Contig Data
morexGenes
Links



Map Locations of contig_40468 (5468 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_40468

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_56002 1 762 bp None Available Available None
MLOC_56001 1 891 bp None Available Available None





CDS Structure of MLOC_56002






CDS Structure of MLOC_56001






Contig Sequence (5468 bp)

>contig_40468 5468 assembly3_WGSMorex_rbca.fasta
GGAGAGGGGAGGGATGAGGAGGAGGCGAGGGGGCGGCGGCGGAGGCCGTGACCGTCACCA
CTGCGGGAGCGGAGGCCCTTCCGGCTTCGTCCATCTTCGGCGAGCGGCTGGGTCGGCCAT
CACGCGATCGCGGCGGCGGCGGCGGCCATTGGGGGAGGGGCTCCGGCGAGTGATCGGTGG
CGGTGTGTGCAGGATACAGAGGGAGAGAGAGAGAGAGAGGAGGCGCCCTGCCTGCCGCTG
CCCCTTGTATTTATTTCTCCCCCTTTCTCTCGCTCTCTTTTTCGGTGCGCGACCTGCTAC
GTGCACTCGCGCGTTGCACGCGCGCTGCCCGCTCATGCGATTATTCCCCCCTTTTTTTTT
CTTTCTACCCGGCGAAATTGCAGCGCTTTCTTTTGTTGTTGTTGTTGTTGTTTTAAAAAT
TATGATCACGGCAAGGGCATGGGAGAAGATAATCAGGGCCATCTTTGCAACTGCGTTTTT
ACTATGTTGTGTTGGTTTTCAATCAGCTTGATGAAAGGATGGAACACTCGTTGATTTTGC
ACATAGGAGAGGAGATGTAGTTTACTCACCGAATTCCTGCCCTGCTGAATCCTCTGATGA
TGGGTCGCCCGTGGGCGACGGGGTATTTGTAACCATGTCCGATGGGAGGAACTTTGGCGA
GGGGTGGCGGACACGGCGCCTCGCTCCGCCGGGTTTTATCCTTTCCATGTCATTTACTCG
TGTAGATATAGATGACGGGGCGCCGGTGGGGGGAAAGGCTATTGTAAATGGCAGCATTCG
AGAAAAGGGGTAGGTAGGGTGAGGGGCAAGCGAACGTTACGCCCGGCGGAGAAACCGAGA
AGGATGTCGACAAAAATGCTGAGCTAGAGATTTGCGTTCGACCGACGGCGTGGGCTGCAA
GGAGATAGAGCACCACGCGCGAATAATATGAGGCGCCGAAAGGGGGGTTCGGGACGCAAG
GCGATAGATGACAGTAAGGCGAAGAGATGAGGCGCCGAAAAGTGCACTTAATGAGATATA
TGTTTTGCTACCATATCTCAACGTTTATGGCGTGTATAGATGGAACTATATCGGTGACTA
TCTTCCATGATCAGAAGTCAAATGCATTGTTTTAGTGAAAGTCCATGATCGACGGCGTGG
GCTGCAAGGAGATAGAGGACCACACGCGAAAAATATGAGGCGCCGAAAGGGGTGCTCGGG
ACGCAAGGCGATAGATGCCGGTAAGGCGAAGAGATGAGGCGCCGAAAAGTGCACTTAATG
AGATATATGTTTCGCTGCCATATCTTAACGTTTACGGCGTGTATAGATGGAATTATATCG
ACCGCTATCTTCCATGATTAGAAGTCAAATGCATTGTTTTAGTGAAAGTCAGACGAGCCA
AAGGATTTAGACTCGAGGCGAACAAAAAAACTACAGATAATCTTTTTACGCTTTGATTTT
TCATAGGGTATGCTTGATCGGGCTGATATTTATCTTTCTTTCTTTCTTTCTTTCTTGCAT
TGCATGTGCCCTATATCTTTTATAATTTCCATGGGGCATTTAAAAAATATTGTTTGTAAA
