| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_40411
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55951 |
3 |
1428 bp |
AK354950 |
Not available |
Available |
None |
CDS Structure of MLOC_55951
Contig Sequence (5404 bp)
>contig_40411 5404 assembly3_WGSMorex_rbca.fasta
GATGATATGTGGGCAGATCAACCCAGATCAACCCATCAACCCACACATCTCTCAAACATG
TTGCAACTGCACATGTACCTCTCATCTTCAAGATCAACTCGCACAACATAAACTTTAGGG
TTGACACCATCATTTGCAACAAGATGAAATATTATGGAATCCCCCTAGACTTGAATTTGC
AGCCCAATGCATGCTGATTTAGCCAAGAGCTTTTGGAACTTGGAAAATCTCTCCCTCGTA
TAGAAATTTGTTGCTTGCTTCTCAATGTTGTAATTGCAAATAAAAAAGCTTCCATCATTA
ACAAAGTTTTCTACATATGTTTCAAATAAATGTTGCAACCAAACTGTACTGCCAAAAACA
TTTAAAATCAATGATGTGAAAATAAGCATGAATTTTTTTCGGACTTACTTCCCCCATAGT
GGTAGCCTCGTCGTTTCATTGATCAAGCCATCATTATCCTCTAGCATTAGCTCTTGGCAA
AGCTCAAATTGCCAAATGAACGTCCAAATTGAGTCTACATGATGGTTCAAGATCTTGAAG
TACGAATTCGGTCCCTCGGACCTGCCGGTTGTTCCTGTAAATGGGAAGAACTTCTGCCTA
AAGTACACGGGGGGCCATGTCTTCCTGGTTTTGCACATGTTTTTTAGATGTTGCTTGTCA
TCCAAACCAAAAAATTGAATCATCTGCTGCCACCTTTGTTAGAACTCCTCAATGGTATCT
AACCATTGATGCAACCATAGAATGCTTTGGCAAAAGGCTCGTCCTTGCCCAGCATCTTCC
CTAGTTTTGTCCTCGCAACCTTAAAGACGTGCCACTTGCACCATTTGTGTGTCGAGTTTG
GGAACACCAAGGAGATGGTTGTAGCCATTGTTTGGTCTTGATCAGTCATGATGTTTAATG
GATGCTCGTTATTCATTGCCAACATCCATTGCTCAAAGACCCATTTGAACGTTTCAATCT
TCTCATCAGGCGGCAAAGCACACCCCAAGCAGACCGTGTGTGTTTGGTTGTTGATCCCAA
CAATTGGCGTGAAAGGGAGGTTGTAGCGATTTGTACAAAATGTGGTGTCAGAAACACGCA
ATCTCTGTACTTCGGGTACAATACCCTTGTTCTCGTGTCAACCCAGAAAAGCGCCCTAAC
AGCTCCATCTTCCTCTAGCTTGGAGAAGAAGAAGTTGGGGTTCTCAACCTGCCTCCTCTT
AAAGTACTTGATTGTCAGCTCCAAGTCATGCTCCGACAGGCCCTTCGTAGCTTAGCTCTT
GCATTCGTCACATCTGACTTAAAATACGACAAACTCCTTGGATCGCAACACCGTGCATCT
CCCAGCAAGCTCATCACATTTGTTGTTTATATGTTGCGGTAGTGGAGTGAAGTGATGTAT
TACATATCGGCTTTCGGGGTCTTTGTGTGAGATCGACAGAATCTCCGATGATTATTTTGC
AACATCCATGGGTGAGTGTGATCAGCTTAAAAAACGGTCAAAACCCAGGTTCCGTCTCGC
AGGCTAATACCCATATGCGCCTTGCAATCGTACGGCTCCAATCTGTTTCTTTGCCTCTTG
TCACTCACATCCATAGAGATGCTAGCTTGTTTTCTTGCTGATTTTTTATTAGCAGCATAG
