| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_40173
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55675 |
3 |
2214 bp |
None |
Available |
Available |
LOC_Os06g06290.1, FRAME:-3, EVALUE:0.0, 13106.m00645 protein GDSL-like lipase/acylhydrolase, putative, expressed |
CDS Structure of MLOC_55675
Contig Sequence (3954 bp)
>contig_40173 3954 assembly3_WGSMorex_rbca.fasta
GCCCGACCCCGACGAAGGTCGATCCGTTGTTGCGCCGGCCGCCGACAGCACTAGCGCCGC
CCAACTACGCTGCCCACCTCCACCGCTATCCTCTAGCTGTGTCGTTGCTAAGGAGGCAAC
AACCGTCGCCGCCCACGGAGGTGACCAACTCATCCACCATAGGGCCCAGCGTCGCCTCCC
ACCTGCGCCGCTGCCACGTAGATGTAGGCGACTCCAACCACCCACCTGCGTCCACGGAGG
CGACCACCACCGCCCTCGCTCTCCATCATCTTATTTCTCTGATTTGTCTTTGTCTATATG
TGCAGATGTTTGAGGTAGGAGCAGTGACTATCATTGAGTAGGAGCAGGAAGAATTAGTGA
CAACTACAATTGCCAGCTGAGCTTGCTACTAGCCATACCCCCCTTCTTTTCTCTCCATCT
CTCATATACATGGATTTGCAACGGCCAGTACTCTCTTGATCCCTTTTCATGAGCATCTGC
CCACATTCTGTTGGATGTTATGCTATGACTGATAGAGATTTTTTTGGTAAAACCATTACC
TGTGTTTAGATAACCAGAACAAAGAAACAAGTGTATGTGATGCTGGATCTGCACCTAAAG
CAAGTGTACCTGATGTTCCTCTTTTCTAGGGTTAGCACTGGTTTAACTCATAGATAGTTG
AGCATTGCTCCTTCCACTACATCTTCCATGAAGATGATGCCTCCATGTGAGAAGACCCTC
TAGTGGACCCATCTCCCTTTTGGTATTTGGGATGAATTTTACTATGTATCCTTGTTTCCT
TTTGTTGTTTTTGTATCTTTATGGATCTTGTGTTATGTGAGTCTAGAGAATGTATGAATG
GACTTGTTCTTAGTGTTTCCTCTTGTGATTTCTTCCGTGTTCTTCTTGTTCTTGAGGGTT
TCCCCTTTCAGTTCATGAAAGAAATGTCGGTGTAGGATTTTCGGGCTAGCTAACACAGTG
ACATCCTATTTCTGTTGTTGTTTATTGAGAAATGTACGTACAAGATAAGTGTTGAGTGAT
GGCAATATATGCCAAATGAAAAAAAAACATAGAGCACAAGCAACGAATCTATACCATTTG
ATGGAACAAAGCAACACCAATTTATTCGAGAGTTGCCTCCGGTTTCTTCTTCTTGGGCAA
CGTATAGATTATAATTTCAGCACCACCGTACCATATATATGACACTGAAACAAATTTCCT
TTTTTCCTTTAGGTAAACTGAACCTCAAATCAAACAATAAATAATACTACTGTACTACCA
CAGCTCCATAATAGATAAATAAATAGAATAAAAGAATGTTTAGGTGTGGAGGATGGCCGG
GCTGCAGTAGGGCCCGTTGAGCCAGCCGTCGGTGATGTGCTTGTACGCGGCCTCGGTGAG
GTGGATGCCGTCCCAGCTGAGGTGGTCGGCCGGGCTGGCGCACGCCGCCGCGCCCTGCAT
CCCGCACCTCGCGCTGTTTGCGTAGTTGTACTTGCCTCCCCCTGACCCGCAGCACGCCTC
GAAAACCGCGTTGAATCCTGCACACACACACACACAGCACAACACCGTTGTGAGTTTCTA
CTACTTCCTATTGGATCAAGATCTTCTTGCTAGTAGAACGTGCATGAACAGTGTCCCCGG
TCGGCGCCATGTGTTGGTTGGGCGTGTCAGTCGGTGTCCATCCACCATTACTGATTATTC
GGCCATTATTTAGCTCAAGATCTTCTTTTTGAATGATTGTTTTTTCTGGAACGATTTGAA
GATCTTCTATGCGCGAGTGTCGCTGGCAGGCTCGAGGAATCTCACATGCACGGACATGCA
