGTAGGGATTATAATCAAGGATCCATGCTAATCATGCAACATAATGAT
GACAAACAGGTAATAAAGGCATAATCATCATGCAACTATAGATGTATCAAACATAAACTT
AGACAACACGAAGAAAAATGACAATTAGATGAATGTCTTCACACAAGACAAGCAAGCAAT
GACTTCACTCACAATACAAAACAATATGTAAAGGAGAGTAAAGATAGAACCAAAAGCTCG
ACGAAGACAATGGATTAGTTGGACTAGTTCGAGTTGGTGTGACAACTTTACATATGGTTG
GGGAGGCTGAGCTTGAACTCTGAAGGCCTAGTATTCACCTTATTCTCCTTGAGCCAAGGT
CACTTGGACCTCGCCCAATCACTCTGGTAAGTCTTCAAGGTAGATTTCCAAAATCTTCAC
AAACGTGGTCACCCGACAATCCACAATGGCTCTTGGATGCTTTAGATCCCGACGGCTAAC
CGTATGGAAGATCACAATCTTCAAATGTAACAACTCTTTGGTTCTCTCAGAACAGAATGA
CTTTGGTGATGCTCTAACACTCTGACTCTAGGTTTTTGGATTTATCCTCCAAGATCTCTC
TCTCTCTCTCTCAATGTCTTTGAGACGAGTTGCTCCAAAATGATAGAAGCCGTATAATAA
CTCTAATCAGCCACCAATTTTGGTGGAGGGGGTGATATAGGCAAAGGTGTCCCGATCTTT
CGATGAGATGATAACTATCGATTTTGTGGAGACGAATTTGACAATCCGACTACAAACGTG
CACGACGTTGTGCCTTAGCAATCGCT