ATCTCACCGTGAGATCAAAAAGAATCATGACATCTCGACTCTATAATTTTCCATGTGCTT
GCTTGCGGTTTTAGAGCGAAACAACCGTGAGGTACAATAAAAGTGTGTTTGATAAAACTG
ACACGCTATGGATCTCCACCGCATATGTAGTCAGTCCTGATAAATTGATTGTCTATCACC
AATCAAGTTTTGCCCCTGTTCCGACGACGAAGGGATGATGATGACGGTGCGCCTTCCGCT
CGCTTCAGTGCTAGTGGTCATCGTTGGATGAACTACGAATCCGGATGCAATTTTTTTATC
AATTCTCGTGTTAGTTGTACTGCCGGGATTGAAGATGAATAAATTAAAAGTTCTTCTGAA
AAATAAAATAAATTTGATGGTGGATTTCAATTGTTGTATACTAAAATAATACGACCAACG
CTCGTTTTAGAATTACATGCGCTGTCGAAAACAGAGACTCGGTCTAGCCTTGATGTGCAA
ACCAAACGGGGAAAAGAAAGGAGTACGCTTGTGTGTGTTGACGACAAGTGGACAGGAGCG
GAGCATCATCCTGGGCGGGGCCACGGGCGCGGCGGTGCGGTGCGGTGCGCGTAACAATTC
CGCCCGCACTGTGCATGGTGCCAGTGTGCCCGGGGCGTCCGCTTCGGGTGTTTTTCCCCT
CCTCCCATCCCTTCCCTTGCCTCTTTCCCCTGACCCGACGCTCCGCTCCTTTTACGCGTC
CCTCCCTCCCTCCTTCTTTTTGTTCGGGTGTGAATTGTGAGGAGAGGAGCCGCACCGCGG
GAGTGGGGTGACCTCATCCAGTCGTTCCCCCCCGCAATTCTTCCTTTTTTTTCTTTTTCG
TTTTTTCCTCCCCCTTTTTCCCTCGCACAAAATACCGCTTTCTTCCTCGCCCGCCTTTTG
TTTCCCTCGCGTCGCTTTCGGGGTCTCCCCGTTCGATGCGCATCGCTCGCTCGCTCGCTC
GCTTTTATTTTTGGGTTTGGGTTTGGGTTTTGGTTTTCGTTCCGTTCCGTTCCTGTGCTG
CTCACCGACCACCTGTTTTAATCCCGACGATACGGTTCGGGTGGCGCGGCGACCTTGGGA
TTCCGGCCTGGCTGGCCTTGGGGGACGGGGCCTGGATCCATCCTCCTTCTCCGGCTTGGA
GCCGAAGCGAGCCTGAGTGGAGGGACGGGGTGTGGTCTGTGGGTTTCCCGAGGCAGCAGG
CACGGGTGATGCAGCGGCGGTGGGTTGCGTTGTGCGTGCGTGGTGGTCACCACGGACGGG
GGCCTATGCTACGCTACGCCCTAGTTGATGGGATGCCATGCCAATTCTGTATTCCGCGTA
ATGGTGGTGGTGGTGGTGGGCGCGGTCGGCATATGTGGTGCTTCCGGGTGTATCCTGTGT
GTGTACACTCATCCCGCGCCTGTGGTCAGATCTATAGCCGGACTCTTTAAATGATTCTCA
TATGTGTGCGTACGAGTCCGATCAATGATCGAATAGAAGAGAGAAGAAAAAAAGTGATCA
AACCGGACCCCTCATATTGTCTTTATATACCCGGGCTGTTTACGAACCCTCATATCCATT
TCAAATATGGGAAGAATATGAGTGCTCGCGGACGCGCCGGTCAGTCCGTCACATAGGACG
TGACTTCCACTCCGGACCATCTATTTCTTTATTTTATCTATTCTTTTGTTTCTCTCTCTT
CTTCTTCAGCAATCACGTACAACTGACTGGACATACGAGAAAGAAAATGATGAGTGTGAT
TGCGTGGATGAACAAATAGGGGACACGCCCGATCACTGACCGGGCGCGTCCGCAGGCGTT
TGAGACGTCGGATTTGCAAGGTCCGGATGTAGATGCTCTCATATGCTACCAGTGTTCGTT
CCCTCCCTCTGATTCTCCGTTGACAGAAAAAAAAAATTCAATCTCCGGTTGAAGCGATTC
