Contig Data
morexGenes
Links



Map Locations of contig_39691 (7576 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_39691

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55137 3 2524 bp MLOC_55137.2 Available Available LOC_Os07g48310.2, FRAME:-3, EVALUE:0.0, 13107.m05165 protein inactive receptor kinase At2g26730 precursor, putative, expressed





CDS Structure of MLOC_55137






Contig Sequence (7576 bp)

>contig_39691 7576 assembly3_WGSMorex_rbca.fasta
AGTCTAGATCCCGCCAGGAGTAATGACCGCCGACGGGTGTGTCCGGGGCGTTACATATTG
AGACCTGAGTTTCCATACCTTAGTGCCATAGGAGCACTAATGTACCTTGCAAATTGTACT
AGACCAAACATTGTCTTTGCTGTAAATTTACTGAGTCGACATAGTGCAACTCCAACAAAG
CGCCGTTGGATGGGAGTAAAGAATATCTTCAGATATTTACATGGTACTAAAGATCTTCAT
TTATTCTATCAAAAAAATCAAAACATGGCTTTGATTGGTTATACTAACTTTGAATATCTT
TCTGATCCCCATAATGCCACACAAACAGGGTTTATATTTTTATATGGTGCAATTGCTATT
TTATGAAAGTGAAATAAACAGACTTTGGTAGGCTAACCTCTCTGAATTAAACTGCATTAT
TTAAAGCCTCACAAGAGTGTGTATGACTCCACATAGTGATAAATCATATTCAGACATCAT
GTGGTATCGGTTCATTAAAATAACCTACCATTATAGAAGATAATGTTGCATGTGTTGCTC
AAATGCATATTGGATATATTAAAAGTAATATCACAAAACATATTTCTCAAAAAATATTCT
TTCCTCACGAATTACTGAAAGATGGAGAAATTAATATTTTGCAAATAAAATCCTGTGACA
ATCTTGCAGATTTGTTCACTAAGTCTTTACGAGCAGCAACATTTCAAAAGTGCATTCATG
GCATTGGTATGAGACAACTGCGGAATTTGCAAAGTTCAGGGAGGAGAAAACTCCTAGAAT
TAAAACTTATTTATTATTATCCTCTGTTGATAAATAAACTGTACTCTTTCCTTATGAGTT
TTCCAACAGATTCCTCATACATGTTTAAATGAGAAAATTAATTATACTAACACTATATAT
CAGATTCCTATTTGTTCTTCTTATATTTTTCCACAAGGTTTTTAGGAAACATAGACAATA
TAAGATCAAGGATTCTTAAAGTTACAAGACAATCAAGAAAATGCAACATTTTTCAACACT
CAAGACGATAAAGATCACTAACAAAGTTGTCCCAGGGAGTGTTAAGAATAAAATAGCTTT
AGATTTAGGCTAATTAGACGATTAACAGATCCCTTATAATATTCTATCTAGCAGTTAAAA
CGTTGGCTTTGTCCATATGATGTCCTCCATCCGTTTTTCAATATAAGTTTTTTTAGAGGC
TTCATTAGGGAACTACTTATTGATGTATGTAGACATATTTTAGAGTATAGATCCATTTAT
TTTGTTCTGTATATAGTCTTCTTATGAAATATCTAAAAAGTCTTATATTTAGGATCGGAG
GAAGTATATCTCAAACCGTCGCCGTAACCGACACTATAAACATCAATATCTGGATGAATC
AATCAATAAAGATCACTCCCTTCACTTTAATCTTTCTTGTTTCTCTTCAAGAATGAGCTA
ACCCTCGAACCAGTGTTGTTACTCCCCCCAAAGAAAAAATATCAAATTCTTTACCCAAAG
GTAAAGGCAGGCAGCACTTGCCACCATGACGATTTGGCACAGCAATGAAACAAATACAGC
