| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_40386
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55912 |
1 |
1168 bp |
MLOC_55912.1 |
Available |
Available |
LOC_Os01g69250.4, FRAME:+3, EVALUE:2e-23, 13101.m07566 protein mitochondrial import receptor subunit TOM20, putative, expressed |
| MLOC_55914 |
3 |
1658 bp |
MLOC_55914.1 |
Available |
Available |
LOC_Os01g69240.1, FRAME:+1, EVALUE:0.0, 13101.m07562 protein CBS domain containing membrane protein, putative, expressed |
| MLOC_55911 |
3 |
3108 bp |
MLOC_55911.1 |
Available |
Available |
LOC_Os01g69230.1, FRAME:+1, EVALUE:0.0, 13101.m07561 protein exo70 exocyst complex subunit domain containing protein, expressed |
| MLOC_55913 |
1 |
1120 bp |
MLOC_55913.1 |
Available |
Available |
None |
CDS Structure of MLOC_55912
CDS Structure of MLOC_55914
CDS Structure of MLOC_55911
CDS Structure of MLOC_55913
Contig Sequence (8430 bp)
>contig_40386 8430 assembly3_WGSMorex_rbca.fasta
CTTCGTATAACGTATGCTATTCGTAGTTATTACTTCCCCCTTCCACACCGCCCTCCTCCG
ATCCAAAATCATCAAGCGGCGCGGGCGCGGGGGGCAGGATGGCGGCGGCGCCGCCCGACG
GGCAGGAGAAGGTGATCGCGGCGGCGCAGCAGATCGTCAAGTCGCTCGCCAACTCCAAGA
ACGCCGCGGACGACATGATCCGCATCCTCTCCGGCTTCGACAACCGCTTCTCCCTCATGT
CCGACCTCTTCCCGGCCGCCGGCGCCCCCGACGCCGCGGCCGGCTCCGAGCTCCCCGAGG
GGGACGAGGAGGAGGTGGAGTACGGGCGGGAGCGGGGCCCCGGCTACGGCGGCGACGACG
ACGACCTGGAGGACGAGAGGGACGCGGCGGTGGAGGACGCGCTGCGGCTCATCGAGCAGT
GGGACTCCCCCGCGGCCGGGGACCGGCTGGTGTTCGAGTCGCCCGAGGACGCCGAGGAGT
ACCTCGCCGCGGCCGCCTGCCTCATGGGCGAGGCCGGCCCGCGCGTCGAGGCCGCGCTGC
AGGTCGCCATGGCGCGCCTCGAGGAGGAGTTCCGCCAGCTGCTCATCCGCGGGACCGCGT
CGCTCGCCGCCGACGACCTGCACGCGTCCCTCCTCCGCCGCCTCTCGCTCACGGTGCCCA
CCTTCCACTCCGCCTCCTCCGTCGACCTGGAGTGCCCCTCCTTCGCCAGCCAGCCCGACG
AGGGGGACGAGGCCGCTTCCGCCGCGGGCAGGTGGAGCTCCGTCTCCGACGGCGAGATCT
CGCCCTACCTCATTTCCCCCGACACCGTCAGCACCCTCAAGGACATCGCGGACGTCATGC
TGCGCGCCGGCTATGGGCCGGAGCTCTGTCAGGTTTACAGCGAGGTGCGCCGGGACACGC
TCATGGAGTGCCTCGCCGTGCTTGGGGTCGACAAGATGAGCCTGGAGGAGGTGCAGCGTG
