| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_40106
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55608 |
1 |
794 bp |
AK249251.1 |
Not available |
Available |
None |
CDS Structure of MLOC_55608
Contig Sequence (5039 bp)
>contig_40106 5039 assembly3_WGSMorex_rbca.fasta
AATGCAAGGACGCACTTTACTTCTTCCATAACCTGTGTGGGGCTATTCCTGCATACAGTG
ATAATATGGTTTAGTCCTGAGGTAAAAAATTGAGCATGTTCTGTATTGACAAGATCCAAA
AATTTAAGCGTAGCAAGATTCAGAGGGTTTATACTTCTTGACAGAGATTCATGTATTTGC
TAATAACTGAACAACGAAAACAAACGGGATTTATTAAGTATTTCTCAAACTTCCTTGGAG
TGCAGATAGCTCAGTTTTTCGTAATAGTAGAAAAATATTATTTGCTAGTTAAAGCAGATC
AATCCACCAAACATATCCTAGTCTCCCTTATAAACAGCATGGTGCATACATTAATACAGC
TAAGATTTTTAACTGGAGGTTGAGTTTATATGTTATTCTTCATGATATAAAACAATACTG
AAAGCTTGCAACTCGAACAAGCCAGCAAACACTGATAACATCACTTGCTCATGAGGTGGA
AAGACTCTCTTGTTGTGAAGGGAGGAGAAATAAATTTTATCATTGCTAGTTATGAAGTAC
TTACCACAAATATAATATCAGAGGAAATTCTACAGGACAAAATACCTATATGTCGGCTTT
AACAAAAAATATATGTTCCCTTTTCTTAAAACCATCAGATTAGCAGTTAATAGATTTATG
TTTTCATGGAAATTGTCAAATAATGAAATCAGCCAGCAGGTTTTGCAGAGAGGCTTCATA
CGTGGCTTTGTTACGCGACTTCAAGATGTCTAAAGCTGATGAAATGTTTTCTTGAATCAA
CTTCTTCGCATGTTCCTTGAACATGTCAGCAGCAATCTGCCAAAATACAAATATCAACAC
ATGTTACAACAGAATATGCTTGGATTGATGTCGTCTGCCATGTCTTCCCATACTTAGATT
GATGTCAACAATCAAATAGAAACCTGTATGGCGTCCAAGATACTATGACAGGTGTATAAC
ATCCTAAGATTTATGCTATTTGGACATAAGTGACAAGATGCCCCAAGAACTGATGAAATG
ATGCTAAAGCAACCCAGCAGTAAATTTCCAAAGAGAAGGGTTACCTCATCAGAAAGTTTG
CACGCAAGTTGTGCTCTCCTTACTTCAATGAGTGTGCCTATGTCCAGACCTAGAGAAACA
GAATATGTCCAGGTGAGAACATTCAAGGAATGCAACAAGTAATATATCAAGTAATTAGTA
TACAGGGGATATCCTTGCTGACCCTGCTCTAAATTTAATCTACTTGAATGATAAACCTTG
TAAGCACGATGTGACCTAAGAATGGAACTAATGCCTACAAAAGACAATGTATTTCAGCGG
TACCTCTACCAATAGACTTGAGCTGTATCGCGTACAAATTTTTGGCATTGTCCCGCATAG
CAATGTCGATCTGCCAAAAGATTATGAAAATGTAACAAAACAACCATGATGTCAAACAAG
ACAGAGACACACAGAAACCATGCACCAAAGTAACAAGAGATGAGCAAGCAGTTCAAAAGA
CATGCTCTATGAGAAAAAAACATCTGAGCTATGTGAATGTGTGATCTGTACATGTTAAAG
CAATCTACGTCTTCATCTTTATCAGCACAAAAGCTCTTCCCTTTCAATTACTACATTCAG
CCTGAAACATTTTTTTATAGCCATATGCTACTCGAACTTTATAAGTTTGATCATGCTAGT
CAAGAAACGACGACACTAAACACGTACAGTCAGTCTGTCTCTTTTTGGTACAAGTAACAA
TGCATGTCTCATAGTGCCTAACATTACATTACATACATTATTTTGCAGGGAGAATTTTCA
CACCAGTGGATTATGTATAACTCGCAGAATGATATGCACAGCCAATAAGGGCAACAAATT
TGTGATCATAGTACATATGTAGATATTAAAATTGGCCACGACAAAATGAGCATGCAAAGA
TCACCTATTGCATTGTGAAGGGTGAAACACTAGCTTCAGGAGATCTCTTAAACTAACAAC
GTTCTCAGAAAATGGGTGCAATTACACTTCAAAGTTTAGCAAAAATAACAAACACCATAA
TGGAGGCAACGTTCTGCTTTCTCCATGAGATGAAACCATGAACAGCGAAATGCATGCACA
AAAGTAAAACAATATATACTAATGTACCTGCGAATCAGTGATCCCGGAAAGTTACCATGA
AATCATAAACAGAGACATGTCATGCACAAAGGTAAAACAATGTATATTAATGTACCTGAG
AATCAGTGATCCCGAAAAGACGTTTCCACGGAAGTAGGAAGGCCGATGCGTCTCCAAAGA
CAAGATTTGACACATATATCAGCTTTTGAAATGCCTATGAAATATTTCCATGGTTACTAT
TAGGATATACAGACGGTTTTAAGTATCCATGTATTTACTTCAAAGCAGAAACAATTACCC
