| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_39871
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_55337 |
4 |
6168 bp |
MLOC_55337.1 |
Available |
Available |
LOC_Os02g07160.1, FRAME:+3, EVALUE:0.0, 13102.m00807 protein glyoxalase family protein, putative, expressed |
| MLOC_55338 |
2 |
5847 bp |
MLOC_55338.1 |
Available |
Available |
LOC_Os02g07160.1, FRAME:+3, EVALUE:2e-137, 13102.m00807 protein glyoxalase family protein, putative, expressed |
CDS Structure of MLOC_55337
CDS Structure of MLOC_55338
Contig Sequence (10731 bp)
>contig_39871 10731 assembly3_WGSMorex_rbca.fasta
GCTCCGAGAGCACTGAGACGTAGGGTCGTTACCTCCACCGCAGAGGGGCCTNNNNNNNNN
CAACCTTGCCGTAGCTAGGACTCTGTCCATCTCATACGTACCCTACACATCTACTGTCAG
GCTTATACCAACGACACGCGGTATTTAGTAAAATAGGCATATCTCCCTCATACGAAGACC
GTTTTGACTCCATGAGTACTAAAATTCAAGCTATCAACGAGCTGCTTCTAAATAGTTCAT
TATGCTAGTTCATTATTATCACTTCCAAATCAGCTTCCAAATAGTACCTTTTGCCCTCCG
AAGTTCGCAAACACAATTTGTCATTATTTTTCAATTCAATTTTTGAATTTTTGACACCTC
ATACGAACTTGGAATTGAGTGATTTTATGTACATTGGAAAGCTTGAATGAGTAGCATTCT
TGAGAAAAAATATCAAAAATTTGACATATTATTTGCAAGAGAAAAGTTAGAGAGAGAATT
TGGTATATCATGTTTAACAATTATTTATCATCATTGTATTGACTATTATTGTGATCTTCA
CTTATACTATCTTGCCGTTCAAAGCTATTCATATCATCCATCAGTGTTACTTGTGCTACA
TCATGACTCCATTAATGTTCTAGACTCGCCTCTCTTGTACGATCTAGTCTCAAACCGAAA
AATAGTTGTATTCAGACATCTGCCCCCTTTCAATAGACATCTGCCCCCTTTCAATTGTCA
GACGGGTCTGATCCTCCTCTAGTCCCGTACTCCCTTCGTCCGGTGAAGAGTATCCGTTTA
GCCTTAAAATTTGTCCATAAAAAAGTGTACTTTTATCTTTTCAAATACATTTTAAAGTAC
ATAAAAAGTGTACTTTTATCTTTTCAAATACATTTTAAAGTAGAAAAAAATGATTCTCTC
TCATCACACGGTAATCAAGACCAATACATTCTACAGAGTCTCTTTAATTTATACGTGCAC
TTAGCTCATTGGAGGTTGCTTAATTTAAAGGGGCGTGCTACGCGTCAGCCGACGGATTTT
ATAAAATATCCGTCAGCTCGCGAGCCGTCAGATCTGTTGCAGATCGAGCGACAGAACAAC
TTCTTCACTTTTGCAACTTAGGCCCAGTTGTAGTTTTTCTGCAACTACGGTTTTGTTGCA
GATTTTTTTGCAACAAAGATCTTATTGTAATTTCTTTTTGCAACTGAAGTTCCGTTGCAA
TTTTTTTTTGTAATTGAGATTATGCTGCAGAAGGGTCGCGTTGTTGTACTATCTAATTTC
AAGGATTCAGATCCTGCAACAGAGCCGTTGTTGCGATGAGAAATTGCAACAACATGCTAG