TGGAGTGGGGCGTCCTAGATGGCAAGATGAAGAAGTGGATCCAGGCTCTCAGGGTCGTCG
TCCAGGGCCTTCTCGCCGAGGAGCGCCGCATTTGTGGCCAGATCCTCGCGGCCGACGCAG
ATGCTGAGGAGGAGTGCTTCACTGAGGCAGCCAAGGGGTGTGTCTTGCAGCTGCTCAACT
TCGGTGATGCCATTGCCATTGGGAAGAGATCGTCCGAGAAGCTGTTCCGCATTCTTGGAA
TGTATGAGGCACTAGCTGAGTTACTGCCAGAGCTCGAGGCCTTGTTCTCAGGTGACGCAA
GGGATTTCATCAAGGAAGAGGGAGAGGGGATACTCGTGAGGCTAGGTGATGCGGTGCGTG
GCACGGTTGCTGAGTTTGCCAATGCGATACGGGGGGAGACTTCCCGCAGATCACTTCCAG
GCGGCGAGATCCACCCGCTTACGCGTTATGTCATGAATTATGTGCGACTGCTTGCAGATT
ACAGCCGCTGGCTGAATCATCTTCTTGATGGTTGCGAGACTGAGCTGGAAAATGGGGGTG
ACAATGCGGATATGACTCCACTCGGACACTGTCTGCTGATACTGATCACACATCTATTGG
ACAAGATTGAGGATAAAGCGAAGCTGTATGATGATGAGGCACTGCAGAACATATTTCTGA
TGAACAATCTGTGGTATGTTGTCCAGAAGATCAAAGATTCAGAGCTTAAGACTTTGCTTG
GGGATAACTGGATCCGTAAGCGCCGCGGTCAGATAAGGAGGTACTCTACAGGGTACCTCC
GATCCTCGTGGACCAGGGTATTAGCTTGCCTGAGGGATGATGGGTTGCCACATGCAACAG
GTTCATCGAGTGCACTCAAGGCTGCACTGAAGGAAAGGTTCAAGAGCTTCAACTTGGCTT
ACGAGGAGTTATACAGGACACAGACAGCATGGAGGGTTGTGGATCCTCAGTTAAGAGAGG
AGTTGAAGATTTCCATCTCAGAGAAGGTCCTTCCAGCATACCGTTCGTTTGTTGGAAGGT
TCCGAGGGCAGCTGGAGGGGGGAAGGAATTTTGCAAAGTATATAAAATACAACCCTGAAG
ATGTGGAGAACCAGGTCTCAGATTTCTTTGAAGGGAAAAAATTGAATGCTTGATCAATCT
GTCTATCTTTGAAGGTGAGTGCTAAGTGCTAAATCCCAGATTGTGCTTTCATAGATAGTT
CTAATCGGTTAATAGAAGTCTGTGCAATCAGAATTTTCCTTTTGCTACTAGTTTAATAGA
AGGCTTTGTTGTTGTTTTACGAGTTTGATAATCAGTTAGATTTGGGATGATATATGCCAA
CTCTCAGGTTGCACTTTCATTGATAGGTCATATCAATTAATAGAAGGCTGTGAAGTCAAG
ATTTTCCTTTTACTAGTTTGGTTGTTAGATTTGCAAGATCTTAATGATACTTTGCACTGC
ACTTGAGTATTTGGGATGATATGTGCTAAAAATTATTCAATAATACAACTATTAAGATAT
TACAGAGATTGCACGCCTATGTTACCTTGCCAATTGTAAAAACACATCACGAATATAACA
TTGTTCTGTTGACTTTTGTATAGCCTACCCCAACTTGTTTGGGANNNNNNGGCTTGGTTG
TTGTTGTTGTTGTCTGTTGACTTTTGTAGTTTATCGAGCAATGTCCATGATAAAATTTTC
AGTAACTTATAGTGTTTGTCTAATAGAGTAACAAAAATCGATTTCTCATCTGATCATGGT
TTGTTATGCTTCTTAGTGTAACTTTTAGTTTTAGGACTGTACTCTTTCCTACATTTCTTA
ATAGTCGAAAAATAAGGGAATACAGCTATTAACTACTGCATATTTGAAACAGTAATGTGG
