| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_40082
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55579 |
2 |
613 bp |
AK362431 |
Not available |
Available |
None |
CDS Structure of MLOC_55579
Contig Sequence (5528 bp)
>contig_40082 5528 assembly3_WGSMorex_rbca.fasta
TATATATATATATATATATATATATATGCTTTAGTACTCAAAGACTGCTTTTCTTTTTTT
ACTTAAACTGTACTCAAAAGATGCTAATCTAAAAACTATTCAAAGATGCAATTTCCATCT
TTCTAAGTTCAGAAGGGTATCATGTTCATATGTGACAAAGACACCTCACCTCCAAATAAT
CACATCCTTTGAACATGTGTGCTATGGACTTACGGCAGATCACAAAATGTTCACTGCCGC
TCAAGTTTGCCATCTCCAGTGTAATTGATCTGAATAAATACAATATGCTCAGACTTCTCA
GGATTTGGTCCAAGATGAAAACAAAACATTTTTTAGAGAACGGAAACTTAACCAATCACT
ATGCCAGGTACAAATCAAATTTCCCTAATGCCCATCCCACCTGGGCAACAATAAACCTTA
CAATGCAATAATATTAGGCAACAGTTCACAGCGCCTAATCCAATTTCTCAAGAAATATAC
TGTTATGAAATTAGCTTCCATGGCTTAGTGCCAATAATAACTTCCACAACTAATACCATG
GCCGCTTGGCTCCACTAGTCACAGTACCAGGTCAAGAAGCATAGATATATGTAGGCTGAG
ATATCAGTTTTGGGACTCTACCAATATAAACATAATATTTCATTTTGTAAATATCATTTT
CGCACATATCATCCGATTTGGACTGAAATATTGACCAATATGAGCGATATGTCCACTGAT
ATAGACTGGTATGTCGATGAATACAATTGTTTAGCGAAAAGCAGTGGAAAAATATTATAT
ACTGATAACTTCATTGTATTATGAAAGTCATGTATAATGTTTTGTAGAAACACATACATA
ACGTATTGTCTTTAATCTTAGAGTGAAAACTTTGTGAATCTGTCTTAAATAGTTTTTTAA
TTAACAAGTTAATAAACTAGGAATCTAAATTTATTATGCTAGACGACAAGAATAATGAAA
ACAAGAATAATGTAAATTTTGTTTTCACTAAAAAGATGTTTTTGAACAAGAATAATGAAA
ACAATCCAGATATATTTTCTCTGATATATCTACATATCGTCTGATATATAACCCGATATC
CGACATCCAATATGTTGAACCCAATATACGACATGTTGAACCCGGCGATTGTTGACGAGG
TTCAACCAAAACCTACATCCCCTGGGATCTCTTCTGTTCAGTGGGCACTCTTCCCTGGTA
CTATTTGATATCCTGACAAACTCGACACGCACGAGAGACTCTGGTCAGACCCCCTGAAAT
GGCAAGTCAGACCGCTCTCTGCGTGCTGAGTCCACCTCTCTCTCGGTTAGACACAGCATT
GTCCATATAATTGAGGCCCTGCCTACTTCGTGTTCGACTCAAACATGACTTTTAGGCTTT
AGCCCTGTATCAGCTATTACCACCACAAGTCCAACTGTAATGTAAGCAAACAAGCAATTG
CTGAAGAACCATACCTCAAATTGGTGCACCTCTCACCAATCACCACAAAGAGGTACGGGG
AGAACGAGGAGCACTTGAGCAGCGAGAGCTCGCGGAGGCTCTCCTTCGCAATAGCAGCGA
CTGCAGAGTCATTGAGTAGGCTGCAATTGACGGTGAGGTTGCGGAGCTTGCCATTACCGG
CAAGAATCCTATTCGCGATAGTATTCGTCGGCGTAAACGCCTGCAACATCGACCAAACCC