CACCCGGCGTCGTCTATCCTCCTCCTCCGGCTACTCTTGCATCGACATTGATAAACCCCT
GCAAGCGCACAGGCAACCCCTACCTCGTCTTTACTAGCTGTCATATATATATATTTCTAC
ATGATAGTACATGTCTTATTTATCATAAGAATCATAGTACAAGTCATGTATATATCAACC
CGACAAAAGCTGAAAAGATAGCAGAATGCTAGTCTTTGCACAAAAGAGCTTCAACCAAGA
AGGAAACATACAATCAAAATCAAAGAATTCTCTAAACTTGATACCAATGTCCACCACCTA
CATTTGGTGTAACCACATCAGCCACCAAAGAAACAAATACGAATCACCTCCTCACCCGAG
CTCAACACGTCTCCATCGCTGATATGCAGCTTTGCAACCTCCAAGGTGGCTCACCAAAGG
TGAAACCATTACCGTTAAATGAATAAGACTGGAGCAACATCCCGGACACGTCAACTCCAG
ATCTGCCCCCCCCCCCGACTAACACGTCGGAGGAGGAAGCCATACCTACCATCCATGAAC
AATGAACCCAGCACGCGATCCACCATCTTCCAGACGTCGTCGATGTAGACGACAATATGC
ATTCGCTCTTGGGCTACCTCTCAAGCTCTGCGCTTGCAGTGGAGCAAACAATGTCGCGAC
GATGAAGTCTGAGGACACATGTCCATCATGAGGATGTCGTCGCCGCCACGCCATCCTTGC
TTGAATAGATTGGTTTCCAAATCCACCCCAACCATAGGACCAGTCGCCTCGTGTGAGAAG
GATGTGAAGAATATTTATTTAGCGCCTTCAACACCGCAACCGAAGCCAAGACGATGAACA
AACTAAAAAAACCTAGACTATGAGGGCCCAATAACAATCCACACGCATGGATCCGACGGC
CCCCTCACCACAGACGACCGGGGTCGTCGACGGAGGGAGCCGCCAGAGGACGTCGCTAGA
TGTTTGGCCTCTCATGGTGGTGGCTAGGGTTCCAGACGCCAAGAACGAGAGGAAAAGTAT
TTAGGCAACTGAGACAAGATTTATTACATAGTTCAACGACCTTTTATCCGGTGAGGTGGG
ATTGTGTGCACTAATTAAGTTGTTGTATTTGTTTGATTTTTTGGAAAGATGTCATATTTA
TTAACATGTTTGTATGACAATAGGCTTAGTTTGGTTCTACCTTGACTAAGCACATTCCAC
TATCTTGTTTGATCCCTAATATCAACTTATCTAACCTCTTTCTTACATGTATAAGAGAAC
ACCGATCATGCTTATTGATGGCACAAAGCTTACCAAGTTGCTACAAGTTTAAAACCAATT
GGTCATTATAGGAGGATATTGCAGTAACATTAAATCTGAGCTTGCTTACCAAGGAGACAT
TGATACAAACTGGATTCTCGAAAAGTGCCAAATAAAAATAGGACAAAAAATACAACATAG
TTACTCTTTGATCATGGGCATATCACTCTTCCAAAAAAATAACTTAAAGTAGAACATAAG
CATAGTTAGGGTAAGATCAATATGGTCATGGGAATCCAAAAGCAAGAGGAGTAGAAAACA
ATTATGCCACACCACCAACACCACCTCACTTAGCAGTATGTCAAATCGAACAACAAAGAT
ATTTATAAAAATAAATTCATGTCCTTTGCTAATAAAGGGCCATGTTCCCACATCTCAAAA
CAAGTATATCATGCACAAAATTTAAGCCTCGGTTCATATGACACTCCATGCTTAGCAGAG
GGAAGTTACTGTCATGGTGTTTTCATGGCAGATGCCATGGGATGTCTAATCGAGTGTGGT
TGGGTCCAAAGGACATCGATGGGTTCTAGATCTTGTAACCAATCTCCGTCTCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCTAGTTGG
ATTACTTGTTGTAAGAGTTTATGTTCAGATCCTTGATGCTACTCATTACATATCTGATCA
TGATTATG