Map Locations of contig_40227 (3769 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_40227

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55741 1 442 bp AK374251 Available Available None





CDS Structure of MLOC_55741






Contig Sequence (3769 bp)

>contig_40227 3769 assembly3_WGSMorex_rbca.fasta
CCTCGTCGGGCTCTTCGAGGACACCAACCTCTGCGCCATCCACGCCAAGCGCGTCACCAT
CATGCCCAAGGACATCCAGCTCGCACGCCGCATCCGCGGGGAGCGCGCCTAGGATGCGCA
TGCACCCTGTCCCTGTCCGATGCGCTTGGTTGCTAGTAGCTGCTTATGACTCTGTAGTTG
TTTGCCCTCCTTGTATGTCGTGTGGATGCCATCGAATGTTCAAATCTCTGGTTTGATAAA
TGGAGTCACGCATCTTTTATGCTAAATCTGTCTCGCTGTTCTAAATTTTCTTTCCCTACC
AGTATATGTTGTGCTTGATGGTCCGATTATGTGGGTTCACTGTAATTATGGCTCCCATTT
GATTCCCGCGAGCTGGGAGCTCATCTGCGTGCTGCAGTTTCATGTTTGTCTCGGTGACTG
CGAGTTTCTTGGAAATTTAGGCTGCGATCTGGGAGCACATCTAGGTGTTGAAAATGCAGA
TCTCATGTTCTCTTTTCAGTAATTAGTAATCCCGTATGCGTTTTTTCTTTAAACAGGCCA
TTACTTTCTGTGGATTCAGTTATAATAAGTAAAAATGTCAATCTGCTACGTAGTTTCTTG
TGCAGCTACCAATCAATTCTGAAACAGCTCTCATCTGTGCATCAATATGCGAGAGGCTTG
CTCATATGGACAGACAGATATTTCAGCATACTTGTTTTATCGTGATGCTCTATCATGCCA
CTGAAACACTGTTTTCCCCTGTGGTGCTATCAGATCCATGTATTTTAATGTGTTGTCTGA
AGAGGTTTATCAAAAGCAGTGTAGCTGGTCTGTTCCAGATTCAGAGTTACGCGAGTCTCT
GAGGCTACCTGTTGCAGAAATTTTGTTGCCTGCATACAGATCTTGGCAGAAGCGTTACAT
GTATTTATGAGCACAACAATCAATTATGTTGCATAAACCAGGACATGAGGATCATAATAG
CACTTACTAAAACTTTCTTGTTTCCATTCTTTTTTATTTTGTTCTGGTTTGGGGTTAAAA
AAGATGCCACTACAATTGTCGCCAATTTCAAAAATGCCATTGCAGCTTTCATCTTTTGAA
GAATGCCAATGCAACTGCTATGGAGAGGCGATGAGGCGGGAATGGTCATGAACTGCACTG
AAATTTCGATGAGCTCGCTTATGCTGGTCGTCTGAAAGATCAGACTCAGCTAGGTGATGC
TGGACGACCTGGTCAAATTCTGGGCGACGCGGACAGACTGGTGTGTCAGTGCTTAGATGG
GTTTTTATATGTTAGCAAGTTGTGTGCTTCATCTAGTAGTGATCAATGCAGAGATTGTTT
GTGTTTATCCTGAGGTTCTACTACTGCCGTTGCATATTTGTTAACAGGTCTGATAACATT
TCTTGTTTTGGTTCTTTCTTCTTCTTTTTCGCAGAGCCTCAAGAATGGATGATGAAGAAC
CTAGTGATGGGTCCTTCACAACACACTTTCAACTACTCGTTTGCGTCAGGTTGCTGAGAA
ACATCTGAACGACGAAAAGAGGGGAACCTTATATGATTGTGGCTTTGTATCTATGATGAA
TATTCCCCCTTCCCCGTACCAGATGAGCTGCTTGACTGCATAGCCATGAAGATTGACCCT
AAGCGGGGTTTGTTTTAGGTATAAAAAACACCCCAAACATTGCAGCTTGGGATTTTTCTT
TTTCTGTTGCAATGTTTTAGTTTCTGAATGACACATGTCTTCTGCGTTTTCAGTCATAAA
