Map Locations of contig_39986 (7551 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_39986

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55460 1 1007 bp MLOC_55460.1 Available Available LOC_Os04g46200.1, FRAME:-1, EVALUE:2e-53, 13104.m04645 protein oleosin, putative, expressed





CDS Structure of MLOC_55460






Contig Sequence (7551 bp)

>contig_39986 7551 assembly3_WGSMorex_rbca.fasta
TTTTCACTTTTCTTTACAAGAAAAAAAAGAGCACATAACTTGATTTGAACTCAAGACCTC
ATGCTATAAGAAGGACCACAATAACCACCTTGGACATCATAGTGCTTGTGAATATTTACT
TTTTGTTTTATTTTCTTCTATTTGAATTTGCGTCTGGGCAGGCCCATTGTTGAATTGATC
CTTTTATCACTATCTTATTTTTCATTTTTCTATTCATTCTTTTTTACTTTTTCATTCCTT
TTGTTTTCTCAAAAAATGCTCACGCTTATTGCATTTTGTTTAAATTCTTAAAAAATGTTT
GCCTTTTAATTTTTTGCTCATAGATTAAAAATATTTGCATTTAAAAAATTTGTATAGATA
AGTCAAAAATAGTTTGTGTCTTTCAAAATTGCTCAGAATGTCTTAACACATACATATTTT
AAATAGAGCGAATTATTTTACTATTTTCTCACGGGAAAATGGTACAAAATGCATAAAATG
TTATAACTCAAATAATTTTATCATGGATACTTGGCATAGTGAAACTAGTGTGTGCAAAAA
AAATGGGTCCATTTTATTCATGTGAAGAAAAAGTGCATCCAGACTTGTCCTACCGGCCTA
TCCAAACCATCACTTTTTTTCACGTGCTATAATGATTATAACAAGGAGACGCGGCAATTC
TTTTTCTGACATCGAGTGCATTATCTGTGATTTTACATGTGAAAACACGCAAAAAAGTTT
TCGGACGTGACACGACGTGCGTTTGGTCACCGACTTAGTTCAAATTTTGTGTGGGACACT
TGGATGGACATTCACAGGTGGCTGCAAAAGTTGGATAGATTTCACGCATGTATGGATGTA
CATCATGTGCAACCAATGGGTGTCGGTACAGACGAAAAGGGTTATAACGCGACGAAGTTT
CTCCTCTTTATCAAACGACCCCAACTTTTTATCACATGCTCTAATGATCATCACAAGGAG
GCACGCCAATTATTTTTTATTTTCTGACATTTCGTGCATTTTTTATGATTTTTCATGCAA
AAACACGCAAAAATAGTTGTCGGGCATGACGCAACGTGCGTTTGATCACCGATTTGGTTC
AAAATTTGTGTGGGGCACTTGGATGGGCATTCACACTTAGCCGCAAAAGTTGGGTATATT
TCATGCATGTATGCATGTACATTATGTGTAAACCACGGATGTCGGTACGGGCGGAAGGAT
TGTCATAATGCGATGATGTTTCTCCTCTTCATCAAATGAAGCCAACTTTTTTTCACACGC
TTTAATGGTCATCACAAGGCGGCACATTAATTTTTTTTATTTTTTGACATTTTGTGCATT
TTCTATAATTTTCCATGAAAAACACGCAAGAACATTTGCCACACGTTAAACAATGTGCGT
TTAGTCACCGATTTCGTTCAAATTCTGGGTGGGACACTTGGATGGGCATACACACTTGGC
TGCAAAAGTTTGATAGATTTCATGCATGTATACATGTACATCATGTGCAAACCACGAGCG
TGGACGGAAGGATTGTCACAATACGATGATGTTTATTCTGTTCATCAAATGAAGCCAACT