TTGCAAAAACTTCTGATGATGATCATGAGCCACGTGGCGTGTAAAGAAGAGGACGGATGC
CAGCGTGCGATCCGCCGGATGATTTATAACGTTTCCCTAATTTAAAAGGAAAAAGATGAT
GGCTTGCACCTTTTCAATGAATTTTTTTTACTTCATTTTACAATTTGTTCTAAAATATTT
ATATATATACACTTTTTATCGGACTGAGGGAGTCCTCCCAGCTTATTTCTACCTGTACTT
ATTTTTTGGACCACTACCAACGGAAAGAATATGGACCTCGCTATATTTGTAGCTGTACTT
ACCTTTTGAAATAAATAATATTTCTAGCTGTATTTTTGTTTGTGAAATACAGTAGTAACA
TTTCTAGCTGTGCTTGGCTGTACGTTACCCTAGGCCAGTCAGCAAACCCATCCCCTCCAT
CACACTAGCTCGAGCCCCCACACCACCAAACGCCAAAAGACAAATCGCACCCGCCACCAC
TAAACCCCGAGCCCACGTGGCGCCATGTCCGCCCTTTATTACCCCCCACTTCTCCTGTAC
TCTAACTGATAACCCCGAGCCACTACCACACGCGACCAAGAAGCGAACGCACACCATGCC
GCCCACCCCCACCACCCCCGCGGCTACCGGCGCCGCCGCCGCGGTGACGCCGGAGCACGC
GCGACCGCACCGAATGGTCCGCTTCAACCCGCGCAGCGACCGCTTCCACACGCTCTCCTT
CCACCACGTCGAGTTCTGGTGCGCGGACGCCGCCTCCGCCGCCGGCCGCTTCGCGTTCGC
GCTCGGCGCGCCGCTCGCCGCCAGGTCCGACCTCTCCACGGGGAACTCCGCGCACGCCTC
CCAGCTGCTCCGCTCGGGCTCCCTCGCCTTCCTCTTCACCGCGCCCTACGCCAACGGCTG
CGACGCCGCCACCGCCTCCCTGCCCTCCTTCTCCGCCGACGCCGCGCGCCGGTTCTCCGC
CGACCACGGGATCGCGGTGCGCTCCGTAGCGCTGCGCGTCGCAGACGCCGCCGAGGCCTT
CCGCGCCAGCGTCGACGGGGGCGCGCGCCCGGCCTTCGCCCCCGCGGGCCTGGGCCGCGG
CTTCGGCTTCGCGGAGGTCGAGCTCTACGGCGACGTCGTGCTCCGCTTCGTCAGCCACCC
GGACGGCACGGACGTGCCCTTCTTGCCGGGGTTCGAGGGCGTGACCAACCCGGACGCCGT
GGACTACGGCCTGACGCGGTTCGACCACGTCGTCGGCAACGTCCCGGAGCTTGCCCCCGC
CGCAGCCTACATCGCCGGGTTCACGGGGTTCCACGAGTTCGCCGAGTTCACGGCGGAGGA
CGTGGGCACGACCGAGAGCGGGCTCAACTCGGTGGTGCTCGCCAACAACTCGGAGGGCGT
GCTGCTGCCGCTCAACGAGCCGGTGCACGGCACCAAGCGCCGGAGCCAGATACAGACGTT
CCTGGAACACCACGGCGGCCCGGGCGTGCAGCACATCGCGGTGGCCAGCAGTGACGTGCT
CAGGACGCTCAGGAAGATGCGTGCGCGCTCCGCCATGGGCGGCTTCGACTTCCTGCCACC
CCCGCTGCCGAAGTACTACGAAGGCGTGCGACGCCTTGCCGGGGATGTCCTCTCGGAGGC
GCAGATCAAGGAATGCCAGGAGCTGGGTGTGCTCGTCGATAGGGACGACCAAGGGGTGTT
GCTCCAAATCTTCACCAAGCCAGTAGGGGACAGGTAAAAACTAAAGACACAAGCTTTCTC
CACTTTGATTTTGGCTTATACATTACATGATCCATGTGTGATGCTGCAGAAAAGTACGAG
TATGAAAGTTGGTGTTAGGATACAGAGTTGAATCATAAGATAGTGAGTGCCATGATCCTA