AATTCAATCAATCTCCCAATGAAAAGCTCTACACTTGCCAAGATTACAGTCTCAATGCAA
ATTGTTCGATCCAGTGAGGTCGCACCTGATGATGCCAGCCGCGCTGGCATGGCGCATGAA
CTCAAATCACAAATCAGCTAAATATAAACCTAATGATCCGCTGACAGGAAAGCCGGCGAG
GGGAATCCCATCCTATACCGACGGGGGGATGGACTCCTTGAACTTCTCGTCGGAGGAGGC
GCGGCTCTCCGAGGCGGAGTGCCGGAGCCCCTCGATCATCCGGATCACCTCCTCCATCGC
CGGGCGCCGCTCCGGTGGGCCTGACGTGCATGCCATCGCCACCTGGAGCATCTGGACCAG
CTCCTCCTCGATGTTCTGGTGCTTCATCAGCTCGATGTCGAACACCTCCGCCGTCCACTC
CTCCCGGACCACCGAGTGCACCCACCTCGGGAGGTCCACCACGTCGTCGTTCCCCTGCGA
CTGGAGCGGCGCCTTCCCCGTCAGCATCTCCATGAGGAGGACACCGAAGCAGTACACGTC
CGACTTCTGCGTGCTCTTCCGGTTCTCGATGGTCTCCGGGGCACGGTAGCCGACGACGAC
GCGAGATGCGCTGACGGGAGGACTCATCAGAGAACTCAAACCATAGTCTGAGACGTACGG
ATTGTGATCCTGGTCGACGAGGACATTGGTTGACTTGATGTTGCCGTGGGTGAGCTTTGC
GCCACCTTCTGAATGGATGTGTGCAATGCCATATGCTGTTCCGAGTATGATCTTCACCCT
GGCGTTCCAGTCTAATGGCGTCTTCTCAGCAACACCTCTGATGCCTGTTGATCAGCAATT
TGGTAAGAGATACTATCAGTTCAGTAGTTAACATTATTGTCTAACACAAGTCATGTTTCT
TTGCATGATTTTTTATTATTAAGCTATAGAAAAGAAAGATCAATGCAGCTTCAGGCAGGA
AATGTGCAGAAATATACTCAAGCCTTACTTTTCAGACCTATTGCAAAATAAGGTTCCTAA
CATCATGTAAATGTCATAATTTTAGATGCTAACAATCAGCCATGGCATGGATATAGCAAG
TTCTGTACTTCGAAAGGCAACAATTACTTTGACATTTGAGCAATGTTGGGCCCTTGTTAT
GTTCTCTTGTCAGCATTGCACAGTTAACAACTTGTAAAACATCATAAAGAAATATTAGGA
GTTAAAACACATACCGTGCAACATGCCAGAAAAGCTGCCGGTGGCAATGTAATCATAGAC
GACAAGCTTCTCATCCTTGGAATAGTAGTAAGCACGAAGCTGGACTAGGTTTGCATGTTT
ACCCAACCTCCCAACGAGCTCCATCTGCTGCTCAAACTCCCTTTTCCCTGCCACTACATC
TTTCAGTCTCTTGACAACCACAACAGTGCCATCCTCGAGTATAGCCTTGTAGGCAGTCCC
ATAGCTCCCCTTGCCAAGGACTTCTGCAGAAGCTCTTAGTAGATCCTCCAAGTCAAAGTT
GTAGGTGCAACCGTCCAAGAAAACCAACTTGTTCTTCTCTGAAGTTTGGACACCACTACT
GAATTCCTGCTTCGGCTTCTCACTCCTGACACCAGTCCCCTTGTAGTCGACACCGGCCTC
TTTCTTGCCCTTCCTCTTTGAAAGGCACACAGCCAACACAACCGCAACAAGCATCAGTAC
CGCAAATCCCCCGACAGCAACTGCGATTATGAACCCGATGCTCAGTTTCCTGTCGTGATG
CGCAGGCGATGGAGAAGATGGTGTTGAAGGCAATTCTGTGGAGGGTGTTGGTGTTGGAAA
TGAGCAATTATCTAATGGCAGCCCGCATAGTTCAGGGTTCCCCAAGAATGAACTATCTGG
GAACATTTGGAGCGAGCGAGGAATTGAGCCTTTCAACTCATTATTACTCAGATTTAACAG
TCTCAGGCTTGGAAGCTTCAGGTCAGGAATGGTTCCGGAGAGAGAATTTTCTTGTAAATT
