Contig Data
morexGenes
Links



Map Locations of contig_40451 (5293 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_40451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55984 1 1167 bp AK376706 Available Available None





CDS Structure of MLOC_55984






Contig Sequence (5293 bp)

>contig_40451 5293 assembly3_WGSMorex_rbca.fasta
GGGCAGGGGGTGAAGGGGCTGGGGCGGCCGGTGGAGGCGGCCAGGGGCGCCGCCGCGCGG
TACCGGGAGGCTGTCGGGCTGCAGGTGGAGGCCTTCTGGCGGCGCAACTACCTGCTGCTC
GTCGGCGCCGGCGGCGTCATCATCTGCATCGCGCTCTGGCGGGTCATGTTCGGCATCGCC
AGCACCTTCGTCGGCCTCTCCGAGGGCATGGCCAAGTACGGCTTCCTCGCCCTCGCCACC
GCCATGGTCGCCTTCGCTGTGAGTTGCTCCCCTTCTATGTCTCAGTAGCTACAGTATAAG
ATACTGCATGAATGGTGACGCTATTCCAGTAACGCCACGGGGGTGCTGTGCTCACAATCT
AGCTTGGTGAAGTATTCTGGGCAATCTTCAATATTATTCTAGCTGGTTCATTTTGTAGGG
ATTGCAATGCCACTGTATTTTTTGACCTTTCAAAACTGTGATGTATATGTCATGATTCCA
AAATGACCACACTGTTCCTAAAAGAAACCACACTTCACCCTGATGGGCTGGCATCCCTGC
GTGTGATCCGTGTGATGCTAAAAATGTGGAGACCACACCATATTACCGTGCTATCAGTGC
GTGAAGATATTTTTCCTTTGGGTTTACTATTACATCTTAGCTGCCACCAACCATTTCTTT
GGTTTTGGACTTATACCTTGGCTTGCTTAAGAACCAAATTCACTGTCTATTGTTCATACA
GTAAATGCATTGTCTCATACATTTTGTTCTTAAACATAGAGGATCGATCAGGATTCACCG
AGTGGATGTCCATCGAGAATTGGTACTGGGTTCTTAGATAGTGGTTGATTTCCCTGGACT
CCCAACTACTGCCCTAGTGCCCTCACAGATGATGCTATACCATATAGCGCAATGAACGGA
GTGTACACCTTGTTTCAAAATATCAGTACTGGTTATTTGTGAAGCCAAAGTACTGGATAG
ATATGCTTCTAACAATGTCGCCGGTTCATGTGTCCTCATTTTGGTGCGTATGAGTAATGC
AGTAATTTGGGCTTCTTTGATTCCCATTTCCCATGAATAAAAAATTGCAGCAATAGAGAA
ACGATGGGTTCCGGTGTGACGCCTTCTTGAGTCCTAGAGAAATTGAAATAATGCTTGAGT
GCACCATCGAAATATAGGAGCCATTGCCTCTGTACTTGCACCTTTTATTGCTTAAGTCTA
TTGTTCATAAAGTAAATGCTTTGTCGTTAACTATGGATGATGAATCAGAACCCACCCAGT
GGGATATTCATCTAGAATCAGTATGCACATTGTGCTTTACCATGTAGGGCGGCATACCAA
AGGGACTATGCTGTTTCAAAATATCAGTAGCAGTTAATCACGAAGCCAAAGTACTGATAG
GCATGCTTATAATACCGTCGCTCATTCATGTTTATGTCATTTTTCATGCGCATATGCTAC
AGTGGTTTGTATATCTTTGATTCACAGGATTTTTTTTGTTGCAGGAATAGATTAAGCATA
GGATTACAGTTTCACACCCTCTTGAGTCCTATGGGCTTAAAATGATGTTTGATTGCACCA