TTTTTTCACACCCTCTACTCATCTTCGCAAGGAGGCACACATTTTTTTATTTTCCGACAT
TCTGTATATCTTCTATGATTTTTCATACGAAAACACGCAAAAATAGTTATCGGACGTGGC
GCGACGTGCCTTTGGTCACCGATTTTGTTCAACTTTTGTGAGGGACACTTGGATGGGCAT
TCACACATGGCTGCAAAAGCTGGGTACATTTCGTGCATGTATGCATGTATATCATGTGCA
AACCACGGGTGTCGGTACGGGCGGAAGGGGCGTTATAATGCGATGATGTTTCTCATCTTC
ATGAAACGGACTCAACTTTTTTTCACACGCTCTAATGATCATCACAAGGAGTCACGGCAT
TTTTTTATTTTTCGACATTTCGTGCATTTTCTATGATTTTTCATGCGAAAACACGCAACA
ACAATTGCCGTACGTGACGCAATGTGCGTTTGGTCACCGATTTCGTTTAAATTTTACGTG
GAACACTTTGATGGGCATTCACACTTGGCTGCAAAGGTTGGGTATATTTCGTGCATGTAT
GCGTGTACATCATATGCAAATCACGGATGTCGATACATGCGGAAGGAGTGTTATAATGTG
ATGATGTTTCTCCTCTTCATCAAACGAACCCAGCTTTTTTTCACGCGCTCTAATGATCAT
CACAAGGAGGCATGACAATTTTTTTTTATTTTCTAACATTCCGCGCATTTTCTATGATTT
TTCATGCGAAAACACGCAAGCACATTTGCCAGACGTGACGCGGTTTCGTTCAAATTTTGC
ATGAGACACTTGGATGGCTATTAACACGTGGCTGCAAAAGTTGGGTAGATTTCATGCATG
TATGCATTTACATCATGTGCAAACCACAAGTATCGGTACAGGCGGAAGGGTGTTATAATG
CGAATATGTTTGTCCTCTTCATCAAACGGACCTAACTTTTTAGGGGGTTTCATTAAACGC
ATGTTTCGTCATGTTTGGCATGTTGCATCATGTTGCAGCGTGATGCTAGTGTGTCAGAAT
TTTTTTGATCCATTATATTGATTTGGGCATCTTCTAAAGAAAATTAGAAAGAACATAAAA
GGGAAAACAAAAAATAATAAGAATGGAAAAGAAACAAAAAAGAACAATAAACCAATCACT
GATTGATATTATTGTTTTCATTTTTAACATAAGTTCGCAAAATTTAAAAGTGATCAATTT
TTTATGTGAAAATTTTCTATTTAATGAACATTTTTGTTTAAATGGATTTTTTTTTATTTA
ATAGATGTTCAAAATTTTAATTACACTGATGTGAGCATTTTCCTGTTTGACTGAATAAAA
TTTTAACATATATTTACTTTTCAAAAAATGAATATTTGTACTTTTGATTTTGTTTTTAAA
AAAACGAACAGTCTTTTAAATTTTCATTTTTTTTATAATTGTGAGCATTTCTGAAAAAGA
AGAAGGAAATGAAAACAAAGGACTGACGAAAGAGAAATAGTCATAAAAGGGCTGGTTTTT
AACAATGGACCAGCCCGACGGCTATTTGAAATGGAAGAAAACCTGAAAAAATAAAATAAG
CACATGGAATGAAAAGTTCTAGTTGGTTATTGTAGTTCTTAGTAAATTGAGAGGTCTAGA
TTAAATTGGTATAATAATGCATCATATATATAGAGGAGTGGGGGGGGGGTCGAGAAATCC
TCTTCTGAGCCCGAGCTCATGTGTTCCCTTTCACGAAAAAACTCTAAAACAATACTAAAT
AAATCCAAAAAATTCCATTTTTTTGGATGATAGATATTTTGATGCGTGAGGTTCGCTTCA
AATTTCAAGTTATTTGGACATCCGAGCAGCTCTCGGCAAAAAAGACAAAACCGGGTCAAA
ATATTATGTACAGTCAACCTTTTTCACAGACCCAAATTTTGTCTTTTTTATCGAAAGATG
CTCAGATGTTCAAATAACTTGAAATTTAAAACGAACCTCACGCATCAAAGTATCTACCAG
ACAAAAAAATGAATTTGTTTAGTATTTATTTTGATTTTTTCGTCGGCGCGGGTGCAACCG
