Contig Data
morexGenes
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Map Locations of contig_400822 (3007 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_400822

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55580 1 1024 bp AK353559 Available Available None





CDS Structure of MLOC_55580






Contig Sequence (3007 bp)

>contig_400822 3007 assembly3_WGSMorex_rbca.fasta
CATGTTTTCAGTTGTAACCCACAGAATCAATCGCCTGTTCTTTTGTTGTACAATAGGTTG
GCCTTATTGCTGTAAACGATGGGATTATCCTTCGCAACCATATTTCACGGATTCTTCAAC
GCCACTTCAGAGGAAAACCGTATTATGTTGATCTCATTGATTTGTTCAATGAGGTAACCA
TATCCTCTGACATACATATACATCCACACCAAATATACTTTCTACTTCTTACAACTGTCT
GATACTCTAATTTCTTTGTCAAGGTTGAGTTCAAGACAGCTTCAGGGCAGTTGTTGGATC
TTATCACTACTCACGAGGGAGAAAAGGATCTCACAAAATATAACTTGAATGTGTAAGTTC
ATGTTGCAGTAGCTTCTGCACACGTAGTTTCCTTGCATGGTTTACCTAGTCTATATTTTT
GAAAATTGATGCTGTTGTTTTTTAATACGATAATTCGTGTTCCTTAGCCGGTGTTTGCAT
TATGTCTTTAGTGCTGTTGATGATTTCTTTAATGTTTGGCACTTTGCACAGTCACCGGCG
CATTGTGCAATACAAGACAGCGTACTATTCATTTTATCTTCCGGTAAGAGTTAGCACTGT
AGATGAATTATTAGTATAGTTGGTAACTGTGAGGTAGATGCAAGTACTAATAGTATTCTA
CGTTTCTACTTTGCCCAAGGTTGCATGTGCATTGCTGCTGTCGGGTGAGAATTTGGATAA
CTTCGGCGATGTAAAGAACATTCTTGTTGAAATGGGAACATACTTTCAAGTCCAGGTAAA
TCTCTTTCTTTGGAAAAGAAAAGTAGTTAGTTAATATCTACTCGCTCCGTCCCGAATTAC
TTGTCGTAGAAATGGATGTATCTAGACGTATTTTTAGTTCTTGATACATCCATTTCTGCG
ATGAGTAATTCGGGACGGAGGGAGTAGTATTTTATTGCCTCTGATTTAGTACTTTTGCAG
GATGATTATCTAGATTGTTTTGGAGATCCTGAATCTATTGGCAAGGTTAGTGTGTTTGTA
CTTGTTTTAGCAACTTGAATGGGTAGAACTAACACGTTGATTGCAGTCAAGGCTTGTTCA
CATTCTGATTTCTGATTTCATCTTTACGGACTCCTATGGCAGATTGGAACTGACATTGAA
GACTACAAGTGTTCCTGGTTAGTTGTGCAAGCTCTTGACCATGCAGATGAGAGCCAAAAG
CGCATTCTACTTGTGAGTGCTATTTAGTTATTAATACTTCTTACCAACCTAAAGGCACTC
CCTGAGCCATTAATTTGTGGCCGACAGGAAAATTATGGAAAGTCAGATCCAGAGTCTGTT
GCAAAAGTGAAGGATCTGTATAAAGAACTTGATCTGGAGGTCTGTCTTCAACTCTTCATT
ACTCTCTGTATTCTTCACATATCATCATCTCTTAATAGCCCACTGCACTCTTCATCACTC
TCTGTATTCTTCACTTATCATCATCTCTTAATAGCCCACTGCGGATATCATGCATATCAT
TATTTAGTATAAATGATTTAGCATCGCTAATATACTGATTATAACAAAACCCTACACTTG
GCTGGTGCTCATTTGGTTGAAGATGCCTTAAACAGTATCCAAACCGAGGCATGTTCGCTT
AGCCAGCACTCTATTTCAATTGACACACTCTTCTCATTCTTATACTCCAGACGGCATTTC
ACAAGTTTGAGCGTGAGAGCTACAATAAGCTGATCACCGACATTGAGGCCCAGCCAAGCA
AAGCTGTTCAGAAAGTTTTGATGTCCTTCTTGGAGAAGATCTACAAGAGGCAGAAGTAGA
GCTAAGCTTGTGGACAAATTAGTAACTTGTTCTATGTTCTTCTGCGTGTGATGGTCATCT
TATTTCAGTACTGTACAGTACATCATGGTATTATTCCTTCCAACAGTAAATATTTGGGCC
CTGTTTGGATCACCAATTCTCTTTCAAATACACTTGTAAAAAATACACACCTCCGTCGGT
TGTTTCACTTCTGGGTGGAATTTCCAGAGCGGTCAGTAAGTTACAGGTGTAAGCTATACA
CCTTCATATTGAAATACATTCAATCCAAGCACGGCCTTAAGCTGCGTTTGGAATGTTGTT
TTTCTGCAACTCTTGTAACATTTTACCCATGTATTACTCCTGTAACATTTTACACCCGTA
TTATACCAGCCTCCAACCAAATAAATGCCATAGGATTGTATTTCCATTCCGCTTTCCAGC
CTCCATTTGGAATGTTGTTTTTCTCCCACCCCTTTAACTTGGCTGGCATAGCCCAAACTT
TCAAAAGCATAAACTTTCAACAATAGCACAAACTTTTAGCAACACAGAGTGCACATACTT
TTCAACAGCACATACCGCACTTTCACACATATTGCATAGGTATAAAATGAGCTAATTTTT
TATTTATATAACAATACCACAACATAAAAAAGATAATATTTTTGCAATCATCCATTTGAA
CATAGTTCTGATAACTCATGGTGCTCAAAATCAACAGTTTAAATTACAAATTTATTGAGA
CATACTTGTCTCGTCTTGTCCGCTGCTACATAACCAAATTTAGGACTCATCCATTGTTCA
ATCATTGTGCATTTAGACATAAAGTATTTTAAGAAGATTATTGATTGCTTTAAGGACTTG
GGTAATCATAGAATCATGTGAAAGGACAACCTGAAAAGAAAAAAAAACATTAGCTATGTA
AGAACACTTTGTGTTCTGTGAAGGATGCCAACCAAGAATTGCATGTCCAGAATATTAGAT
GCACGGGTATGAAAAAGTATAGTTTGTTTCTGCATTTGCTCCTTTGGTTTTGTTTCTAGT
TGCTTCATCTGATGAGGCATTTTTATCAGTAAGTATGTGAAAGTGCGTTATATCGACNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAATTCCTTTTGAGGAAAC
TCCTCACTGATGACTAACTTGCAGCGAAAACAACAAAGGATCAGTGGTGCAAAGTATCAC
TACAACA