ATTCCATGTAAGCAACATATATCCTCTGGTTTTCAAATCGCATATTGTTCCTTGTTAAAC
GACTTAAGCATGATAAACAAAATTAATGACCTGATCATTTATCTGTTCAGGAATGTTCAT
ATCAATGGTTGTGGTTATAAATCCCTGGCAAAATTCATTCGGGCAATGTGCTTGAAACTT
GCCCTACCATCATGCTTGTGAGGTTCGAAGATGGAGAAATCAATTTTGACTGGTGGATCA
GAAATATTGTGAATGCAAGGCACCCTGGGTCGAATACTCTGCGTTTCATGTTTGACTCTT
TTTAAGGGGAGTATTGACATTAGCCACATGGGATTCAGGGCACTGCGGTGAGCTGTGTAA
CTGTTACTATTACAGTTTACCCTTCTTTTGTTGATTATTGACTATTGTTGGATGGTCGGT
GGTTGACATCTTATGTACAATTTATACAGCAGTTATGATGTTCACTTTTCCCTTGGTGCA
ATTTTTGTTATCAGCTGTTCGGTTGGTTGCTGACAGAGAGTATAGTAACTTCTTGATGAT
TCAAAAAATAAAATAAAATACAGTAGCTTGTAGGATAACTAAAAAGGCTACTAATTATGG
CATTGAATCCATTTCTGTGAATTCTTCAACCTCTGATTGGTGTAGTAGTTTCACTATGCT
TTCTGCTGTTCTTAATCTTGTCAGTTTGTAGAGTGGGTTTTCGATTTATACAGTTTGCTT
CCATCTATTATCATTGTGCTGTACTGCAAATTGATGATTGTTTTTGCCTTGTCTTATATT
TTGCCTGGTTTGATGTCCGAGGTCTTTTATTTGTGCATCCAGTTGTTTTGTGCATTGTCT
TGTACTGCCTTCCCTGGCAGCTCATAGCCTGGGAGATGGCATTCACAATTTCATATCTTG
TGTCATGTGCAATTGCATGTGATTAGGGACAGGTTTAGAGTCACATTGTACAGACTTTTA
CATCCTTGTCTACTCTGTGCCGATGGCTGATACTCCTGCTGTGTGGATTTACATCACTGT
ATTAAGGAACGAGTGCGTGTGCAGTTTCAGACATGAGCAGATTCCACGCAAGCAAATGCG
CGATTTGTTCAGTCTGCCTCGCATAACAGCAACTGTGTTTCAAGTCCCAAATTCCAGTTG
TTGAACTGACTCTATCAGCTTACAAGATGAAGATAACCACATTGTTCCTCATTATGATGA
GCTAGCTAGCTATGCAGAACTGACAACGAAAACAAATGAAGCTAAGCTCGAGTTTTTAAC
GAAGCACTAGGGAGAGTTAAAATGGAAGAGGAGGAAAAAGAAAACGCCGAGAATTACTAG
TTACTGCACACAAAAGAACCCTGATCTCGCCTAGTACTGTAGGAAACAAACAGAAGGATA
ATTCAGACCCTGCTGTTCTGCGGCATGGGGATGACGCCGTTGAAGAAGTCCCCGAAGTAT
CCCGGCGGCTCGTAGACGAGCTTGGCGATGATGTCCCTGAGCGTGATGAGGCCGTCCAGG
TTGCCGTCCTCGTTCACCACGTAGATCCTCTGCCTCTTCTCCGCGTCCAGCTTCAGGATG
ATCTCCTTCATGTTGTCCTCCCTCGTGCACGTGATGATGCTCATCTGCTTCTCCCCCGAG
CTCTGCCGCGCGCTCGCGATGAACTCCCTCGCCGTCAGCGTCCTGCATCCATCCATCCAT
GCATGCGTCCACCGTTTGTTTGTTCCCGATTACATGTCTGGTCCACAACAAGTTACACAG
CGAGTGAAATCTGTGTGTATCACCTGTAGTCTTTGTTGGACTCCGAGTCCGAGGCCGTGA
GGAGGTGCTTGACGTCCTTGATCATGATGCTGCCGACGGGCTTGCCGGCGCCGTCCACCA