AGAGGCGAAACGCCGCGTCGGGGGGTCATCATATTAATGCTAATATAAAGTTAAGATGCT
AATATAAAGTTAAGATATTTATTTTAAGATGGAAGAATACATCACAACAGAAGCGTAAAC
CTACCCCTCAAAATATGTCTATATACCTCTCTACAAGGACTTATATTGAAGTGCGTACAT
CACAACAGAACAGAGCAACAGAATATCCAGTCCCCCCTTGAAACAGTATCACTCCGAAAG
CGATACAACTACTAGAAACGTCGACAAGCGATTTGAGCTGTCTGACACAGGAGCCGGTTC
ACGGCCGAACGAGTTTTCCTAAAATATGTCTATATACATCTTTCTAATATTTTCCTAAAA
TATGTCTATATACATCTTTCTAATATGTCTATATACATTTTAAAAAAGACTTTACATTTA
GGTGCGTACATCAGAACAGAGCAACAGAATATTCAGTCCTCCCTTGAAATAGTATCACTC
CGAAAGCGATCCAACCTACTAGAAACATCGACAAGCATTTCCTTCATAAATTTCTTTGGA
AAATAATTGCTTCGTGTGTTCACTTTAACGAAAATAATTGCTTTGTGTGTTCACTTCAAC
GTTTCATAAACACTAGAGTATGTTATTGTCAATCTCTGCGATATCAGATCTCTTGTTAAC
AAATTAACCGTATGCTTGCAGAGTCACTTGGCAAGTCGGTATTAAGTTGATTTTAACATG
TAGAAAAACGCGAGAGGAGGACCTAGTCTCTTCTGCAAGTTGCATTTCAGTAGAGATGGA
TATACACACTCCGCCCGGACTCAGGCAATTTATTCACCACAAACTCAGACAGCATACATC
CAACATGCAGAACCTCTCCCGACTTCCGACCACGGAAACATACTGCTAGGGTACTACTGT
AGTAGGACAACAACTACTTGGCAACAAAAGTCTAAACACGCACTCGGTCGGATAACACAA
CAGGCGGTAAACGTCGTCGTCGTCGACTTGCTCGCGCGGCGGGCACGGCGGCGATTGAAC
GCGCGCAACCGTGCGCTACACCGTTCACCATCGACGCATCGGCCGCGCGTCGGAGCACGA
ACCTCTCTCTTCAAGCCCCCTGCGCCTGGTCGATGCGGGTCTGCGCGGCGTCCTTGATGT
CGCGGGCCTTGGTCGCGAGCCGCGCCTTGGCGTGGTCCAGCTGGTCGGCGCCCGGCGGGT
GCTTGCCGGTGAGGTACTTGTACATCCACGAGAACACGGACAGCGCAGCCACGCCCAGCC
CGCCGGACGTGACGAAGCCGGCGGACATGAGCGCCAGGGCGATGGCCGCCGGCACCAGCA
CCGGGCTGAAGATGACCAGCACGGGCGTCGCCACGGTGAGCGCGATGACGGTGCCGGCCA
GGATCAGCCCGGACAGCACAAGCAACCACCCGGCGGCCGTGGCCGCCGTCGCGGCCTTCA
GGGCGCACATCATCGCGGGCTGCTTCTGCTGGTCGTGGTGGTCGCCGCCGTAGCCGCCCT
GGCCACTGCGGTCGGCGAAGGCGCCGCCGCCGCCTAGGACGCCCCTGTCTCTGTGGTGTT
CAGCCGCCATGTGAAGGAAGGTGGTACGTGTGGAGGAGAGATGGGCACTACCAGAGCACG
GTCGCTGCGAGTGAAGGAAGCGGAGGGTAGGGGGGTGGGGTTATAGAGGAGCGCGGTGCA
TGGTATTACGTGGAGGCCGGAGCTGGAGCGGCCGCGTGGGACGCATGCGAGCACTCGTGT
CGGGCGCGCCGCGACACCTGTGCTGGCGTGGCCGGTGAGGTGTCGCCCTCGTCCGCCTGG
CGATACGCACGAGGTTGTGGGCTTGTGGCCGTTCGATTTGCCGCGTGTCGAACGGTCCCC
TGGGGAAGCATCAGTGGTGTTACCTGGCCAAAAGGGCCGGCCCTGCCGTGGACAGGCCTG
ACACAACCCGACTCGTCCAAATACGAATATTAGGTACCGTTCGATCTACGTGCGCAACTT
