Contig Data
morexGenes
Links



Map Locations of contig_40164 (6122 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_40164

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55663 1 1360 bp MLOC_55663.1 Available Available LOC_Os07g48030.1, FRAME:+1, EVALUE:2e-139, 13107.m05131 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_55663






Contig Sequence (6122 bp)

>contig_40164 6122 assembly3_WGSMorex_rbca.fasta
CACAAGGGACTATGGAAATAGATTAGGACTAGGAATCCTAATACTATTAGGACTCGGTTT
GGCTTTCTTTCCTAATCTTACATGAGCAACATGATTAACATCTACAGGCACTATCGGTGA
GCTTGCATGCTTGGGTTGGGCACAAGTCGGTTCTTGGAGACTGGGGAGCGTGGCGCTCCA
CCTTCATCCACTGGTAAGGCCGGCCGCCAGTAAGTGGCCATCTCGCGGCCGCTTTTGGAA
GCAACTCAGAAATTCAAATCTCTGCCTGAGTCGTTGGGCTCGATTGGCGCCTCTGATCGA
TCTTTCAGTCGTTATTTTGTGTTAGAATAATTTGAGGTGCATATCAATCTGTTGAGGATA
AATAATCACATAGCACCAGCAAGAAGAAGAAGAAGAAGAAGAAAAAGAGGAGGTAGAGGA
ACAACAACAACAGCACATCAGGTAAGAAGAAGAGGAAGAGGGTGGATGATGAACTTTATT
CATTCACCTAGTTGGCTCTTAATAATGTATACTGCCATTTGATAATAGTTTGGATGAACC
ATAATTTGTTTCGTAGTTAGAAATAAAGTTGTTAAGATCGTATGGGGTAAGGTCACCACT
AATGAAAAGTGATGACAACACGTAATGTAGGTTACAACCAAACAACGTGTTCTATATGCG
CCTAATGCTATGCAAGCAACCAAATAACGGTCAAAATTAGTCTTCTCATGGAGCTAACAT
ATATGCGGGCAACCAAACAATATGGAGTTCATGGTTTATAGGTTGTATGCCTCATGCCCA
TCTATGAAGACTATGCAAACACGTCAAAATATGTGCGGGCAACCAAACGTGTCGTAAGAG
CATCTGTAGCCGGACAATAAAAACTTATGATCAAATATATTTAATTGGGTATATGTGTCT
CGATCTTTACCCATCACATGATGCTTGCCAAGTAGAGATTCTATAAGATTGGAATAAGAA
GTTCACCCAACATAAAAAGAAAATAGATATGCCATTCACAAAGAAAAGCATAAATTTGGT
AATGAGATAGAGCTCATTGCTCAAAACATAGAAAATATTTGCTAAAAAAATATTCGGATT
GCGCTCGTTTTATATTTTAATAATAATAACTCATATGAAGCATTTGACAAAAGTTGCATA
AAAAGGTGTAAGATGATCTACATATATTTGCTCTAAAGTATATATCGTTTATGCCCATAA
TTAACAAAAATTAGTGGAATAATGTGTATATTAGCGCACACATTATAACTTATGACCACA
TGCATGACTTGATGATGTGGCATGGTTACATGAGAAAAATAAATATTTATGACTAAATGC
ATGACTTGATGATATGGCATGGTTGCATGAGAAGGAAAAATAGGTAGTCGGTTGCACCTA
TTTAAGAATAGAAGATTCATTTGAGAGGTGTACTTGTCCTACCAATGTTTTAACAGCAAA
GTATTTCAATATCTCTCACGCTAAACACGTTAATGGCGTTTCCCGAACATAAATGAAAAT
TTTACTCCCTCTTCACCATACAATGACCAGAGGATCCATAATAGGAATCTCGTAGACTTG
CCGGGAAATAGAAAATTTGGAATCGGCTTTATTTTGCGCTAAAAAAACTTGAGGCCTTTC
CCCTTATTATATAGCCTATTTATACTTTAATAACCTAGTACCTGATCGGTTGAAAGCAAT
ATTTACTGTTAGATAGAGAGATGCTGATAGGAAACGGGGTGGTGTTTACTTATTCTCAAG