TTGGAAGTATTTTAGTTCAAATGCATGATGCACCTTTATGAAGATTGCCAGAACTAAAAG
GGGAATAAAGTTCCCTGTGCATAGAGGAAAGCCAACGTATATTCCCAATTCGCGCCATAG
ATTAGCACAGGATTAGGTTCAGGAGGTAGTATCAGTTATGCTATAATTCAGTAATGTGAG
GTTCAGTGCTCTAATACATTCTAGCTGCATCTTTGCTCTACTCCCCGTGCTTCCAAATCT
AACTGCATCAGCTATTATGTTCAGGCCGACCTTGTTCCTGGAGATGATCCAGAGGATCGG
GTGCATGGAGAAGGACGAGAGAGGGGAAGAGTACCAGAAGGGTGGCTGCGGCGGGTTCGG
CAAAGGCAACTTCTCCGAGCTGTTCAAGTCCATTGAAGATTACGAGAAGTCCCTTGAAGC
CAAGCAATCTGCTGCAGTTCAGGGATCATAGGATAGAAGCTGGTCCTTGTATCATGGTCT
CATGGAGCAAAAGAAAACAATGTTGTTTGTAATATGCGTCGCACAATTATATCAATGTTA
TAATTGGTGAAGCTGAAGACAGATGTATCCTATGTATGATGGGTGTAATGGATGGTAGAG
GGGCTCACACATGAAGAAAATGTAGCGTTGACATTGTTGTACAATCTTGCTTGCAAGTAA
AATAAAGAACAGATTTTGAGTTCTGCATCACATGGTGCGTGTGTAAGGTATCATATCTTG
GTTTTGGTCATACGAGCCATATGATAGTGAAGGTCATGATGCATCTCTATGAAGATTGTG
ACAACTTAAAAGGGGAATAAAGCTCCTCGAATAGTATAACAGGCCAAAGAATCCAACTTC
ACAATCCGTGGCATGGTGTACTTTCATATTAGCATAGAAAGGTATCTGATTTTATTCTAT
TTTGGTTCAGCAGATAGTACCACCAGTATTTATGCTATAATTCAACAACTCGAGGTTCAG
TGCCCTACTGACTTCAGACAGTATCTTTGCTATGTTTATCTACTCTCTGTGATTCCAAAT
CTAACTGCATCAAGCTATTATATTATGTTCAGGCCAACCTTGTTGTTGGAGATGATCCAG
AGGATCGGGTGCCTGGAGAAGGACGAGATTGGGCAAGAGTACCAGAATGGTAGCTCCGGC
GGGTGCAACTTCTCCGGGCTGTTGAGATCTGCTCCCTCTGTAAACAAATGTAAAGGGAGT
ATTAAGGAGGATGAGAAATCCCTTGAAGCCAAGCAATTCGCGGTTGCATCCTAGGATAGA
ATCTGGAGCTGGAGCAACAGATCCAGTACTTTGTATCATGGAGCAAAAGAAAAGAATATT
CTACTTCCTCCGTTTCTAAATATAAGTCTTTTAAAAGATTTTACTAGTGGTCTATATACG
AAGCAAAATGAATGAATTTACATTCTAAAATATGTCTATATACAATGTATGTAGTTTTCT
AGTGAAACCTCTAGAAAGACTTATATTTAGGAATGGAAGGAGCATGTAATATGCCACGCA
CAACTATATCAATGTATCCTATTTATACTGAGTGTGATACTGTGATATGTGGTAGAGAGG
GTTCACACATGAATATAATGTACTATTGGCATTTTTGTACAATCTTCCTTGCAAGTAAAA
TAAAGAATCATACTGGGCATCTGTCCTCGGGATGCTCGCAATTTTCTGGTGCCATTTTTC
TTTGGAAAGAGCCATTTGTCCTGTACTTCTCCGAGCTAAAACCGTGAGCAGAGAACTACA
CCAAACTGCATTCAGCAACCTGAAAGAAGCAGAGGAATATCAGAATAGGGTTATCCAGAC
ATATAACTGGGTGTATCATGCATCATGTTATTCACAAAATGGACCTGCGAAATGTCTGGT
CTATTTAAACCTCTGCTTGTTGCAGGATAATTGAATAAACTGCTCAATAGTTTATCATGT
