| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_40574
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_56129 |
6 |
1761 bp |
MLOC_56129.2 |
Available |
Available |
LOC_Os03g07790.1, FRAME:-1, EVALUE:2e-137, 13103.m00875 protein zinc finger, C3HC4 type domain containing protein, expressed |
| MLOC_56128 |
2 |
1248 bp |
MLOC_56128.1 |
Available |
Available |
LOC_Os03g18454.2, FRAME:-3, EVALUE:4e-105, 13103.m02212 protein gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed |
CDS Structure of MLOC_56129
CDS Structure of MLOC_56128
Contig Sequence (8826 bp)
>contig_40574 8826 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTGTTATAATGTGTCACAAACTTGCCTAGCTTGCCTAGAATGAG
TAAAATCGAGAATTTTCACTAACTGGGGTGATATCTGTCACAAACATGTATTTTTGGGGT
AAAAGACGGAATTCACTCTTTTATTCAGATAGTGGTACCTGTGTGGAGTCAAGGTCAATG
TTCTCTTGTTTGGAAGAAACAAAATAGAGAAACTTCTATGTAAAGACAACATGAATCTCT
TGATGCTAAGCTGGATGGCCTAGATAGAAGGTGTGGCTACCTGGTAGGATAGAAAGTTCA
CACTTACTTAGGTTCGGTAGTTCAACAAACCAGAAACCAGATAGGGCTAGCAGGATCACC
ATAGATCACATTATTATGCACATTGCATATCTCCATATTAACTTGAACACCGCCTAAAAG
AATAACTTCAACAGAAAAATAGAACTGACAATGCTCACGTATATCTCCATATTAACTTGA
ACAGAAATTTACATCACCATAACTCACTTTAGTACCGATGTGCATCTCCATAATTAACCT
GAACAGAAAGATGAAACTGTCCTATGTTCACATATATCGGTATAGGAGCTCCGAAAGGAG
ACATACAATTTATCAATTGCCATCAGCCGACACCATCTTAATCTTGTCATCGAGCTCGAA
ATCGCCAGAGTTGTAGGTGACACCGTTGCCTACCTCCACCACCTGTTGTACGATTGGGTA
GTCACGGCCCAGCCCTTGGCAAATCTTGGGAGGATGGCCCTTGTACGCCTTGCAGACGTA
AGCTTCAAAGTTCTCGTAATCCTGAAACAAACAAGCTCATCATGACTCAAAAACTACCGT
ATGCTCATATGGTGAGATTCAAACATGAAGCTGAGAAAACAGTTAGTAAAATGTGAAATC
GGCTATCATGATTGGATCAAAAACTTGAGAAGAGTAGTCGTTACTAACCTCGTAGAGCGG
CTCGCCATCAACCACCACCCATGGAACGTACTTGTGCGGAGGCACAAGTGCATCAGTCTG
TTTCCCATACTTGAGCGAAAGCTAGATGGAGCAAGCCAAAATACAAACGCTGTGGTTAGC
ACTTTACCTAGTATAAAATGTATGTGAATGATACAGCGCAGAGGCAAAGGGAACGGACCT
TGTGGCCATGCTCACTGTTGTAGCACTCCATGACAGGCTTGGGGTCAAGCCCCTGTTTCT
GGAAGCACGACTGCCATTCCTCGCGCTTGCGGTTCATCACCAGGTCTTCCACGCAGTTGA