CAGGTTGAAGGGAGACCATATCTGGCGAGAGGCGGGGAGCGTGAGAGAGGGAGGAAGCTC
ACCGAGAGGTCTAGGGATTCTACGGAGGATAAGGCGGCACCGGCGGCGCCTCGGAGGGCG
CGGCAGGATGCTGCGGCGGAGCAGGCAGCCTCTAGCCCCACCCGGCCAACGACCTCCACC
AGGAGCGCTTCGGGGAGGATGTCGACCAGGCCTCCTCCGACGCTGCCGGAGGCCTCGCCA
CCGCCCTGGCCGTCGCCGGCGCCGCGAGGCTTCTTCTCCATAGCTCCTTCCCTGTTGCTT
TCAGACCTAGAGTCAGATGCGCGGAGACCGTCCCCGGATATACCACCACGTCTCGCGGGC
CCTCCGCGTGGGTATGACATCTGGGCCCGGAGTGAGAACACGCCACCGTCCTTCGTTTAA
AACTTTTATTAATCGGTACTGTTCTAGATGAGGAAATAAACCAATAAACCGGACCTGCTC
AACTCAAACGGATAGTGTTTTTGTTTTTTTTTTTGTTTGGATTGTTAGCCGATCTAGTCG
TATTTTTTTTTAAATGGATCGATACATGCATCCAACGAAAAATAAGTGAATAACAATACT
GTGATATTAAAATAATAGAAGAAAGACGGGTGGGGATCGGTCAGCGAATTAAATAAGCAG
ACACAACCACATGCGTACACCAAAAGGACGCGCGTGCATCCGCTTCGCGTCCGCGCCGAC
ACATTTCACTTCCAAATTTAAACCGGAAATGGATTGTCACGAACGCGAAGCGGACGCATT
TTGACAATGAATCCACGTGTTGGATGTTCACTTTTGTCGGCGTGGACCCAAACGGACGGC
TGCAGACGAAATGAGTGGTCCTATTGAAGTTGCTCTAAAGGTTAGCGCTAGTATCTGAGT
TTTCAAAACATTCCATGTGTGGTGGCTGCTCAATGAGTTGCAAAATGCATGATGTTATGG
ACATCCACATGTTTTTGTTAGCATGCCAATAAATGTGTGTGTGCATGCGTGTGTCCATGC
AAAATAAAACGGACAATGTCTCATCGATCTAAGCTATGGTCCATCCGATTGATTGTTGTA
GATCTTTACATAAACTTGACTCTGCTTCGATTTTTTGTCGCGCGTGGTCGGGTTTCCGTT
CGTGTCCGGTTGTCAGTCCATTCAAATCAAGCATGCTTTTTTTAGGCATATTTGTTGTTC
GGCCTTCGCTTTGTTGTTTGCTAGTCGTTTTCATTTTTTTGGCGTGTCATTTGTAGAAAC
GGAAGAGAAACGGGTGCTTCGTTTCCTATCTCTCTTATCATTTTTATTTTACGCCCGCCT
TTCTCCGTTCCTCCTCTTCCCATTCTTCTTTTGTCTTCCATTAGTGTTGTCCCGTGTAGG
ACAAAATCGACTGAGGACTTATTTGCTCTCGCGGAGTGAAGAGATGCCCCACAATGGCAA
TGAAGTGAGCTTTTGCCCCCCTCTTCTATCTTTTTATGGGTTCCTGGTTTGAAGTGTAAC
CTTAGCATTTCAAAAAGCACCCCTCTTCCCGCTATCGTTTTTTATTAGGCTTCTTTACAT
CCTCTATCTTCCTGTTTGTTTTTCGTTAGACCAAATCCATCGGTCGTTTAGATTGGTTTG
TGTTCTTGGGAGGGGTGGTAGTATGGGGGTGGTATAGTGTTTATTGAAAAATTAACAGGC
CCGCAATAGATGCATGGTTAGGACCATTTGGGAAATCTTTATTAAGAGGTTTCATTTCAA
ATCACTAGAAACCCTCTGTCTCCTTTTTTATCCGTAGAACCCTTTAATATTAAGTTGATT
TTTTTAAGTTTTCTTAAGTTGACGATGGTAGAATATAACAGAACATGTTTAAAGTTAACT
ATAGTGTTGGAAATATGCCCTATAGACAATAATAAATTAGTTAAGCTATTCATAATGGGG