TTAGATCCAAATACTGTACGGAACCTATACGGATCGGTCTATTGGCATGTCAGGTCCGAT
TTTGAGTCAATTTTAGGCTGTTTTTGGGCAATTTTGATCTGTTGGTCTCTCTATATGTGT
GTATATGACTATTCCTCACCCAAGGGGTGAGGAATAGTTATTTTCACTTTCTTTTATTTT
CACATCAATGCACGGTAATTTTACATTCCATAAATTTTGTCTTATTTAATACATAAAAAA
AAGACCGTAATAAATAAATAATCACCATAAAAAATATGTTATCTAATGTAAAATTAGAAA
CACAAAAACATAGTGTAAAATATACATAAAACTATATTTTCTGGTCTTATGACCTATATT
TTTGTTTTCTTATGTCAAACCTTATGTAGTGAATCAATATAAATATAACTATTTTTATTT
TAAATGTAATTTATTTATGATTATTTCGGATGAAGAATAACTACATATAAAATAAAAAAT
GTAAACGGGTTGGTCCGCGTGCCCAGCCTTTAAGCCCAGACACAAACCAGGCAAAGGGCG
GTGCCGACGAAGGCAACTTCCTCCTGCTGACACCGCATCGCCATGCTGGTAGATCCAAAG
TATCATATCCTTGCAATGGTCCTCCACCGAACGCACATCATAGCAGAGACATATGCGCGA
TGCCTCCACCGCAAGAACACCTCCCCGCTCTAGCTCGGCATCAAAAGCCGCCTCGCTAGC
GAAGTAGCAGGCGCGCACCATCCATTATATGGACGACATCATCTCCTCCTTGTACGATAT
TTTCACTGACTACTCCGACGACTCAAACGACGCCTACGCGGAGGGCTATAGCCACACGGG
TGACTGTCGTCTCCGTTTAGTATTTAGCTTATGTATCTTGAGGGTGTCCTATCCGGTGAT
GAAATTTTATTGCTTTGTTCAAGGAAATGCGATGACTTATGTATGGATAATCTTATGTCC
GTTATGTTTGCAATGTGGATCTACGTAGTAGTTTCTCTTTACGTTGCATAGGTAATATGG
ATTTCAGGACCGGATATGAGGGGGGCGGCTATGCACACATAGAGATGAGGAATGACCAGT
CAATGTTCACAAACGCATTCGCTAGCGTTTAGGCGATTTTGCCAAATCCGACAAACAATG
ATCCTCCGTAAAAATACAAGTATCAAAGAGCAACCAAGCAAACAAAAAAAGGATAAAATA
AAGAAGTAGCAATGAGACTTGTGGCATAAAATCAAACATAAAGAACAAATCTTAGCCTAA
CAATAGAAAACAATAAACGGGCCAAGCCCATAACTCAAAAAATAGAATAAAAACATAACA
CGACATAGGCCCAAAATCCCAACAACTGGCAAAAAAGAAAGGATGAATGGGTAAGTTTCT
ACTCGAGATATGTGCGAGTGATTTTTTGTCCAGATTTTTTCAAAACATAGAAACATTTTT
TTGTATGTATTAAAAAGGGGGTATTACCGAAACACGTGGTTGTTCTAATACGTTGCCAAA
CAATACTTTGCAATTATTCAACTACTACCGAAATTTGGATAGAAGTGTACATTCTTTTAT
ATTAGATAGGAAAAATGTTTTTCTATCTAAAATATTAGATTTTCTTTGTTGATTTATTTA
TTTGTATATGCACTTTATGAAACTGACACACCATTCGGTTGATATCATTTAGCAAAATAA
AATACAACATATGCATCCATCTTTCAGCTCAATAATTTCACGTGTACAGTTCTACGGTAG
CCATCGACTGTGAGTATTTATAGTAGTCTTTCTAGCCATCAAAATCAATAGTTTATTTAT
ACTTTACCATTAAGTAGATGGTGATCCAACAGCCGATTAGGCCTTTTCCCTAGGGATCTA
ACAATTGCTTAGGGTGGGTTTGGTTGCAAAGGGATTTTCAAAGTATTTCAAGAATACAAC
AGTGTTTGGTTCTAGTTAAAGTTGCATATTACTCCCTCCGTTCCTTAATAT