CCTTGTTAGGAGACATCACTCAAGTGAATGTTCAATTGCAGTGCACAAAGCCATCGATCA
ACCATACGCCATGATGCTTTATACAGAGTAACATACATTTTTCTATTAACCGGTTAACTT
TTTTTTTCCGCAAAAAATAAGGACATACAGTATGTTTTAATGCATCCTACATCCGAATAA
TATGAAAGCATGAATCGTACATGTATCGTGAAGTTGAGCCCTTTGTTGCGTATGCTTGAA
GACATTGTACAACGAGAGAGATAAAAAGATATAGAAGCGAACCTCATTGTCAAGAGCAAA
ACAGCCTAGAGAACATGTAAGCATGGCAGCCCTGCAATGTGTCAAGCAGTGGTGCAGTTT
GTGATGCTTCAGAGACATCACGGTCCCTCCACTTCTGCATCATCTTGGCATCTGGCGCAG
CCTGATGCTGCAGCACCGAAGCAGCAAGCTGTCCGATCAAACTGAGCATCGTTGCTGCGG
AGATCACATCCATCATTGTCACAAACATGTCAGCGCGCTGCGTTGTCTCGCTGTCAAATT
CAACCAGTCCACATATCAACCTGAATATCGCCTGTGTTGTCTCGCTGTCAAATTCAACCA
GCCCACATATCAACCTGAATATCGGTGCATGGTGAAACGACACCACTCGTGGAACCGAGA
AATGTCCTTCGGAGATCCTGCAGCGACTAAATCTCAGTGAAGACAGACGCGGCCACCCTC
AACAGAGCTGAGCCTTGCGACATGGACGCTGTCCTGCCGACCTCGTTCGTCAACGTAGGC
TCTAGTAGCTGATATAGCTTGACCCATCCCGCGGCGTCCGGAGACCTACTGGTGCAGTAC
ACGAATGGAAGCAGCAGGCTTCCAATGTTCATGTTCTCCAAGACCTGGACAATAAATTCA
AGCTGCTTCTTTGCTCTACTGCCCGTGATTCCAAATCTAACTGCATCAACTATTATGTTC
AGGCCAAGATTATTCCTGGAGATGATCCAAAGAATCGGGTGCATGGAGAAGGACAAGAGA
GAGGAAGAGTATCAGAAGGGTGGCTGTGGCAGGTTCGGCAAAGGCAACTTCTCTGAGCTG
TTCAAGTCCATTGAGGATTATGAGAAGTCCCTTGAAGCCAAGCAATCTGCTGCAGATCAG
GGATCCTAGGATAGAAGCTAAAGCTGGAGAAGCTGATCCAATGCTTTGTATCCTGGTCTC
ATGGAGCAAAAGCACAAAATGTTGTCTGTGATATGCGACGCGCAATTATATCCGTGTTAT
AATTGGTGAAGCTGAAGACATGCGTATCCTATGTATTATGAGTGTAACACAGATGGAAGA
AGGGCTCACACATGAACAAAATGTACTGTTGGCATTGTTGTACAATCTTGCTTGAAAGTA
AAATAAGAGAATAACTGATTTTGAGTTCTACATCACATGGTGCATGTGTATGGTGCATAA
AGGTATCAAACCTTGGTTATATACCGAATGCCGTGAATCCAAGAGTATCCAACTGAGACT
ATTTTCAGTCCATCCATGTATGATGCATCTTTATGAAAATTGTGACAGCTTTGAAGGGGA
ATAAAGCTGCTTGCATAGGCCCAACGTATCCAACTTCACAATTCGTGGCATGGTGTACTG
TATTTTAGCATAGAGTCATACATAATTGTTTGAAAAGGTTTTGATTCAGCAAATAGTACT
AGTATTCATGCCATAATTCAGTAACTTGAGGTTCAGTGCCCTACTTCAGACTGCATCTTT
GCTATCTTTTGTCTACTCTCGGAAAACGCCTGCGTGTGACTAATTAACTACTCGACCTGG
GGAAGTACGCGAAAGCATCACTAGCTTACACTCTGACCCGAGTAGCATGGGGCACGTGGA