TCAGAAACCGTAGTATTCTCAAGAGGTCTTAATCAGTGTAAATTTTGCTATGTAATAGAG
TGCAGGTGAGATCATAGAACAGTCGTATGGATCTAACCCTACAAATCAAACAACCCACTT
AGGGAAGTTCTTTAGGATTACATCCTTCAAATGTTATGAAAATCCCTTGAACCATAGAGA
TCCTCAACTTTTGGGTGCTCATGGCGTGGGCCATATTAATTTTATGGTGTGAAAGGTCTT
TTGTTTGTTGAGATGCAGGACTGAGTATACAAATATAAGGGACATGTGAACTTTCAAACC
GGCTAATTATCAATAAGTAGTCTACTTGCAGCACAATATAGCTCATCATAAATTTTGGGT
GGCACATTTTTTTTATCCTCTGCTGTATTATCATGTTGATTACTCATAATAGGTTGTAGT
TGATATCTAGGCTTTTTAGTGCAATTTTGCTTGCCAGATGATGCCATGTTTTGGGGAAAT
TAAATGATTTCTATTGTCCATGTTTGTCATAGGGTATGTATGCACGTGCAAGGTTCACCA
TAAATCCTGACAAGGTTTACAGGACTGCAATGACAAAACTCAATACATCTGCTGCAATCC
TTGAAGTCATGGGTGCACCCTTAGCTGGCACTGACGTCAGAGCATATGTTATGTCTGGTG
GAGGCCCTAAACTAAAGGACTTCAAATTCAGGGTTGGTGGCAAACGGTGCTTTCTTATCT
TCCCCATCAAAGGATCAGAAAGGAAGGGTCTTGTAAGTGTTGAAGTCAAGAAGAAAAAGG
GACAGGTATTTAAAATCTTCTTATTACTTTGTAGCAAACTCTACTTCAGTACCTCTAGAT
TGAACACTCTGGTACTTGTGCATGTAGTACCATATAATTAAGTACCAGACCTTTGTTGTG
TGAATGAAAACTTGAAAAATTGATTGCGAAGGTAAAGTTAAGTGAAACAAATTTCCGTCA
AATTGTTGGTTTCTCTTCAAATTCAATGCAAAATCTATGCTCATGTCAGTTTTTTTGGCA
GCCCTTTTGTAGAAATGAACGAACTTTATCATAGAAATTGATATTTCTGCCATACAACAT
CATGGTCGACTGGTTGTTTGTATTCATTTAGTTTGTTTTGGTGTTTCCCCATCCCTTGCC
ATCCAGAAATCACTGATTTTAGCATTACATTTATGAAGAGGGCTAAGATAAGACTGCATC
CTGCTTGAGAAAGTAGTAGATGGGTGGTATTTTTATCCTAATGACAGCAAGTTTTCTGAC
CTTGCTCTAATTCGTTTGCAGTATGACATGAAGCTACTCGCTGTTGACATACCAATGGCG
ACAGGTCCTGATCAGCGGTTATTCCTTGTCGGCGACGAGCAGGAGTACAAGGTGGGTGGG
GGCTTGATATCCGAGCTGCGGGACCCTATAGTGAAGGCCATGGCTGCAGAAAAGGAGTTT
GATTATCTTGATGAGAGAGAGGACGCAGAGGATGAGCGCAGGGAGCGAGAGGAGGCCGAG
GAAGAGGCGGCCGAAGCGTTAAGGCGAGAGGAGGAGAGGTTGCGCGAGGAGGCTAAAGAG
AGACAGCGGCGAGAGGCTGAGAATCTGGAGAAAGCCAGCTGACCGGATTGACTGCATCCC
TTTTTTTCTCCTTGGTGTTGTGCATTTTCCCACTCTACCCCCCTCACTTCTACAATGCGC
AGCGATCAGCATTTTCGCGGCGACGGAAAGATTGCATCTGAGTTTCAGATAGGCGGTTTC
GCCTTTCACAGCGTGTCGATAGGGTAATAATTTTTGGCTGCTCCTCAAAATGGTTTTTAC
TCGGGAGCGCATTGTGTAATTTAGTGGCTGCATGAGTGAATGATGGCTATAGCCTCGAAT