TGAAACCGAAATGCACATTCTGCAACCAATGACAAGTAGCTATCATATCAAAGAGGATGT
GTAACAAAATTCTCCAGACTTGGAGCAGAACTGTCTAAATTCTGTAGCGAGAACTCGGAC
CTGGGGAACCAACGACAACTACCTAATGACTATTCTATACTACTATAACTGATACAAAGT
TCACGTTGTGATTATTGTATCATAGTACAGCCTATTCTTTCCTGAGAACTTAATGTGGTT
GCAACAATACGTTGGAGGTGAAGCTGTGAGCAGAGGTTATGATGAGATGTGGACGACTTA
CCAAATCCGGCCAGGCCTCGATGGCGCAAGCCTCCACATTGTTCAGAAGGCATTCATCGG
GGCCATGCTGCAACAAGCCAAAATCCCAATATTAGTATGAGCATCAGCACCACCCACCGC
CAAATAGTCAGTAATTAACAGTGCTAATTAGAAAGTATGGAGTACTACTCAGAACTAAGC
ACACACCCCAGGATCCCCGACTGAAAAAGAGACATCTAATAAGATAACCAAAGGAAGAAG
CAGGGGAAGGGATCGGGTGCGCGGCGATGGCACACCTGACAGGTGATGGCACCATGCGCG
TCGACCTTGGCGTTGCCGTAGGGAACCAGGGTGAGGTCTGCGGCGTCAAGGAGTCCGTCC
TTGAAGACTCTGGCGAGGCTGTTCACCACGAACTGCTCTGAGAAGGGGCACAGCGACTCA
TAATAGAGCGCCATGTTCACCTTCCTGCTCGCCGCCGTGACAACATCGCCATTGGCGCTC
GCGGAGGAGGCACTGAGCAGCAGGAGTAGCACAGGGAGGAGGAGGAAACGATGGGGGCGG
GCGGCCATGGGGTTTCCTCCTCCGGTCGATCAAGGGGCAGAGGGTGCAGAGAAGAAGGTG
GAACCTTGGAGTGAGTGCAGGAGGTTGGCAACGAGGGGTTTATATTGGCGATTAGGGTGA
GGCGCGGGTAACCACGTGTGCAGCGAGGTGATTTAAAGGCCAAACCAGAATGACTCCATG
CTTAACTCAGCTACATGGGTGTGCCGGTGTGGTGCATATTTGAGGTGTGAATTGATCTTA
TGAGCACCTGCACGATAAAATGATGATGCGAATAAGTAGAAAGGTGCCCTTAGTTTCCAG
ATGCTGGTGAACACTAAGACTGCTGCACAATCAAATGAAGCTTGTTTCTTCTGGAAGAGT
TTCCACTCTAGACAAGAAGAACTCAGTGCGATACAGGTCGTTCAGAACTAGATCACGTAA
ACCAGAAGTTAAGCAACTTGTTGAGGATTGTTAGTGGCGTTTCTAAAAAAGCTAGCAAAT
ACAAAACCTCAAAGCAATTGGCTTGCAAGGAATTAGTAACCCTTCCATAAGCTGAAAACT
AGAACAAGAGAACTCTACGGTAGAATGGTTGGTAGTGGAGGTCTGCCCAAAAACCAGGCC
ATTAATCACCCGTAGAAATATAGCAGTACATGATTATGATTATTGGTGGCGGTTGCAAAC
CATGTTCTCCTCCTCTTTTTAGAAACACAAACCGTGCGCACTACGTAGTGGGTCAGTACG
AGATTAGTACGTAGTTCAGAGCCGAGAGAGAACTCGTTTTAGCTCTGGCGTGAGTGAGGC
AAGGCAGGCAAGTTACAAATGTAGTTATTTCTTCGTACAAGGCAGAAACAAATACAAAGA
GGGCAAACGGGCCGCGCTAAATGGAACATTCTGGGCCGCGCGCGTCCACCTTGGTTTCTC
TAACCAGCCAAAAAAAATAATGGCAGGATGGCGACTGATTAGCAGCAATACACACCTTGG
CCGCTCTGATGACACGCTGCTGCTGCCACTACCGTTCAATTACTGCTTGGTTTGACAAAC
CGCTACGCTAATTAAAGAAGCTAGATTTGCGCTTGGATCAATTACCAAGTCAAGAGAAGA