ATCCCTTTTGAATCAGCAAGGCTGACTGGGCTTTCTCCTGCATCAAAGCGGATCAGCTCA
CCAAATTCGCCGACTTTTAGCAATGGCTCGTAATGCAGCATCTCTTCCACTACCAAACTT
TTTTTTGGAAGTAGCTAGATTCAAGCAAGCATCCTAGCAAAACGATCTTTTGACAATGGG
CTCTGCCCAACACTGGGACTGACTGACTTTATACAGAGATAGAAAAGGTCCAAATCTAAC
TGCATCAGCTACTATGTTCAGGCCAACCATGTTATGGAGATGATCCAAAGGATCGGGTGC
ATGGGGAAGGACAGGGCCGGGCAAGAGTACCAGAAGGGTGGCTGCGGCAGGATTGGCAAG
GGCAACTTCTCCGAGCTGTTCAGATCTATTGAGGTGTACGAGAAATCCCTTGAAGTCAAG
CGTTTTGCTGTTACATTTAGAATGGAATCTGGAGCTGGAGCAACAGATCCAGTACTTTGT
ATCATGGAGCAAAAGAAAACAATTTTCTTTGTAATATGCAATGCATAATTATATCAATGT
TGTAATTGGTGAAGCTGAAGACAGACGTATCATATGTATGATGAGTGTAATAGATGGCAG
AGAGGGCTCACACATGAACACAATGTGCTATTGGCATTTTTGTACAATCTTGCTTGCAAG
TAAAATAAAGAATCATACTGGGCGTCTATCCTCAGGATGCTTGAAATCTTCTGATGCCAT
TGTTGTTTAGGAAAGCCAGTGGTCCTGTACTTCTCTGAGTTACAACTGTGAGCAGAACTA
CAGCAAATTGCATTCAGCAACCTGAAAGAAGCAGAGGAATATCAGGCTAAGGTTATCCAG
ACATATAAGTGGGTCTATCATGCATCATGTTATCCACAAAATGGACCTGGGAAATGTCTG
GTCTATTTAAACATCTCCTTGTTACAGGATAATTGAATAAACTGCTCAATTGCTTATCAT
GTCCTTGTTAGGAGACAGCACTCAAGTGAATGTTAAATTGCAGTGCACAAAGTCATGGAT
CAACCATATGCCATGCTATAAAAGATGCTTTATACAGAGTAACATACATCTCCCTATGAA
CCAGTTAACTTATTTTTTCAGGAAATAAGGAGATATATTTCAATACATCAGACTAATACA
AAAGCACAACCGGTACATGTATCATGAAGTTGAGCCCTGTGTCGTGTATGCTTGGAGACA
TTGTACAACAAAAGAGATAGAAAGATATGGAAGTGAACCTCGCTGTTAGGAGCAAAACAG
CCTAGAGAACATGTAAGCATGGCAGCCTTGCAACGCGTCAAGCAGTGGTGCAGTCTGTGA
TGCTTCAGAGACATCACGGTCCCTCCACTTTTGCAGCATCTTCTCGGCATCTGGCGCAAC
CTGGTGCTGCAGAACCGAAGCAGCAAGCGGTCCGATCAAATTGAGCCTCGTTGCGGCGGA
GATCACATCCCTCATTGCGACAAACATGTAAGCGCGCTGCGTTGTCTCGCTGTCAAATCC
AACCAGCCCACATATCAACCCGAATATCGGGGCATGGTGAAACGACACGCTCGTGGAACC
GAGAAATGTCCTTCGGAGATCCTGCAGCGACTGGATCTCAGTGAAGACAGACGCGGCCAC
CCTCAACAGAGCCGAGCCTTGCGACGTCGACGCCTTCCTGCCGACCTCGTTTGTCAGCGT
AGCATCCAGCAGCTGATCTAGCTTGACCCATGCCGCAGCGTCAGGAGACCTACCGGCGCA
ATACACGAATGGAAGCAGCAGACTTCCAATGTTGTCCAAGACCTGGATGAGGAATAGCCA
CAGGTCTTCGGGGTTGTTCACTATGCGCGATTGCATAGCAGCTTCCAGGCCGTAGGAGTG