CTCATGTTAGCATCATCACACTGATTTATTGCAGCACCGTTAGAAATGCTGCCACTCGCA
TTCTTGGATGGATTTTTCCTGGATTGTATGCACTCAGAAACTCTATAGATCAGAATACCC
TTCTTCTCCGAGAGTCTTGTCCTACTGTGTCTCGATGTCACAATTCGAGTACCAAAGCCC
ATCTTCAATGCATATTCATTGTACGCTTGTTGTGCTTCTTCAACATTGTATAAAACCATT
CTAACAAAGGGAACAATTGGTTGCAACGATATATCCTCTTCTGGTTCATCAACAAGTGTC
GTAGCATTTCCATTGGCATCATTACAACCAACTTGCGCGTTGTAATTAGCTGCACCGTTC
ATGATCTGCTGTAAGGTGTCATCACTATTCATTCCCAGAGGATCATTCAGATCAATGGTG
TCATGTTTTTCTTGCTCCGCAGCATTTTGCATGTCATTATCAACAAAAATCGATGGTTCC
ATTGCAACATTCTGCAACAAAATCAGCAACCAAGTCATTTTCAAGTTAATGCTTCGAAAA
CCATGCAAAAAAATGCCAGACATAAATAAAAAAATAATGGATGCAGCATATGAAACACAA
ATCCAAAACAAGTTTTTGTTGCTAGCATCATAGCATAATGTTTTTTACATCCAAAACAAG
CATATCATACCTATTTTTCATGTTATTTCTCCAACAAAACTTGTAAAACAGGGGTTCAAA
CATCTTGAAGCATGGAAGTATGCAACATCTTTTTGTGTTTTCATTCATACTTGAACCAAT
TCCTCCTTATAGCATGAAGGTTTGTAGCATGCAGCAATTATGATGTAGCATGTAGCAATC
AATACGTTGCATGTAGCAAATGTACTTTATGGATGGAACATCATAATAGCAGATAACAGT
AAGAATCATTTTACTAGCATTATTTTCAGTTTCACAGGAAATTCAGAATAATCAACCCAA
GTATATTGAGAACAAATCTTTTGTTTGAAACAAATCAACTAAAAACCAATGGTTACAACA
TTTTTTGTGAGAGAAAGGATCTAGGGTTCATACCAGATCAAACTTCATCACGGCCATGGC
ATGCTGCATCCTGAAAGACCACACCCGAATTGATGTACCGTTGCATCACCTCCACACTAC
AATCAATGTATTGCCGCCTCACCGAGATTCGGCCACCTCCACACTACAATCAATGTATTG
CCGCCTTACCGAGATTCGACCATGAGTGTCAGCAGATCTCATCCCAAAACTCGAGCCCAA
ATCCATAACAGCAAGTAATTGATCTCGGATACAGATCTCATCCCAAAACTCGAGCCCAAT
CCATAACAGCAAGTAGTTGATCTCGGATATATGACATGGTTAAAGCAAATCCTAGGTCAT
CTATCCTATGATAGATGGGGAAGACCTCCTCGAGCTCTTCTTGTCGCCGGCAACCAAAAC
CCGACGGATCCAGACGCCACGGCATCCACGAATCGGGGCGAGCCGATTCGGGACAGGAGG
TCTCTGTTTTTCTGGATGAGGTTGTAACATAGATATTACTAATTTGCTGCAACGGTTTGC
TTCAACCATGTCAGTAAGATCGCACCCACGAATCGGGGCGAGCCGATTCGGGACAGGACA
GGAGGTCTCTGTTTTTCTGGATGAGGTTACAACATAGATATTACTAATTTGCTGCAACGG
TTTGCTTCAACCATGTCAGTAAGATCGCACGCAGATCTGACAAACATGGCTCCCTGCATC
GCCTGAGCGTGACCGGCATCAATCCATCGGCCGCCTGAGCGTGACCGGCATCAGTCCATC
GGCGCAGATCACTGCCCTTTTGTGAAGTAACATTCAGGACAGAAGATACCAAAATCAGTA