GGAGATTCGTGGCAGAGCAAAATTCAGTGCTAGTAGAGTACTACTGTACTGTACTAGCTA
GGAGAATTGAGGATTGAATCGCTGGAGTGGGTGACGGCGGCACCTGGCAGGTGATGGTGT
TGTTGGCGCCGCGGACGTGGGCGTTGCCGTAGGGGACGAGCAGGAGGTCGACGGCGTGGA
TGAGCCCGCTGTCGAAGATCCCGGCGAGGCGGGTGACGATGAAGCGCGAGCAGTAGGGGC
AGAGCGACTCGTAGTAGAGCGCCAGGGAGACCTTGGGCGGCCCCGCGGCAGCGGCCGGCG
GCAGGAGGGCGCCGATGACGGCCGGTAGGAGCAGGACGAGGCGGAGGCGGAGGGCGCGAC
GGGAACCGGCCATGGCGCGCAGGGGATCGCGTCCTGCGAGAGGACTTCTCCTCTCCTGGT
CAACCGGAGAGCGGCGAGTTTGTGTCGATGTCGATGGGCATAGACGGGATCACGGGAACA
TACATACAGTACGACAGTAGTACGTAGGAGCAGTGGTGTGTGGTGCCGGCATATGCACGT
CCATCTCGGGGCGAGGCTACACGATATTTCTCATGTGTTTGGGACGTGTCACGATTCCGT
CATCAATCCGCCGTTTGTGTAGCTGGATTCCTGGGTCATCAAGCCCTTGTTGATAATGTA
ACAATTGTAGAGGTTAATTTTCCTTGTCTATAAAAGGTTGTAGTGCCTCAACTCAACAGG
TCCAGAGCAGAGAAGTTGTCACGAAAGTACATCAGTTTATCCAACTGCGGATAAAACAAG
GAGCTACACACAAAACCGACAAAGCCTCCCCCAAAAAATTGTATTAGGTCCATAGCTGAG
AACGGTCACAGGTACAAGTGGATACAGGAGTTCATCCATCCAACTACAGACAAAAACAGG
AGCCACAAACACAAAATCCCAAGAGAAAAGAAAAAGGAGCAACACAAAACTGGCTGAGCC
TAGCTTCCCCCAAAAGAAGCTCAGAGTTTCAGTCACAAACACATGACGTGTAACAAATGA
ATCGTTTCTCTGTCCACAAAAATCTTAATCGAATACAATTAACAGAAGAATACAATTAAC
AGAAACCAGCGCATGCCTCCTTGCAGTGAACAAAACACCTCGCAAGCATGCATGCGCCAT
CGGAGCGTCTACCACGTGGTCATAGTTCACGGTCAAACTCTACAGCCTACGGCAAACCTC
TCGGAAGCGGTTCCAGCTTCCAGCTACATCTGCTTATAACCTATATTTAGTGATATTATG
GTCCTAATATACAAGTCTAAAGGGGTCGGGCACAAAGCAAGCTGCCCTCAAGCAGAGATC
ATGCATCATCCGGTCGCGGGCGCAACAACTTCGTGATTGCCACACAACTCATTGCCTCTT
GGGCTCCTCGCCGGGAACTTCAGCAAAGCAGACAGGACATACCTGCACAGCAAATGCATA
CCTCCTGTCAGCTAAAGAAGCAGCGGGTAGAAACGAGAAGCCATACGGATTGTTCCGTTG
TTTCCTTATCGCTGACCTTGTTGATGGTAAGCCATTTTGTCACGCAGCTGGCATGGTACA
CATGCTTGCAGGGGAGTGCCATCTGCAGATCCCCTCTCCTATACTCCATTTGGCAGACGA
CACACCTGTTTGTTGCCCATAGGAAGGTTCTTAAAAGTTATCTTCCTTTCCATTTAAGAA
TCAGGTTGATGTAACTGCGTCCTCTACAGGTAAGCAGAAACAGAATATTGCACTCAAGAT
GCAGCATCGTGTCGATGCACACAGAACTAATATGGCATGCTTCGAAAGTTTACAAGGTAA
ACCTGCCTAACCGGAAACTAAAAGCTATCAACAAAACAAACAAAGCAAAAACTGAGGCAA