AGTATCATATACTAGCATTATGCATATGATACTAGTGCATGATATTACCTTCATTGTGCA
TACTATCATAGAGTAGGATCATATATGGTGTTATTTATTACCATGCATGACTCAAAGTAG
CATAGCATTTAACATGATACAGTATCTACCTATGTTACTCTAACTCTCTCTCTTCTTTAA
TTCTCTGTCACATCAGCGTGTTTGCTATTAGATACCACCACTATGGCCAGCCTTATTATC
ATATTTCCTTGTTCATGATAAGTGTTTATCGTTCATGCTAGAATTTCATTATCCGGAAAC
TTAAATACATGTGTGGATACATAAACAACACAGTGTCCTTAGTGAGCCTCTACTAGACTA
GNNNNNNNATCAAAGATGGTTAAGGTTTCGTAACCATATATGTGAGTTGTCATTTGATAA
CGGGATCACATTATTATGAGAATAATGTGATGGAAAAGACCCAACTGTAAGCTTAGCATA
TTATCGTGTCTCTAAAGTTTAATTGCTAGAGCTTTCTTCATGTCAAGTATATGTTCCTTA
GACCATGAGATCTTGAAACTTCCTGACACCAAAAGAATGCTTAGTGTGTACCCAAACGTC
ACTTCATAATTGACTGATCATAAAGATGCTCTACATGTATCCTCGAAGGTGTTATGTTGG
GTTTGCATGGATAGAGATTGGGACTTGTCACTCCGTGTGACGGGGAGATATCTCTAGGCC
CTCTCAGTAATACAACATCATTAAGAGCTTGCAAGCAATGTGACTAATGAGTTTAGTCAC
GGGATCTTGTATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTGAACTAAGTAT
GGAGATATCGATGATTGAATCTCGGGCAAGTAATATATCGCTGCACAAAGGTTGTTGCAT
ACGAGCTTAACCGGATCCTCGACATCGTGGTTCAACCAATAAAGATCTTTGTGGAATATG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTGGTTATTGACCGAAGAGGAATCTCGG
GCATGTCTACATGATTCTCGAACCCATAGGTTCGCACGCTTAAAGTTCCATGACACTAGA
GTATTATTGGGATATGTACATTGGTGACCAATTGTTGTTCGAAGTCACAGATAAGTCCCA
CATGCTAGTCTAGAGTATTATTAGAATTTTTTGGAGGTAAAGATTTATATGTGGGAAGTT
CAAATTTTTCTACTGGAATAGTTTTGGGATTTTCCAGTATAGTACCGGGAGTGTCGAAAG
GGTTTCGGGGGTCTAAGGGGAGGGGGGTCCACACACCCCCTGGGGCTACATGGACTGTAG
GGGGGCATGGCCTAGTTGGGTCGAGGGCACCGGCCCCTAGGAGGCCCATGCGATTGGCCC
AAGGGGAAACCCTAGGGGTGGAGGCGCCTCCCCTTACTTGGGAGGCAAGCCTCCCTTAGG
GCGTTGCCCCCTCCCTTGGAGGAGGAACCAAGGGTTGCCCTCCCCCTCCCTCCCCCTATA
TAAAGGGTGAAGGATCACGGGGGACACACCAATTCCCTCTACCTTGGGGAAGCCATGTCT
CCCATCTTTCTCGTTTTCTTCCTTGTTTTTCATCGCGACAGTGCTTGGTGAAGCCCTGCC
GGTGTTGCACCACCACTCCCACCACGCCATCGTGCTAATTGTGATACCATCTACTTCTCC
ACCCTCGTTTGTTGGATCAAGGAGGAGGAGATGTCATCGAGCTACACATGTGCTGAACTT
GGAGGTGTCATCCATTCGGCGCTAGATCTTATTGGATCGCGAAGAGTATGACTACATCAA
CCACATCATATACGCTTTCGCTTAACGGTCTACAAGGGTACATAGACACACTCTCCCCTC
CCGTTGCTATGCATCTCCATAGATATACCTTGGGTGATCGTAGGAAAAATTCTTGTTTTC
CATGCTTT