AATATATAGAAAGGGAAAAGCTTAATATCCACTATTGGAAGTTCTTTTCTCATAAATCAG
GTCAAAATCTTGAAATCATGCCAAAAACACGGGGGGTTACGCAATTTTTTCCAGTGAGAT
CATCTATTCCCTTCTCTTTGGCGGATTCAATCATGCCCTGGTAATTGTGGCTTGGCTTAA
GTGCAAAACACACTTTCATGACTAATCATGACTAATCATCGATGATGAAAAAAAACCTAA
ATTATATTTCATGCACTATGGTAGCCGAATCCCTCAAATCCTTCTCAAACGTTCGGACTA
GCGGATCGGTCACAAAAATTTGACCCAGATGAGCCTCTCAAACCGGCCTTAAACGCCCGG
GATAACCGGCATCCCCCATTTTCCAGTCCAAATATGCGGCCAATATGGGGGAGCCCGGCC
GTGCCCGAGCACAACCGCCTGGCCCACACTGACCCGCATCGACCCCACATATATCCGTCC
TCATCCGTTGGCCGGACCATACAATACCCACTTCACTCGACTCCCATCCGACGATCTCCG
ACCTTCTCCGGCATGTCCTCAAGCGGGTCCGACTTCGACTAGTTCGGATCTGCCGAATGG
GGGGAGGGGGGGGGTCGTCCGGTGTGGAGTGGAGGAGGCAATGGTGGTTCGCATTGCACT
CCGCTGCTCCCGCGAGGACAGTGCCCGGCCGATGGGAGGATATGTCTGTCGCGACTCCAT
AACGTCCGTTCAAAGGGCACTTGGTTCCTCTGGGCGGGATCATCCATGTCCCGGTGGGCG
GATCCATTGACCGGACCCGCGAACTTCGAGTCCCACCAGGAACGAACTCCCCGCCATGGG
AAGGAGAGGATAAGGATCACTGAGGCCTATCTCGTGGAGGAAATGGCGGAGGCGGAGGTG
GCTGATCCGGTGGCGTGGGCGGCCACAAAGGAGGAAGTCATCCACGCCACATTTTGAAGA
AACGACAGCGACGGACCATGCGTGTCCTCGCCCGCGAGGAGAATCAAGCGGTGTGTGAAA
TAGCCAGACTGCCGGCGAGGATAGCTCCGCAGATCCGGCTCGATTCGTTCTACGTCTTCG
ATCGATACTTCCACTACAAGAACGGCAAGGACGTCGGGAAGGACAAGGGAAGCAGTAGAT
GATCTCCATCGTAGCCTAACATGTCAAATTTTATAGTCCGATTGCATGTTTAACAATGAT
GGAGTAGCGAAACGAGGTGTGTGCGTTAAAGTAGTAGTTACATGAGGTGTATGGATTTAA
GATGTATGATTTAAATTGTCCAGATATAGAGTGCGTTATTTAAGACGTGACCGGTCCGTG
GACGTTTGAGGGACCGGATTTGTAGGGTAGATGCTCTTAGTTCCCCCTCACCATATCCAC
CGGCAGGTTCGGGTAAGAGCATCTTCAACAGTCCGTATGTTTAATCGTTGGTATAAGTGT
CCACGTCAACAACCAACAGCACATCTTACAAGCTCTTCAATGGAGCGTATGTTAATCGTA
TGTAAAATAACTAAGCAGGTTTATTAAATATTGAAGAAATAACCATGCTAGCCTCGGAGC
TTGTGCGTGAACCGCTGGTTCAAGTTCATGTCATTCTTTTTCTTCTTTTATTATACGCCA
TGTCATCAAAATCATCTACATAGTAATTTTACCAACCATGATCATACCATCATTGGAGAT
GCCCTAACCAGGCTGAGGTCTCAACGTCACAGTTGCCGAATTGTCTCTCCTCTGGCCGAA
GGCGACATGACCGCAAAATGACTGCGCACGGGTCAAATCGAGGGCGAATTGCCTTGGAAC
AACGCTGACGCCCTACTCCTATCCCTACACATGCCTCCAGGCGTCCGTGAGCATTGAATT
GATAAAGAAAAAAATAGATCGTTCAATGTTTTTCAGATTGTTGCGTTGCAAACGCCAAGG
GAGATCGCTCAAGTTGGCCCTGTTGCATGGAAAATGCAGGTGTTGGTGTTGGCGGTAGCG
ACTCAACTCAAGGTGGAAGCTGCCGCAGCCTAAACCTTGGATACCCGATCGAACGGCGTT
GCTCAAGCTAGAGACTAACGTTGGACTAATATGACCTAAATTTCGGACGCTATATCCCTA
CTTACTTGCTAGTGGGAGACCGGCCGGGGCCGATTAATTTGCACATGAGCTAAATATTTG
GCTATAAATATGCATGCGATGTACAACTCTCTTGCACAAGCCACTAAGCTCCACAACCAG