AACCCTAAACCTACAGCATAAAGTAGGACAAAGTCATAGTGCAGAACTGATGGTGTGAGG
GTTCGCAGCAAGATCTAACCTTTCACGGCGTTTTTTCTTCCTTGAAAAAAAACCACACTT
GAATTTGGTGACTGGAAGTGCTGAAATGCTTTCTTGGGAGAGACCCCGACTTTGGGTTCC
AACTGCCTCGCCCAAATCCAGCAATTCCTGTCAACAGAACTTATCAGCGAACCAAGTTCC
AGAATTAATAAGATGAAAAAAAAGATAGCAACGAAACGAATTATTAATGGACATACAGAT
TAACCATTGAAGTGTATTGTACTATTGTTAGTTGAATAGTTCCGGTAGATGAAACAAAAG
AAAACCAGTGTGATGTGTGGATGTATATATCTACTGATGACTTTAGAAGCATGTACTTTC
AGATAAGCACAGCAAAAATACTGCTGCGTGATTATTCAAGTAACAAAAGTTTTCTTCATC
TTAAGTCACATCATCCTTAAGGTCCAGAATTTTGATCCTCAAAGCACCCAAATAGGAACA
ATAAATTGATCAATCCAATTGTGCATGGTGTAATCACTGCACACGTCTACATATCTAGCT
GAACCCAAAGATATAAATCAGATGCAGAAGATGACACATATATTAAGTGGGTTTTACATG
AAACAGCGAGCATGAGAGCATGGTGACACAAGTCATGCAAGAGAAGTCATTAACCTCATA
TGTCATGTTGTCAGGATCAATGCTGTCTTGCCAAACAACCTGGAAATAAAACAGTATTGT
ATTTCAGTGGACCAATGAAAAAGTACCTTTTGGGTAGATGAGAAATAAAGTGTACACATG
ATACATGGAAATAAATAAACAATGCTATCACATAATTCTGGTGGGATATGGGGGGATACA
TGTCATGTAGCCTACTACCACATCGCAAGACAATTAAATAAACTTAAGCATGCTCCAAAA
ACTCATTTACCTGCGGACTGCTTGAATTTTGGTGCACTGGTTGTTGGATGCCTGCAAGTG
AAAACTAAATCAGAGTGCCAAACTAAGCCATGTATCAGTGAAGCAACTGTTTGGATAGCA
GGTAAAGGTTCAAATTTTATAAATTGTCAGTTACTGTTCATGTGGTGCCTTAATGCATAA
GAATCCCTTGAGAACATCACATGTGCAGATCCGGTGCCCCAGTTTATGCACAGTTGGTAT
TCCAAAATAGGCATTAATCAGATAACTATGTACTTCCTCCGTCCCAAAATTCTTGTCTTA
GATTTGTCTAGTTATAAATGTATCTAGTCACATTTCAATATTTAGATACATCCATTTCTT
GACAAACCGAAGACAAGAATTTTGGGACGGAGGGAGTAACAAGTAAAACAGCAAGAAATA
CTATCAGTATCATGACCAAGTCTAGAAAGTATGCAGTAATCCATAAATGCATAACGAAAT
AACCACACGATTATAACGACACACTGGTATTCTAAACCCACTTCCGAACTTCATTTTTCT
GTCCTCCTGTAAGCATCTGATCAACTGTGCTCCATTTGGTCAACATTAGCAACGAATTCA
ATCATACAATGCCGATCACTAATAGTCTGACGCTAAACAAACTTCCCATGTTATATGACT
AACAGTAAGCAAATTTATGTGCTTTGTAGTCCTCTTAGAAAGGAAAAGCAAAAAACGTGG
AAGAAAAATAGCCAGTAAAGTGTGTTACTGCAGGTATAGCATAAGTGGCTGATGAAACCA
GCATGTAACCATGTCCAACGATACACTAATTGCAGGTATAGCATATTACTGACTTGAATA
ATATTGTAATTGATCCTTAGTACCTAACCAGAGATGTTTATGTAGCTGTTATTCCAGAAC
AATAATGACCTTGACTCCAATATCCTATAATAGTGATTATTTCAACTGCCAAAAACCATA
