Contig Data
morexGenes
Links



Map Locations of contig_40625 (4335 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_40625

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56194 1 1001 bp AK364063 Available Available None





CDS Structure of MLOC_56194






Contig Sequence (4335 bp)

>contig_40625 4335 assembly3_WGSMorex_rbca.fasta
TAGTATTTTTGTTAAATGTTTAACAGGTAAAATAACATCATATTTAAATTCTAAATATTT
TTCTAATCAAATTCCATATATAATATGTTAAATTTGAAGNNNNNGTTTAGAAGATATGAG
TATTTTTTAAAATATTTAATACATACTACGTGTTTAATATTAAAAACATCAGGGAGTTTT
CTATAAAATATCATGACGGATTAAGAATACTAATTTCTTTTATTAGTAGGTATAGATTAC
TTTAAGTTCTAACTTTACTCTAGGTCAAATGTTATGGAAATCAATTTTAATCTATAGAAA
ATACGGTTATACCTGTAAAATAAAATGTTAGTAGGACAACAAAAGCTGGAATAGCTCAGT
TGGCCAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCCTCCTTCTAGCGGA
TTTTCATTTTGAATTTTTTCTTCTACCGTATTTTTAATTTGGATTACATTTACGTTCTTC
TCTCAGCACGTTCTTGCTAGGACGAAATGCTTAGCCGAAATGTCTAACAACACGCCCATC
TGAGCTTCTTAGGATCTAAGGATTGGCGTTGACAATGGCGTAGCCTTTTGCAAACCAAGT
AAACTACGGTTGATTATCTTCTACCACTAGCATATGCATAGCCAGTGCATAAACTACTCA
AAACACTAGCCAAAGCCCGTGGAGTGCGGTGTCTCCATGCCTATCCGGTCCCTAGCAAGT
AAACAACCTGCAAAACCACTCCAGCCTCTGTAGGGCTACCAAAGCTAGCGGCACTCGCAT
TCAGCGGCAGCCCAATTCCACAAAATCAACATGCTTTGTGCTGTACTCGAGCCGTTATTT
TACTCCGTGCGAGCATCCGATGCAGTCGTGCGCAGGCCGGGTCCAACTTCCAAGCCAAGT
GCATCCATCCCATCCCATGCAGAAGCAGATGAAGATGGCGCGTCCGGGAGCTACAGGACA
GGGGAGACACGCGCGAGACACGGCGCAGCGCGGGCAGCCGGTTTAAATGTGGCCATTCAG
ACGTCCTACGAGGTGACAGCCTGGGCGCCCAATCCCTGTCCTTGCATTAAGGCTGGACGT
TGTATTCGTGTCGTATGCGCGGCCGGACGTGGTACGTACGCGTAGTACTGGAGTACATAA
CTATGGGCATCGTCATACGCGTCATTACTCCGTATTCACTGGCCTGTTCCTGACCGGCCG
GTGTAATTTCAAACCAACCACCGGTGATGATCAAGTAAGTAACTGCTCGTCGGGTACGGA
CGATCAGCCACGGCCACAGTCACATCACCCGTGTTTTTTTACCGGCGTAAGTAAGTAAGT
AAGTATAGTACTTTGCACAGTAAGACGGTGCCGTTTCCAGGGTGAGCTATGGATATTTGT
ACTCCGGGAGTAATGACCGGTACTGTACTACTGTGCGCTAGCTTAACGCGCTGCTAGACT
GTTCCTGGCTGTAAAACGGCAGCAGGCCATCACTGCGCATGGTTAGGTGCTCCTAACACT
CTCAAAACTGCAGGAGATTATATCGAGATCATGGCCACTTAAATGCCGGAGAAAGTTGGA
ATATCTCGTAGGAGTACGTGTGTAACCGTTACGGGGAGACGTCCACCCGATCTTTTTCTC
CTCCTTTTGGAACGACGCGGCGCCGACTGAGATCGGGCAGAAACAAGCGAAACGCCATGA
TCGGCGATACGGTGGTACGGTGGCGTTATCACCAGAGCCACCCGAAGCGCCGGACACCAT
TGAGCTGGCCTGTGGCTGGCGGCTGGCCACCGTGCGAGGAAACGGGAAGGCGCCGCGCGC
GCTGCCGGTGGCCGGCGTGGCAACGAGGCCTTGCAGAGCTACAATCGCCGGTCGCTCATG
ATGATGGCTGGCAGACACGCTTGATGCCAAGGCGTCGGCTAGCTCCAGCTCCAGCTGGCC
CCGAATCATTCGCTCGAAAGGAACCCGAGAACCGCTGCTGACGACGCAGTCCTCATCAGC