CAAGTGGCTAGTAAGGCACACGCATTGCTTTGGTCTTATCGCTAGCTAGCTAATAACCAT
GGCTTCTTCCTCATACACTTCCTTGCTGGTGCTCGTGGCTCTGGTCACGGCGGCGTCGGC
GCAGCTGTCGCCGACGTTCTACGACACGTCGTGCCCCAGGGCTCTGGCCACCATCAAGAG
CGGCGTCATGGCCGCCGTGACGAGTGACCCCCGCATGGGCGCCTCGCTGCTCCGGCTGCA
CTTCCACGACTGTTTCGTCCAAGTAAGTTGGTCACATGCATGCATACACGGCCTCATAGC
CGGCAATGGCATGTACCCTGTTTTGTTTCGGTGTCGCTAGATAAATACCAGGGTCCAGGG
TTAACCATGGGCGCTGCTTTACTATATGTGATATGCAGGGCTGCGACGCATCTGTTCTGC
TGTCCGGCATGGAACAAAACGCTATCCCGAACGCGGGGTCGCTGAGGGGCTTCGGCGTCA
TCGACAGCATCAAGACGCAGATCGAGGCCATTTGCAAGCAGACCGTCTCCTGTGCCGACA
TACTCACCGTCGCCGCCCGCGACTCCGTCGTCGCCGTAAGAATATCATCATCTTACCATC
ATATACATCATCGACCGGATGATCGGCAGCTTTTACAACATGCTTCTATATATAACAGTT
TGCTTGCCTTTTGTTTGCATTATTCGCGTGCAGCTCGGTGGCCCATCATGGACAGTCCCT
CTGGGGAGAAGAGATTCCATAGATGCAAACGAGAATGAGGCAAACACGGACCTTCCAGGC
TTTAATTCTAGCCGCGCAGAGCTTGAGGCGGCATTCCTCAAGAAGGGTGGCCTCAACACG
GTCGACATGGTGGCCCTCTCCGGCGCGCACACCATCGGCCAGGCGCAGTGCTCGACCTTT
CGGGCTCGGATCTACGGCGGCGACACCAACATCAACACGGCCTATGCGGCGTCGCTTAGG
GCCAACTGCCCGCAGACAGTCGGCTCCGGTGACGGCAGCCTGGCGAATCTGGACACGACG
ACGGCCAACACGTTCGACAACGCCTACTACACCAACCTCATGTCCCAGAAGGGGCTCCTG
CACTCGGACCAGGTGCTGTTCAACAACGACACCACCGACAACACCGTCCGGAACTTTGCG
TCCAACCCGGCGGCGTTCAGCAGCGCCTTCACGACGGCCATGATCAAGATGGGCAACATC
GCTCCCAAGACAGGGACGCAGGGCCAGATCAGGCTCAGCTGCTCCAGGGTGAACTCGTGA
TCGACGGACGAGCTGCTATACCTACCAGCCGGCAGCTCGCTAGCACGATACGTGAATGAA
TAAGGCGAACCAGTGGCCAATATAAACACCAGCACTTGAAAACGTCTATTTTAAGTACGA
GCGGCAGCAAATCATGCAGGCATCTACATATATATGTAACATCGAATTCCCACTTTCTCA
TGCAAAGGCATGGAGAATTATTATCGATCCTACTAATACTTGTATACATAATGAAGATAT
GAACTTCTCTTTTTGACTTGGTATGACGTGGCCATGGAGAACTACTGTCAATAATCCTAC
ATACACTTGTATACATAGTGAAGATATACACTTCTCTTTTGACATTTGACATGAGGTAGC
CGTTGTTGGCCCAGACCTAACGCACGCACACACATTGTTGGAATTAAACACGCCGGCCGT
ATACGTGCCCAAGTCTGATATGTATACGTATCCGTGTAGATTTCTAAAGCATCAGCAAGT
AGGACTAGTGCTAGTTGGTTTTAGCTAGAATAAACATCCCTGCACCCCTGTAACAATTAT
ACAACCGCAAGATTGAGAACAGAAGCAATAAAGTATACACAAGGCTCGATACCAGCCTTT
GGCAATACGCCGGTGTCTCGCGTGCGTGCGTTTTGTGCTTCCGGCCGGCTACGTTGGTGT
AGTTGTTGCACCTTCACATAGGATCGATCAGGAGCAGCGCGACTACTTTGGGATAGCTTT
GCACTGCATTGGTGGATCAGTCAGGAGCCAGCTAGCGGTGTATTTTGAAGTAAAGCAATT
CGTCGAGTTTGTCACCGTCGTCCTTCGTCATCGGTCATTGCCTATCGTCGGAAAGTACTC
GGCGTCAGGTCTGGACCAACAATTGGTATCTAGAGGGAGGTTGATCTTCTAGTAACGGAA
GA