CGGGGATGCCGCCCACGCCGCGTCTCCTCATCTGCCGGAAGGCCTTGAGCGCCGGCTCGT
CCTCGCGGACCTTCACCAGCCGGCTCGTCTTCATGATGGGGAGGCCCAGCTCGGCCAGCG
TCTTGGTGCCCCAGTCCTCGAACCAGCTCAGCCCCACGCACTCGGACAGCATGTGCACCA
CCGCCGCCTGCGTCACGATGTTGCTGATGGTGCCCTCGCCGATGTCCACCACGGGGAGGC
TCTTCATCCGGTACTTGGACAGCAGCAGCAGCATGGTGAGGAACGTGTCCGAGCTCTGCA
GCGCCAGGAACGGCGCCCACCGGAACGACCCGGAGATGTCCTTCACCTTGGTCTTCATGA
ACAGCTCCGACGACGGCAGCGACCCGAACGCCTCCGCCACCGCGCCCTCCGCCTCCGACG
CCGCGGCCGGCTTCAGCTCCCTCGCGCCGCCGCTTCCCGCGTCGAGGGTCACCGTGCCGA
GCTTGGCGGCCAGCTCGTCGGCGCCGAGCGCCGCGGCCGAGGCCGAGGCCTCCGACTGGT
GCAGCAGCCAGACGGCGATCCCGGCGAACTCCACGATGCCGATGTAGCGGTCGATCCAGC
TGGCGTCCTCGGGCGCCTCCACGTTGCGCACGGGCGCCCCGTTGATGCGGTTCCGGGAGA
GGATGTCGACGGCCTCGGCCAGCGTGGCGTCGGAGGGGATGTCCACCAGCTGCGACCCGA
AGGTCTGCGGGAAGGACGACACCGGGATGGCGTCGAAGCAGCTGTTGAGCTTGTCGCCAC
GGCTCAGCTGCGGCTGGTCAAGGCTGTCCCAGATGTCCTCCACCCGCATCCCGATCTCCG
CCTCCGGGCTCCACCGCGCGCTCAGCGGCGTCTCCGGCACCGCCACCGCCGCATCCTCCT
CCTCCTCCTCCCGCCGCTCCGGCTTCGTCCGGATCTCCCGCCTCGCCTGCATGGCTAGCT
ATGCTCCCCCCTCCCCTCTCTCCCTTGTCTGTCGGAAGCCTCTGCTCTACTCTCGTCTTC
TTGGCTCCCTCGTGCACGACCACGACTGACCTTGCGTTGCGTTGCTTGGTCGCTGCTTCG
GCCCGACAATGGTGCCGCGGGCGAGCTGCCCGAAGGTTTCGCGCCAGAACGACAGGGGGC
GCTGACAAGTGGTCCGCCGCCCGGCACTGCAGCTGAGCTCTGAGACATGCACCAAAATTC
CAGCAAAAGAAAACAACGGAGCTCCTCTGGACGAAAACGGGCCCAAATTTCTAGTGCACC
TTGGAACGGGCCCGGCACGAACTGCCGAGATGGGCCGGGCCGCGTGGTACGCTTTTCTAT
CTCCTTCCGCAAGTCATGCCGGGGACCCACTGCGGACGCGCTGTTCCGCTGGCAGGTGGG
GACGAAGTTCAAAGGGCCCACCTGGCAGCGTCCTAGAAAAGCGGCTCGATCCCCTCCGCC
CCTCCCCTATACAACACCAACAACTAGTTCCCCACCTCCGTCGACACCTCCCCCAAATCG
AAGCGAGGCCTAAAACCCTAGAGAAGCCCCCGGCACCGCCCCGCCTCGCCGCCGCACCGG
ATCTCGCCGCCGTCGCCGTAGCCGTCGCCATGGACATGGCAGCGATGAACGACCCGGAGA
GGCTCTTCTTCTTCGACCTCGCCTGCAAGACCGCCAAGGCCACCTACGACGAGAACCCGC
TCGACGCCGACGTAACGCCTCCTCCTGCCCCCTCCTCCTGCTCCGCTCCGTCGGTTTGTT
CCGAGGGGAACGCGACTGCGGCCCCGTCTGATTTGATCTGATCTGATGCTTTTTTTTTTG
TGCGTCCGCAGAACCTGACGCGATGGGGCGGCGCTCTGCTGGAGCTGTCGCAGATGCATA