TGAGCCCAGAGTGGGCAGTAGCTGCTAGCACCACACTGCTGCTGATGCCGACAGTGACAC
TAGTGCCGTGTCCACTTCTGCTAGCCCGTGCACGAACGCGGAATCTATCTATCCAACCAC
ACGTTACGCGTGGCTTTGTGTGTCGTGTCCCTGGCGTGTTAGTTAGACTTATTGCCGCAG
GAAAAATGCTCAACGGCTAGCCAAGACTGTCGTCGGGAGGTCGACGCGTTACCGTATTTG
CTTGGGTTCTGGACCATGTCGTAGACGGCGGAGTAGAAGTCGCCGTACATGACGCGCGCC
GCCCGGCCGTAGCGCTTGCGGAGGCGGGCGATCTTGGCCTGCAGCAGGTTGTTGTGGAAC
GTGGAGAGGTCGTTGAACTTGCGGAGGCAGCCGAGGGTGTCGTAGTCGGCGCTGCTGTTG
GTGCCGTAGACGGTGAGGTAGATGGGGAAGCAGCCGATGGGGAGCACCCCGGGCACCACC
ACGTCCCTCGCCCCCATGCCCACCACCTTCTCCACGCCCCTGATGATGGTGTTGACGATC
TTGGTCGTGTACCTGCTCGCCTGCCCCGCGCTGTAGTTGCCGAACAGCATCGCGTTGTAG
TCGTTGCCCCCGAACTCGCCGAACACCACCAGCGAGTCCCGCAGGTACCGCTTGCAGGCG
GCGGCGTCGCCGCACACGGTGGAGGTGATCTGCTGGAACCACTGGATTTGGAGGCTGATG
GGCCCGTTGTTCCAGATCTTGTCGGACAGGCCGAGGCCGCGGAAGAAGGGCGCGTCCATG
GCCGTCGCCCCCGTGATGGCCATGTTGGCGCCCTGCTTGAAGTCCGTGCCGTTGGACGAC
TTGGACGGCGCCAGGAACGGCACCCCAAACTTGGTACCTGCGTGCATGCATGCGTGCATT
TCCCATTGTTTATATATGTGCGTCGTCGAATCTCACTCTGTTGTCTGTTCAAGCAAGAAC
CAAGAAGAAGAAGAAGTAGTGTATATTAATTTGAGCAAGTGAATGGAGCACGCACTGAGG
AAGTCGACGATGACGCGGCCGTCGGAGCAGCGGCAGGTGGGGGAGCCGAAGTAGGTCTCG
CCGTAGGGGGGCTGCGTGAAGGTGATCGCCGTCGGCTTCCCGCTCGTGCACAGGTTGCCC
GTGTCCGTGATCGAGTCGCCGAAGTTGAACACCGCGTTGTACTTCTGGGCGTGGCTGGAC
GCCGCACCCGCAAGAAGCAGCACGGCCAAGCGTAGCAGCAGCAGCTGCTGCTGCTTCCGC
GCCGCCACCAACGGCGAGCTCATCGTCCCAGCTGCCGCCGATCGTCGACGAGAGAGAGAG
AGAGATAGGGAGGCACGCAAAGCGGCTTGAGGAAGAAAGCTATACGGAAAGGAAAAGGAA
TGGGAATGGCATGGCCAGTGGCCGGGCTTTCTATAGCCCCCGTGACCGGCGCTTTAATTT
GCTTTCGAATCTCTGGCGCGCGTCCCCGGCCGACCAGCAGAGCCCCATGGCTGAGAGTGA
GAATGCATGTTACTATCCAGCTAGCAAGCTAGCTAGATTGTCCTCCCCTTTAGTATTTTA
TCAGTGGTTGCCAGGGAGAAAATTGTCTCACCCTTTGACCTTTGTTACCCTTTCAGCTCG
GTTTGTCTTCCCGGAGAGGAAACTTCACGTGAGAGCTGTCTGTAAAGCTCATCAGCATAT
ACGACCCTGCCCGCCATGATCCCAAAGGAGAAAGGACGAGATTCTCAACAAAAAATAAGG
AGAAAGGACGCACAAAGCAGCTCCACACATGCATGCATGCATGCATGGCTCTTTTCCATG
GAGAGCTTCACCTGCCCATATGGCACCTAGGAGAAGAACAAAAAGAGAGAACCATGTGTG
ATCTGAATATTAAGATTCATATAAGGAAGTGCTTAGGGCAACTTCAACGCACGACTCCAA
ATCGTTCCTCAACGTTCGTTTAGGGTAAACAGACACAAACCACGTCCCAACGCGCGAGAG
GAAATGGATGAATGTCCACTTTCGATCCGTTTCCTGCCCAATTTTGGGCCGCGTTTGCGG
CCGAACTGGCAGCAAGCGAACGGGCAGACGCACGCCCTTGTCCTTCTCTGGCTGGCTATC
GGGGACACACCCCTCCCACTTTTCCTCCATTTCGCCGACCCCCCCCCCCCCCCC