CCCTTTTTGGTGCCTACTGTACGCGCTCGGTGCTTTGAGCTAGTATGATGTATGTTCTTG
CCACATTTTTGCACCCATTGGTTATTTGTCTTGATAGGTCCCGCTGGTGCAGCAGCGGTT
CCATCTTATGCTCAGGGTAGTTTTCTAAAAGAAGGAGCTACTGATGTGGTTTAGTAATAA
TGAATGAGGTAACACGAACTGATAAAACTGATAAATACTTCCAAGTATCTTGTATCAAGG
CCCTTCAGTAAAAGGAAACAATACAAGTCCAAAGGAGTGATCATGGAAACAAAGACTTGC
GTCTTCACTTGTTCGGTATCCTGTGCACTTCCCAGCATTTTAGTTTCTTGAGACACATTT
TCCTAACTGTTTTGTTGAAGCACACCTAGATGTGACCTAAGTTGCACATCCAAGAGCAAC
TCTAACAGCTTTCTTAAAAAACTTCTTTGTCAAAAAAAGAAAAAAATTCACTGGAGGTCC
TTATACTTGTTTTGGTGGTCACTTTAGTCATTGTAGTTACAAATACTTAAAATACAGTCC
TCATACTTGTCCTAGGGGTTCATATACGGTCCATTCTATGGTAGACAAGTTCATATACGG
TCCATTCTATAGTTTTGTCTATGTATCTGCTTAGGTGGCGTTTGACTCGCCTCGCCACAT
GGCGTTTGACCGACAAGTCAGCTCAAGGTCTCGCTTAACCGCTATACGCTGATAAGCCAG
GGGGTTTTCACAAAATTACCAGCATTTACACACAACACCCCCGCCTCGTCGGACCGCAGC
CACCACCTTGTCGTTTCTCCTCTCCCCTCTCGCTCAACGCCGCTGTCGCATCCACTGCCG
CGGTCACATCCAGTACCGCCCCCGCAGCCACTGGAACCGCCGCATCCACTGCCGTCGTAG
ATCTCGCCGTCACATCCATCCCATGTCCTCTGTTGCCGCCGCGCAAGGGTCATCGTCGTC
ATGTCATCTTCAAGCTCCGTCCGCCACCGATCCCCTTCCTCCTCCACCACCACCAGCGCC
ACCGTCAAGTGTGCTGAAGGGCGCGAGCGCGGAGAGGGAGCGGACGAAGGAGCACACGAC
AGTGGACGGCTTGAGCGCGGGGAGCACGGAACTGATGTTCTGGCTGATGATGACGAGGTA
CGCCACAGTGCCACCAGTCTGGCAGAGGACGGTGATGGACTGTGTGAAGTGCGTGTCGAC
GGTGAAGTGCCTGTCGACGGTGTCGAAGCATCGATCGCTCAGGTCGTCGTAGGTGTAGTT
GTCGCCATCGCCATGGCGGCTCTGCTCATCTTTGAGCACATCCTCCTCTGTTTCTTGCTC
CCACGGCTTGTCCGTGCAATCCTACTTGAGACCCAACATCAGCTAAAGTCAACTACGAAT
GTGTGACTAAACTTCATCAAACCAATCGACTGAGCAGATTAAGCTGAATATTTTGTCACA
GTATAGATCGACTCAACCTGATTAAATCCTTGGAAATCCAGGTAGTGATACTCAAAGTCA
AACACGGGGAGTGGAGGAGCGTGTACTGACGAGGAGGAGCATCCAGTAGAAGGTAGCAGC
GCTGGCGCCGTGAGCCACCCCACGGTACGGAAGGCGTTGGGTAGGCCGAACACGCCGCTG
CCGATGATGGACACAACGATGTTCCCCAATTGTTGTATCGACGCGGACATTTCTCTTTCT
AACCAGACCAGGTCGCTCTTCTCTCCCTTCGACGATGAGCTTCAAATCACCGCCGCTGAC
CTGGATCAAAGACACCTTTCCTTCTCTCATTCACTCACTCACCAACGCCACCCATGTTGG
TGTTGGAAATATGCCCTANNNNNAATAATAAAGTGGTTATTATTACATTTCCTAATTCAT
GATAATTGTCTAT