TAGGAGATATAACTGGGTAAGGTTTTGTAAGCTTGTAGGAATTTCTCCGGTGAAGGAATT
ATAGGAAAGCTCCACTACACTAAGGTTAGGACTGAAAAAGGAAGGCAAACCTCCTGAAAG
TTTATTGTGCTGAAGGTATATGGAACGTAAAGAAGGAAGTGAGGCCACATCAGATGGAAG
GCTTCCAGATAGAAGGTTGGATCGCAGGCTCAGAACTTGGAGAGAATCGAGCTTGCCAAG
AGTCTTTGGAGGGATTGCTCCGATGAGGCCAGCACCTGGCACCCTCAACTCAGATATGTG
TGACTGGTTTCCTGAGCATTTAACACCATGCCATGAACACGGTGGTGTACCTTGACCCCA
GTTAAGCTTGTTGCCGCGGTAGACTGCAGAGGCGAAGTCAAGAAGGGCCTGGCTCTCAGA
GGCCAAATCTGCTACTGCCAGAGGGTTGAATAATGATAATAACAGATGTAGCGAGAGCAG
AAGACGGAAAAGGCCACTAAGACTGAGATGATCCATCTGATGAGTCGCCGAACGAGAGAA
CTAAATCAGCAGCACCTTCATTTGTTTACAGCAGACAAGCAACCAAACCTGACCAAATAA
AAGTGGACATTTAGTGGAAAAAAAAACCAGCATACTGACACTAAGCTTTAAAATGTACTC
CCTCCGTTCCTAAATATTTGTCTTTTTACAGATTTCACTACGGATTACATATGGACGTAT
ATAGACATAATTTAGAGTGTAAGTTCATTCATTTTGCTCCGTATATAGTCCATTGTTGAA
TTTTTAAAAAGACAAATATTTAGGAATAGAGGAAGTAGCTGCAAACAAGAGAAGTATGTC
ATCATAAGAGAAGAAACACAAATTGGCAATCAATGCACATATGTCTGCTAGGTGCCCCAA
AGGGCACACTGATGCATGCTATTATGTGAATTGCGCATGACTGTAAGTAAGTCAGCGCAA
TCAGCTTTCTTGTCCAGCAAATGACTCAACAGAGACAAGTCAGGGCACTTTAAAAAGGTG
AAATTCCCATCATTGTCTACAGATTTCATCATTCCAAACTAGTGTGACTTAATGCTTCCT
GTATAAATTGCAGATAGCGCACAGGCTGTTATCCTGCGAGGTCGATCAGTATGGACCAGC
AGCCAGACACTTTACTGAACTACCTATTCACTGGTGGCCTGGTTTTCTAGTGACAATGTA
AGAATACACACGCAGTCGAACATGAAAACAAGTCAAGGGACAGAAATTCCACCTTGGCGC
CCTTTAAAGTGTAAAGGCAGGAAAACATGGCCTAAAAATTGCAGGCAGAAAGCACTTCAA
GGGAAAGAATGAAAAAGAAAAGGCGGCATGATACGGTCAGCGTATAAAAGCCAAAAGCAT
CAACAAAAGCAGGGGGAAAGAGAATAACAGGAACAAAGCTGAACCCACAAAGATAAGCAC
ATCGCATCATGCATTTCGGTATTGCCACCACTAAGCTCAGTTGACAAACTACTGAAGCTC
AGGCACGAAACTCCGAGTCTCTGACAAAATGCAATGCAAGTAGTACCGACAGAAACTGAG
GCAACTATGCGATCAAGAAACCCTACATGTAGCAGAAACTTTGAGCACGCTTAGGAACAA
GATGGCGCAGCTTTAGCCTTGCCACGAAAGGTATCTGACCGCGCTAACTGCAGACATCTA
AGGCAGTGATCACTGGAGAAAGCTGCTTCGTCAGAGAAGCCACTAAACAAACAAAGGTCG
GCAATCACAAGGAACCCTGTCTGAAGGTTATGCAGCCTAATGGAGATGGAGATGTGGGAA
GCTGGCTGCTGCACATGGCAATGTGCTTGCAGGCTCACCACTCCATTGTTTACTGACTAC
AAGGCCTAGAGCAGTGCACAATTTGCTTCACCCCCACTTAAAGAGGGCCTGAGGAGAAGC
AATTTCTTAATCAGGGCCGGCGAATGAATAATACCCGGTGCTCCAGAGTCCAAGTCCAAG
CTGGCTGGCTCAGCACCCATAGCTCACACGTCTCCAGGTTCCAGCCCTTAAATAGTTAAA