TGCAAAACCTCCTGTAGGGAGAATGGAGTCCAGTAGCTGCCACTGGCTCCAGAACAGTTG
CTGATTCATGCTCGACGACGCAGCGGCAGGAACTTGACTGATGGCAGAATCCTCTGCATC
ATCCAGTCTCATTTTCTTCAAAGCCGAGTGATCCCGCTCCATGAGTATCAAGATGGGTCG
ATGGACCACTCCTCAGTGCTGAGAAATGAGAAGAGCAAACTCTTGTAAACCATAGAGAAC
AGCATAAAGATCCCCAAAACGCAGGAAAATTTACACGCAAAAACATCAGCCCGATCTTGA
TTTTTTTGCATCTTAGGTGCGACGAATTCGTCAAACTGGTCGTTCAGAGGTCCAAAAAAA
ATCCCGACTTGGCATTCTGTCGAATACCCCGACGGCGTCGATCAGAAGCTAGAGCGCTGG
GACTTTCGCCTACAGAATTGAAGAGCGGGGCGAAATTAGGTGTATACCTTTCGGCGTCGA
TGCTCCGGGAACGAACTCGCGGATGGCTTTATCCTTGCGGCGATGAACCCATTGACGCCG
GTCCGCGCAGGCACTCGTCGAACACTCGGTGATCGCTTCGGGGGTGGATGAGGCAGTTTG
AGAGAGTGGTCAGGGGTCAACGAGGAGAGGTGGATTCATGGTTCTGTTTTGTTTGTACTC
CCTCCCTTCGGTTTGGTTGGAGATTCCACTAAAACTGTATGGATGGATGTATAGGGATAT
ATTTTAAAGTATGAATTATTTATTTTATTCTATATATAATTGATAGTAAAAAAAAATTAA
AGGAATAGAGAGAGTACTATTCCCTCTGTACCATAATATTTGTTGTTGGAGAGAACTAGT
CTAGTTCTCTCCAACAACAAGTATTTAGAAACAAAGAAAGTAGATAATGCCCCGTTGCTG
CGGGAATTGGTTCACTATATTTTTATGAGATTTGATGTTTGAAACATGAATATTTCGTCG
GTAATATGAGAAGTAAAACTAAAAAATAAACATGATTGATTTCATTTAATTATTGAGGTT
AAGTACATACATGTCTATTTAGTTACTCCTTCCATCTTAGTTTACAAATCTTACACGTGT
ATCTAGATTGTTGATTTAACTTATATAAAATAAATTATTTAACATAAAAATTATATCATT
AAAAAATAAAACATCTAGAAAATGTAATAATATTATTTTTTAAATATATGTCTTTTATTA
AGTTGATTAAATTAACGACTTAGGTACATGTGTAAGACTTATAAACTAAGATGAAGAGAG
TATGTAGGATATGATAGTACACCACACATTGTTGCAGTATTCTGAGTTGACATTAAGGGT
CCTACTGGATTATCAATTCTTGATTGCCGAGAGGTTAGATCACCGTGTCAACTATGACAT
GGTGCACTTTATTTTTTTGAACAATCAGAGGGGGGAGAGAGTCTCCACCTGTATATATTA
CTCAAAGGCCCGAGGGCAGGTTACATCATAGATTACAACGAGAGGACAGGTATAGCCGCC
AAGACATGGCAGCCTCCCTACTAACAGAGTCCTTAAATCTTAGGACCCAAAGCGTAAAGT
CCGAAATGATGTTCCGAAGAGTAATTTGTGGTGTGTGTAGCTCGTTTTGAAAGACCTGAG
CGTTCCTGGAGTCCCACAACTTCCAGAGAATGGCGAGGGCAACGGTAGGCCAGATGTTGA
TGTCGAGGCCGACCGGTGTCGTAGTCTCCCAAAGGCGGTCTATGGAGTGAGGGGGCTGCA
ACCCTAGGAGTGCCCATACCTGAACCGCGTATGGGCAAATGATGGAGATGTGTAATGCGT
CCTCATGAGAGATAGCGCACCGTGGACAGTCCGGATGAGAGGTAATGGTCTTATGATGTA
GGTTTGCCATCGTGCTCAACCTGTCATGGCAGAGAAGCCAGCCGAAGATTC