CACGTACACGTACGTATACGCCAAAACGCGATATTTGTCGATCGGAGCTCACTCGGCCGG
ACCCATCCGACGGCCGGTGGGCGCCCACGAGGCCCTTCTGACAGACAGGGAGGCCAGAAC
CTCCACGTAAGCGCGCAGGCGTGCACGGCTGGCGCCTGGCGGGCGGCCGTCCGGCAGCGG
CTGCTGGTGCTCGACGAGCAATGAGCGGGCGGATTCACCCACTCACGGGCGCGTCGTGAG
GCGTGGTACAGTACGTGGGGCCAGCACGGCCCGTGCAGCGGCCCGGCCGGCGACGCGCAT
AGCCGCTTCACCACCAGCTGGCGGCTAGCCGTGCGCAGATCTCCAGGCGACGCCGGGACA
CGTCGGATCGGATGAGGACGGGATGGCGCCCCTGTCGCGCATTAAAACGCGCGGGTCACG
CCCTACGGTGATGGGCCGGCCTGTGGGTCCTGCACTTTCGCTCGCCTCGGCTCTGCACGG
GATGGGATGGGCCTGCAGGACTGGGGCGGCCTTAACTCGGCCGTCAGCTTTACAGGATCA
TCATCTCCTCTAAAGCCACCATTTGCTGTCATCTAGGGCCTGAAACCTAAAGACACGTTT
CTAATTATTAATTTTTTAAATGAAGACACGTACGGTGGGAGATTCAGCTTTAAAAAAACG
TACGGTAGGCGATGACGCAGCAGATGCTCTTAAGTGCTGCGAGATCGCATCGCCGATCAG
CAGATGGCGAGGCGAGCTGCTCCGCCCGATCCACCATTTCCGTGTAGATGGTCATGGGTT
AAACATAACGGTCTCGTCTTCCTTCTTTTGCCACCCCCGTTCCAGCAAGCGCCAGCCCAA
CGCTGTACCGTACTCTGACAACAGTACTGAAAGAACGCCACTGTTCGCTATACACCCGGT
CCATGGAGAAGCCAGTGACCCCCGCAACGCAAGTACCAAAAAAGCTCAAACGGCCCGGCC
CGGCCCGGCCCGGCCTTCCCCCAACGTTCGTATTCCTTCCCGTTGCCGTGCTGCCCAGCC
GAGAGAGCGAAGCAGCTTTCAAACGCCTCGAGAAGCCAACCCTGCTTTCACCCACTCCCG
CAGTCCCCACTTTACCCTATCCGGCCGCGATCACCAAACTGCCCCCGCGGCATCCCGCCC
ACGCAACGGTCCCCGAGGGACAAAGCGACGGGGCAAAAGGGTAATTCGGTCCCTCCGCTA
CAGCTGGGGTTGAGCAGGAGCACGCAAAAGGCCAGCTGTCAGTGACCGTTCGGGCAGCGG
CGCGCGGCCAAGGACGCCCCCGTCTTTACTTTGTCCGCAGAAAGAAAGAACGAAAGCAGC
GGCACCCCTCATTCATACGTCACGCGGTGCCATGCCCACCACCTTTGCGGTGCTCCGGCT
CTCCCTCTATAAAACCCCGGCTCGATCCCCACACCAGTCCATCACCGGCTCACGAGCTAG
AGCAGAGCATCCTAGACAAGAAGAGGAGAGGCACCACCACCCCGGCGGACGGCAGCAATG
GCGGCTTCGTTCAGCTCTTCTGTGGCGGTGGCGGTGGCGGTCATGGTGTGCGCAATGCTG
GTGCAGACCTGCGTCGCCACGAGGCGGCTCACGGCGCTGGTGCAGGACCCGCCCATCACC
ATGAAGTACCACAAGGGCGCGCTCCTCTCCGGCCGCATCGCCGTCAACCTCGTCTGGTAC
GGCAACTTCTCCGCGCCGCAGCGCGCCATCGTCACCGACTTCGTCTCCTCGCTCTCCTCC
GCGTCGCCGGCCGCGGCCCCGCAGCCGGAGCCGTCCGTGGCCACCTGGTTCAAGACGGCG
CAGAAGTACTACGCCAGCTCCAAGGCCCGCTTCCCGGCCCTGGCCCTCGGCTCCCACGTC
CTCGACCAGTCCTACTCCCTCGGCAAGCGCCTCCGGGAGCGGGACCTCGTCAGGCTCGCC
GCCCGCGGCGGGGCCAGCCGCGCCATCAACGTGGTGCTCACGGCCGACGACGTGGCCGTC
GACGGGTTCTGCACGAGCCGCTGCGGCTCGCACGGTGCCTCCCCGCGGTCCCGTGCCGGC
CGGTTCGCGTACGTGTGGGTCGGCAACCCGGCGTCGCAGTGCGCCGGGCACTGCGCGTGG
CCGTTCCACCAGCCGCAGTACGGGCCGCAGACGGCGCCCCTCGCGCCGCCCAATGGCGAC
GTCGGCGTCGACGGCATGGTGGTGTCGCTTGCGTCCATGATCGTCGGCACCGTCACCAAC
CCCTTCGGCAACGGCTTCTTCCAGGGCCCCGCCGAGGCGCCGCCGGGGGCCGCCCCGGCA
GGCGCCCGCGGGGGCCGCCAGGGGGGGGGCCCCCGCCCGCCCCGCCCGCCGGCGCGCGGC
CCCGCGCCCGCGCCG