TTACATGCATACATACGGCTCATGTGAAACCTTTACTGGTTGAGTCAATTCCAAGCCAGA
GCAGGTAACATGGTAGTACAAGGAATTAATGGCATGTGGGGGGTGCTACTGCCTGCTGCT
GGTCTGCTGGATCCACCATACGGCAGGAACAAGAACTGGGAGCTTAGCAAAGATCCAGTC
TTTGGCCAGTACAAGAAACAAAACTGAAGAAAAGAGAGCACTGCGATTTATGTAGAACTG
GAATTTATCTGTTTTCTTGGTACTAAACACAATTAAAACCACTCTACAACCCCCATCCGC
ACGATTCCTAGTCCACCTGAGCACAAACATCTATCTAGTGATGAACGGCAAGTACAGCAC
CGCCGTTGTAGTACATCTGAACACATGTGAAAACCACAAGAATTCCTAGTGGGGACTGAA
CTGAAGGTGGACAGTGAGGAAATCTGTAAACTTGAAGTGAAGAACAAAGTACCAAACTAT
TTTCTCCCTTCTGAAACTAGTAGTAGTGCCTCACTGGAAGGAACTGAAAAAGACAGGTTC
TCTTCCATCAGTACTAATATTTATATGGAGGCGATATGCTGCTGGTATTAATTAATCCCA
CTGTGCTGCAGCTGTAGCTCGAGAATTAAGGGCATAATCCAAAACGGCCGTTTTCTAACA
AGAAATAAACAAATGAGCAGAAACAAATCAAGTAAACGCCAGTGGGCAGAGAAGAACGGA
GCCCCTTTCCCCTACAACAACGAACAGCTCAACGCATCAAGCGCTGTAATTTTCAGACAC
AGCAGCAGCCCACGGCGCGCGCAACCTAGGAGAGGAGGAAGAAGAAGAACCACCCAAGAA
CAGCACCCGACCCAACGGTATGAAGGCAGAATCGACGATTCGAACGGCCGAGAATGCGGA
GCCGCCGGCGCTTGGCACGTACCTCTCGACGGCGCTCGCCGGGCGGGCGGGCGGAGCCCC
GGTGGAATGCGCGCGAGCAGCTGGCCTGGGACGCTCCGGTGGCCGCTCCCTCGTCACCGG
ACCCTGGAGACGCCGGGCACGGGAGGGAGGACTTCCCGCCGGGTCTTGGGAGAGAGAGAG
AGGGACGGGGGAGAGCAGACGACGGCGACGGCGACTCCGGAGGAGAAGGGAGGGGTGCAG
TTAAGGGGAGGAATGAAACGGAAGGAGGGGGTGGGGTCCACCACTGTGCTCAGTCAGTCA
CTGGTGCACTGCCCCGTCCGTTTTCCCCTGCTTTTTCGGCGGTATTAATGAAACTGTAGA
TGCGGTAATGTAGTGAAGGTGGTGAACCGGCACAGTCAAAGTGGTAGTAGAGTGGTTACT
GTGCCACTCGCAACCAAACGGTCGAAACCTGGTGTGTGTGACTTGGACAGTTTTTTTTCG
CGTAACAATGTAAGCATCAGGACTTCAATTTTGGTGGGGTAGTTATATCGTTGTTCCCTC
TAACCATCCAATCATAGGTTGGTTCGTGTGTGACTTGAATAAATCAGCACTTATGTCACT
CGAGAGATTGTAGAAAAGGAAAAAAAATAGTTGCTTGCATAAGGCCTAATTAGGCCCGTG
CAAGAAGAAAACAGGTTGTTTGATTGCCCACATACATTGTTAGGCAGCATCGCACGAACT
ATAAAGCATCACCGAGTCAGATCCAACACTACGCCCGAATCGGCCGTTTCTCGAGAGCCA
GGCTCGGGCGAAGCAGGGGAAGGGAACGCGGTACTAAGCACGTGCGACCAGGGAGATAGT
GCGAGCTCGCACGCGTCTCCGAAAAACAGGCGGGAGGATTTCGGCTCACCTCCCATCGAT
TTGGTCGCCCTATTTAGGCCCCTTCCTTTCACCGCCCAAAGTCCTGCCACCCTTCCCTCC
CCCCTTCGAGCTTCCCGCCGACGCGTTGGCACCAACGAGTAGGTAAGCGAACCTCCTTCA
CCGATCAACAGTCCATGGTGGCGGCGGCTCCTGTCATTAACTTCTCCCAATGTTCCTGCC
CCCCCCCCCCCCCCCC