AAGAAAGCTATATTGTTTACGATAGACATGGTGCAATATAGTCCCATCCAAGACAAAGCC
GGTGGAGCTCCTGAAGAGGAATGAACCTTTGTGAGGTGTGTGATATTTATCAAGAATTGC
TAGCCTGAAGGACATGGACCTGAAATCCTAACTTGGCAGTCGTTTGATAAGTTTTTCGGT
TGTCAGTTACATTATATTAGTGAAATTTGATGTATCATTAGCAAATGCAAAACTCAATTG
CCCATGATCTTAAATTGCAAAATTCAATTGCCCATGATCTTAAATTGCAAAACTCAATTG
CCCATGATCTTAAAGTGCAAAACGTCCTCCTGGCTGGGAGCCCAACCAGTGAATATTTGT
GATTTTGGTTAGTCAAAAGTGCTAATATTATTGTTACGAAAACTCTAACATACGCACGGA
AAATTGTACTAACTCTCTCGTATGCTATATCTTATTATTGTTTTTATGATATCCTGGCTA
CTTGATTCTTAACTTTTTGATCCTCGGACAAAATTTTGATAATGCCTATTAAATATGTCT
TGAAGTGCGTTATCATTGCACATAATTATTTGTTCTCTTGTTTTTTGTATTATGCTCGAA
GACATGGATGCTCAAATTAAGTATTGTAATGTGAGTAAAGGAAAAGGGAGGGAGATGAAT
ATGGAGTGGGGATGGTGGGAGAGAGAGACATATGAGTCTACCTTGATGTCAAATATATCT
GAAAAACATGATTACGTGTTTCAAAATGCAAGTGCGTTGGTGGATGGAGGTGGAAGGGAA
TTGCAAAATGAATGTCCCATTGATAGGGATGGAGTGAATTTTACCGGAGTGCGGAGGGGG
AGGGGCGGATATTGTTGGTGGAGGAGGAGGAGGAAGAAGAACGGTTAAAAAAGGTTAAGA
GTGCTACATAAGGATCCACAAAAATATACGGAAATTATAAAACACAAACGTTCGAATATT
GCCCATGGAAAAATGAAGCGCTTTTGATGGCAATTTTAGTTGACGCGAGAACGACAGGTT
TAGTGTCGTCCTGGCATCAACTAAAGTTACCATGAAAAAGTTTGATTTGCCATGGCCGAA
ATCCAAATGTTTGGAGTTACCATGAAAAAGTTTGATTTGCCATGGCCGAAATCCAAATGT
TTGGGACTTATCATGGTCCAAAGTACTGAGTATAAGGTAGATTGTCGAAATCATTAAATA
TATATACCGAGTTAGTGCATCCTCAAACCGATCGCATACATCCGGACAGCGCGGTTCAGG
CGTGTTATGTCATTCGACACGGTGCGGACGCGCTTTTTCCCACAAACCGGAAACAAAATG
TGTCTGTGTGTGTGTGTGTGTGTGGGGGGGGGGGTGTCCTCTTAGTGTTGTAGACATTGA
AGCGGCGTGCCGAGTGAAGCACCGCCTGCACCGCTTCCCGGTGTAGGCCACTACTCCACG
TTCAAATGACACGCCGTTAGTCTGCCCCCCTACATTAATGATATACGGTTGCCAAGGAAT
CTACTCTGACACCACATGTTCGTTTGTCTGCCGCCCACCATTAACCACATCGCCACAATC
CATTGCCATCCGCCCACTATATAAACTACAACCCCAGTCATCCTCCTCTAACCTTTTCTC
CTCTGTGCACCATACCTGCCATGGCCTCCTTGCGCTCCAAAGACCTCTAGAAAACCCTCT
ACTTGGAGCAAAAAAAGGAGATGGCCGCCATTGCTACGGGCTGGCAGGCCGTTCTGCAGA
TGGGGCCCGACAACTCCCCAATGAAGGATGAACATGTGCCATCCTCCTTGTCTGTGCATG
CCTGCCTCGCCATATGCAAGGCTTGTGCGCACTACACAGACATGCCGCGGGAGGAGTAGG
AGACCAAGTTCCAAGAGACGCAGGCCGACCAGGCCAACATACTTGGCCTCCTCGAGGAGC
ATCGGTATGCGAAGAAGTGCAGGTGTGTGGAGGAGTAGAAGGCCAAGGTTTGACACGTGT
TGGCATATCCATCGTGCTAGACATGGACGTGTTGGGGAACGTCGCATGG