GCCGCTGTTCAATGTCAGCATCACGGTCCCTTGTTTCCAACCTCTCTCTGTATAAGCGTC
TACCAATCTATTGAATTGGGCATAAGCAGGCAGAGGGAAAACAGTGCAATTGTGAAAACA
GTGACTAAAGATAATACAAACATCTGAGAATAATACGGGATGCCAAGATGTAATAAAAAG
GCTTGGATCACGAGGGAATACCTCCATGTGCATATTTGCAGCATCTACATCATCGAGTCC
AAGGCCTCTTTTAAATTTTGTAATGACCTCAACCTCATCACCTTTGAGATCTTCATCTCC
TGGAGGAAGTACTGAGTAAAGAAAGCTGTGGGGAAAAAAGAAGATAAGAGAAAGAATGAG
CGAATGACAAATGTTCAGGAGGGTGAAACCACGGGAAGCTCAAATATCACATTGCAAAAT
TGGTAAGATGTGGATAGTGTCTGATTTCTAAAGACGGTAAATGTTCAAAACCAACAGGAA
TTTAGAAGTGCTTATCAAAAAGGTACTCCCTCCATTCCATAATTCTTGTTGTGGTTTTAG
TTCAAAAGTGGAGGGAGCAGTCAGACTGGGCATTCGGTTAGACCGAACCGATCGGTTCGG
TGCCTCGGTTATTTTTTGAATTCGGTTTCCATATTTTTCTGACCGATCGGTCTTTTGAGA
AATCAATGACCGAGATTTCGATCCATGGAGACATCTGTTCGGTCCTCTGTCTAACCAACC
AGAACCGAGATATGAGGAGGAAGAAACTGCAAGTCAGATCTTTAGAAAAAAAAAGGATGA
ACAACGCATCAGAATTCAACTGAAACATGCGGAAGCAACATGGGTTGTGGAGGGGTTGCA
GTATATCGTCGTCGACGCACGCGGGCCGCCGGCCATGAAGAAGTGATAGCTGCTGGCTCG
TGGCAGCCATGGGCAGATGGGCGCCGCTGCGTGGGGGCTATGGGCGGCTGGGCGCCACCC
ACTGCCGCTACGTGTGGGAGCCATAGGTGCCGGCCGCCGCTGGTAGGACTGCGGGAGCTG
GGCGAATCCACACAGGAGGCGGCGGCGTGATGCGCGTGCGTGAAGCCTGAGGTTGGAACG
CATAAGGATAACTGGATAAGATAGCGGCTGCCGTGGGGTCGTGTGCGTGGGTTGAGGACG
CCGGGAAAAGCTTCGTGGATGACTGTTAGGCCTTTTTTACGTGGATGACTATTGGGCTTC
GTTTTGCTGGGCTTTAATACAATATTCGGTTAATTTTCGTGCACCGATTCCAGTGACCAA
AATCACCGAAGTAGTTTCGGTTATTCACATTCGCTAACCGAGCAGATGACCGAAGTATCG
GTCTCCGGTTATTTCGGCTTCAGTCCCGGGGTTTTCGGCTCCGGTGTTCGGTTCTCAGTT
TTTTTGCCCACCCCTAGGGAGCAGTATATTCAAGAACCGAATAAAATGAATGCACTACCA
AAGAATCATACGACAATTTTGAGTTGAATTGTGCTCATGTGCATATGTGCGAACCTACCA
ATGTATAAATTGGTACTCCCTCCGTTCCTAAATATTTGTCTTTTTAGAGATTCAACTATA
CATACAAAGCAAAATGAATGAATCCATATTCTAAATTATGTCTATATACATCCGTATGTT
GTTCATAGTGAAATCTCTAGAAAGACAAATATTTAGGAACGGAAGGAGTAGATTCACCAT
ATGAAAATAATACGAGTGAATAGTCATCAAAATTCACAGTACTACCACCATCTTATAGAT
CCATACCATTTACAGAAATATTATGGTACAAACTTCAATAGTGCATGCTGTTGTTTATAA
ACTGTCAGAAGTGGCCCCTTTTTGGGACAGGAAAGGGTGATTGCTAAGAGAGGGTGGCCA
TGTACTAGAAAATATGGTAGTACAGATGCTCCCATCCAAGAATAAGATTGCATAGCATCC
AGTATTTATCTAGTCATTCTGTGCATACATGTTTTCACAATCATGGAAAACAACTGAACA
TGACGTGTATCAAGAGGTTTACCTGCCATACAAGTCACAGAGCTCTGTTTTGAAGGCTGC
ATCTTGTGTACTAACTCCATATCTAAAAACAAAATGAGAGAAGGATAAGATAATGCAGAA
AGAGCAATGCATCCAATACTTCAATGCAAGTTCACATCACCCAAAAAAAAGGTATCTTCC
TATCTTACATGATTAATTAACGATAGCCCCAATTATATATTTCATCTTTTACAGAAAAGC
ATACACCACAACGTTGCTAGTGCCCCTAACAAGTTTGGAGTTTCAAAAGTAAATGGATTT
GCACAAACCACATTTCAAGCCTAAATTTGATATACAAGAAAAAACGAGCACAACAACACG
TTGAGATGATCAAATAACTAGGAGTATAATCTATTTCAAAAAATAATACTTATATAGCTG
ATATAAACGACGCAAGCATACAACGAAGGCAGCAACTACACAGAGGCAATCCAAACTCAC
TTGTTCGCGATGGCCTCCACCTCGCTGGCCTCCAGCTTGGTGGGGTCGTCGTGGCCGGCG
ACGTAGTTGTGCAACCCGACAGCGGCGACCTCCGGCACCACAGAGTTCACCGCGACGGCA
GCCGCGACGCTGGCCCCGCCGAGCACGGCCGCGCCCGCGAACGCCGCGGCCCGGGAGCC