ACGGCCCGGAGAGCCTCAAGTGCCTCGAAGGTACGCCGCGAGATTCGTGTGTATTCTTCG
GTGAATTTGGATTGCTTCCGTGTGGAGATTCGGTGGCTACGATTGCTTCCCTCTAGAGAA
GTTCGAACTTGGAGCAGATCCTACATAACAGTCGGGCCTTGGCCTTTAGTCTGGTTTGCT
AGCATTGTTATAAATGTTATTGTGTTTAACGTAGTTGCGCTTTTATGCGCACTAGTTTTT
ATTTATGTCATGATAAGTTAATCTGATTTGTTAGAAAATAGGAGATCATTATGGATGGTA
GTGTGCTGAACACTGCAGTATTGGGTTGGTACAGTATTCTCAACCACAGAAAAACATTAA
TACAGTTTGTAGTGCTAGTGAACAACTGAACATATATGGATTAGGCGTTTGGGGTGTGTT
AACAGCTTGTTTTACCTGTAGTTGCATTTGTTTTATGATGGTATTTATGCTGCCAAGCAC
ATTGACCTTCCAAAATTATTTGGCACAGATTGATTGTAAAACTTCAGTTTGGTTGTTTTC
ATGTACTGTTTGCTTGCTTTATTTTGTTATATATCATAGCGCCATGTTCTGAGTTCATTC
TGAAAGTAGGATTTCGGGCATGCCTGTTTAGTTGGAGCGATAATAGGCACTGATATTTTG
GAGTTCACATATAATCACGCAGCTTGTGCGCGAGTGAGCGTTTTATGGTCACCAGTTTTT
ATTTAAGTTAGTATACTTGAGAAATAGGTTACTCTCATTTGTGAGAAAATAGGAGATCAT
TATGGATGGTGTGCTGAACACTGCTGTATTGGGTTTGTTGGTACGATGTTACCAACCACA
GAACAGACATTGAGACTGTTAGTAGTTCTAGTGAACATATGTGCATTAGGTGTCTGGAGT
GTCTTCACAGCTTGTTTAACCTTCTTTAAGATGAGTGCTTGTAGCATCCTTGATTGTGTG
TGATTTTGTTCCCAGCATGTACGGAACCTTCAGTTGCATTGTTGTGTGATTGAATGGAAT
GTGTGGTGTTCTTTGTAACATATATATGGAGCCTGTAGTTGCATTCGTTATGTGCGTTGA
TCAGATTGATGGTGATGGTGGTGTTTGTATATTTAGAATAACAGGCAGATTTATGGGATC
TCGTCCAAGTTATTTTATCGTTAGAAACAGCTTTACTGTTGTACTGTTTTCTTTTTGGAG
TTGTCTTTCCTGTGTTAGTAAAAAATAAGTGTGCTTAGGCCTGCACTGAAATGTGCCTGG
TGCTAGGCGATAGCAGAACGCCTAGCTCTTAATCATGCTAAGCATGTGATTAGGTGAGGT
AGGGTCTAGGCAGTGGCAAAATCCACTAGTAGCGCCTAGCGTTTTTTCCTTGGTGTTCAA
CGAAGCAACACTTTGATCTATGAACACTTTCTGAGGTGGTTTGCTGGAGACATATGCATT
AGATTCATTTCAAGAATTCACCACATGTCAGATATTAGAGCAGTTACTGGATTCAAATTT
ACCTATGCATTAGATTCATTTCAAGAATACACCACATGGCAGATATTAGAGCAGTTACTG
TATTCAAATTTATACTGCATTGCAACACCAGGCTCGGCCTATGCTGCCAAACACAATGAC
CTTCCAAAATAATTCGGCAGAGATTAATTATATAACTTCAGTTTGATTGTTTTCATGTAC
TATTTGCGTGCATTATTTTGTTATCAACAGCGCCGTGTTCTAGATTCATCCTGAAAGTAG
GATTACATGCATGCTTGTTTAGTTGGAGGGATAATAGATACTAATATTTTGGAGTTCGCA
TACTATCATATAGCTTGTGCGTGATTGAGTGTTTTGTGTTCATTAACTAAACTAACTGTG
CTCCTTCTATGTACTCCCTCCGTCCCAAAA