CACTTCCTTCCTGTTTCTTCACACAAGCAACCACATACTCAGAAGATACCAAAATCAGTA
CACTTCCTTCATGTTCCTTCATACAAGCAACCACATACTCCGTCTGATTAACTGGAATAC
CTGGGACCAGGACGATAATAAGCTCTTAACCAACCACATCTCTGATGAAAGAGCAAAGGA
ACCATCTGATTGAGAAGCACACGAACAACAACAAGCGACAGATATAAACATATACTCATA
AACCATACTAGCAGTTCGCCTGATAAGGTACCTGCTTACACGAAAGGCAAACACGAGCGG
TAAGTCACCGGAGAGCCAGACTATTATGGTCCTGCTTACTGTCTGCTACCACTACTGCGG
CTGCAGTGCACTGCATTATGCGGCATCACTTCAGTTCGTCTGGTTATTCCCGCATTACAT
TATATACTACTACTTTATCTATATCTAGGTTACTACAAGGCAGCGGCGCTCCAGCAGACG
AGCGCAGGAGGCCATCACCGCTCCTTCTCTATGGACAGAAGATCCATCACCACACACTTC
ATGGAACTTCATGGTTCTTGCTCGACCACTTCTTTAGATCTGTGTCAATCATCAAAACCC
TGAGGGGAATAAGAGTTGAGAATTGTAAAGAAGGATCCTAAATTTAAGATATTCTCACGC
TACACAGGATGAGAAGTGGTGCATACCAGTTCCTTCAGCTCCACAAGGAGCGGATCCCAT
TCATGGAAGCCGCACAGGTCATCCACCGACTTCTGGAGATCATACTCATTCTGCCGAAGC
ACCTCCTTGTTCAGGTCAACCTGCCTGAAGCCCATGTCCACCAGTTCCCTCAGAAGGTTC
TCCTCCATGTCGTTGTTGATGGTTTCATCAGGCAAAGGCATGCTAACAGGAGCAACATGT
GAATTGTCAAGAATAGCTGCAGGTAGAGGTTCTGGCATACTGATGTGTTCCATCAGTGGT
GCGGCTTCAGGTGCAGGCACACCAGCAGGCATCCCTAGAGCTTCAGCAGATGAGGCCTGG
GGATAAGCAACGGGTACTTGAACTGGTTCATCTGCTGCCTGGGAATAAACGACTGGTGCT
TGAACTGGTTCATCTGCTGCCTGGGGATAAGCGATGGGCACTTGAACTGGTTCTGCCTGG
GGATAAGCGATGGGCACTTGAACTGGTTCTGCCTGGGGATAAGCCATGGGTACATGAACT
GGTTCATGTGCTGCCGGTGCAGGGGGCACAACACTTCCAACCGCTTTGGATCCCTTTCGT
CCCAGCGTGGCAATCACATCACACAGAGATACGCCGTCCTCGTCATTGTCAGATGCAGAA
TCTGTGGTCCAGGTTGCAGTGCTGCCTTCTGCAGGCAAGTTCAAGAAGTTCAGAGGGCGG
CGCTGCACCTGCACACGAATTTAACAGGCAAATGATCAGACAAGTAAACAAACCATATGC
CACTGCAGGAAGAGAATCCTATGGTCTAATGAGGCTATACAATGGAAGGCCTCAATGTTG
TGGGGTTGCTGTCTGCAGGCAAGTTCAAGTCTATTGCAGCAGTTTGGTTGTCACCACTGG
CTCTTACAGGCTGTTCCACCTGCACACAATATCAGCATGCGGAAGGTCACGAGGAGAGGA
ACATCAAGGCTGACAAGGAGAGGAGCAAGTGATGGCGGAGTAAAAACCTCGATAAGAACC
CAAACTTGTTGACCAAATTTCTGTAGGTCCGGCGATGTTAGTCTCCAGTACGATATGTAC
CTACCAGGTTTCGCAGGTGAAACAAAGTCAACATAAACATCAATTTCTCCATCTAAGGGG
AAACCAGCCTCTGGAACCTGTGAAGGTCAAACAGAAGTTAGACTTTATAATGGTCTGGGA
TGCACCTACGTAATCTCACATTCACAACATATTAGCAAATAAATTACTCCCTCCGTTCCT
AAAT