TCTCTTAAGTACTGAACTTACGATCCTCGGTAGTAGCACTTGCACTTGCATGAGGAGCTT
CACCACCCTGTAGGACTACGTTGGGGGAGTCGGTATTGTTTACAGGCATGGGGTTATCCC
AAACTCTACGTCCACTATCTGCTCTATGCATGTAGTCATTCATGTCATACACATGTCCAT
AGCTGTAGTAATTTCCTGCACCAGAATATCCGTATTTATACGAGTTTGTCTGCATCATCG
TCCAGTATGGATTAGCCTGCACATTAACAACAAATAAGCATGGAACGCAAAAGAAAATGA
TAACAATGGATGAAACAGTGACTAAAGTCATGATTGACGCTATTATATTCTTTGAATGAT
GTGCAAGTGAGCTTTCAGAAATCATCATATTCTCTCATAGTGGATTGTTGAGTGACTCCA
TTTCCTCTTTATTTTTCTTAAAATGAAGCTGATGTTAGACTTGTGAGAAAAATAGCTAGA
TTCGTGAGGCTTGTAAACTACTAAAAATTGAAATTCGGAATCACCAAATTCATAAGTACT
CCCTCTTCCCATAATATAAGATGTTATTACAACCAATGTACGAGTATATTGGTCGTAATA
ACATCTTATATTACGGGACGGAAGGAGTATCATAGCTGAATCCTGAATATATAAAGAGTG
GCATTTGCCAAAGCCACAAACCACGTAATATTACATGCTGGATATATGTACATCATTACC
AAAGTACTCCCTCTTCCGGAATTAGTTGACGCTCAGACGGATGTATCTAGACGTATTTCA
GTGCTAGATACATCCATTTGAGCGTCAACTAATTCCTGATGGAAGAAGTAGTAAGCAATC
TAATGGTAGCGTGAAGGATTTGAGGAAATGAAATTGACTAGCTGTTGCACTAAAAGGCAA
TTACAATATTTTGTACCTGATCCTGGAAGGCATCTGCAAGAGCAAAATCAGCATGAGCAT
ATGTGAGGCCTTCAAAAAAATCCATGAAGCTCTCGGTGATAGTGTATGGATATCCAGTGT
TTATGTAGTGGAGTTCCATCTGTCGACTCCCGTTCATCCTTTCCGACGGATCATCAACCT
ATAACAAATCAAGCCAAAAAACTTTCATTAAACTTCACTCATAGAAATGAAAAACAAACT
GAAATGCGCATCAAAGTTAGGACTCAGCGGAATTGAGTTGCTAGCCGAAGATCAAACAGT
AAGGAACAGAAACATCATATGAAGTGTGTAATAGGCATAGTGATCTTTTGACTGAAGCAA
CGCCTGGAGGAGTTGAACAACACTGCAGATCTTGCTCAATCTTAGTTGAAAGCAATAGAT
CAGTCATTATCTCTAGATTGCCCTCGGCAATGGAACTTGCAGGGCTGAAATGTGCATTCA
TGCCGCAGTGGCCTATTTACCATTCTACCGTAAAATGATACTGTATGACAGAAGTGGTCC
TTTTGTCACCAATGGTACAATGCACATTTTTTTCCAAACCACAAAAACTACCAGCACGAT
GCAGGAACCAATGCACGATCCAGAGAGAAACAATGCCAAGAATAGAATCGGGGGAGGCCT
CCACTCGGAGCATCGAAAGCAAAATAAAAACAAGAACTGAGGAGTGGCAAATCGCGGCAT
CGAACCTCCGCCGAGGGGTGGATCTAGACGGCATGCCGGGCGCGTACCGGAAGGCCGAGA
AATTGTGAAGGTCAGTGGGATCTGGATAACAATCTCTGGAAGAAAAGAAGCACATACCTC
AAACTCAATGACCAAAGACCGCGGACGGGGCGGAGGCAGGAGGGACGCGATGTGGCGACG
ATGAAGAAAGGGGACGGCAATGGCAGCGTCCCGCGTGAGAGGCGTTGGGGCTGGAGAGAG
GGGGGG
