Contig Data
morexGenes
Links



Map Locations of contig_39609 (5003 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_39609

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_55054 1 1706 bp MLOC_55054.1 Available Available LOC_Os06g36180.1, FRAME:-2, EVALUE:0.0, 13106.m03737 protein amino acid transporter, putative, expressed





CDS Structure of MLOC_55054






Contig Sequence (5003 bp)

>contig_39609 5003 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCACACACACAACCCCACCCCACAAAGCTGATTCTGTGTAGCCAAACAAAT
CAGTTCCAAAAACTTAGCCGGCAATACGCCAAACAACTCTAGCAATTGCACATAAAAAGA
AGAGGTGTTGTGAGATTTTCCTCTCGTTACCGAAAGAACATCGAGGAGTCCCAGCCCATT
TCCTCCTATTCATGACATCCCCGTTCAAAACAACATCTTGAAAAACTTGCCACAAGAAAA
TTTGAAATTTAAGGGGGATTTCGGCCTTCCAAGTGCACTTAAAGTCATACCCTGCAAGTT
TTGTTTTCCAGGTGCTCATAAACTGATTTTGGCAGTGAATCTCTGCTTAGGCAAAAGGCT
TGCGCAAACATAAGTTGGTGAATTTATTCTCAAGTAACATATTTATTCACAGCTTCGTCT
TGAATGGCACATAGTTCTTGAGCGACTGGGTGATCCCCTGCACGGAGGCAACGGTCACCG
CCACCGTCACCGCAAAGCACATGAAGCTCAGGCTCTGCAGCACCACCCACTTCTTGGAAA
ACCTCTCCACTTTGCTCTGTCGTTTGTACATCTCCACTGGGAAGTACACGGTGAGCGGCC
AGAAGCTGAGCGCGCCGAGGAGGCCAAGGATGACGTTGAAGAAGGGCAACGAGATGGCAA
GGACCGTGCTTACGACGACGAACGCCGTTCTCCACACCAGCTTGAACATGTTGACGCTGA
ACTTGCCGGCGGCGAAGGGATGGTACCGGCGGACGACGAAGTCTGAGCTCGGCCACCGTG
CCGCAGCCCAGCTCTCCACGGCGGCGTAGATGGGCTGGCAGTACACCTGGTAGGCACCGA
TGAGGTGCACGACGATGCAGATGTTGGCGAAGTCGATGAGCCAGAAGGGCTCGTAGAAGC
CGAACCCGGTGAGCATGTTCCCCGGCGCCGCATTGCCGAAAGCAGCGTAGCCGAGGCAGC
CGCAGAGCATGTAGAAGGCCGTGGTGGTGGAGACCCCCAGTAGGTTTGCCTTCCTCATTG
TCTTGTTCTCGGCCGGCGGCGCCTTCACCGTGTCCTGCATTTCCAGGTACACGCTATTAG
TGAGTAGTGACCGTAATTTACGAGCGCAGTACTTTTTGGGCAATGGTGTATGTGAATTTT
TGTGACATGCATGCCTGGATTTCTATGAGAACCATGGAGTATGAGTAGGCGAATGCAATG
TTGCCGAGCGCTTGCAACGTCAACCATATCTTCTGTGCTGAATTAGTGACGTCTATCCCG
ATTTCAGTGCCGCCCATTGTTGTCTTGCCAGTAGGACCTGCATAGTTACACGAGGGAATA
GGGAATGCATTAGGTCCTTTCCAGTGTTTCACGGGGTATAGATGCTAAACGTGCTATATA
AATAAAATGTAATGTGGCAAAGCATATAAAGATGAAAGAGAGCATTACGGTGATCTCAGA
AAAAACTATGCTAAACGTGTGAACCTATATAAAATAACTATCAATCAATGCATGAATGAG
TTTAAGTATTAAAAAAGCCAAGAGTGAAGCTTAACTACTGGGAGATCCCAAACACGACCA
TCTATAAAAGATAAACTTGTATGCATTGAGAAGAGTACTCCCTGCGTTTTTATTTACTTC
ACATATTAACTTTGATCAAAGTCAAGCTTTGTAAACTTTGACAAAGTTTAAAGATGAAGA
TTTTAACATATACAATAAAAATGAATATTATATTTATTATTGGATGTACTTTCACATCAT
ATAGATTTGTTATGATAAATATTTATATTTTTTTCTATAAACTTGATCAAATTTTATGAA
GTTTGACTTCAGTCAACTCTAATGTGTAGAGTAAATAAAATCGGAGGAAGTAGTTTCAAT
GTTTTTAATGTAGTTAGCACTTCATCTAAAGCACCGATGCATTGGAAGAAGTTTTAATGC
GTTGATCTCTTGGTATGAATGTTCTTGATTCTATACCTGATATGGTCTGTGCCAAGGCGA
GGCCAACGCCGATCGCGGAGTAGGAGAAGGACATGACTGCGGCGAGGATCGACAGCCAGG
CCATCTCGTGGAGGTTGGGGAGCTGGGAGAAGACGATCTGGGAGATCCCAAACACGACCA
TGTACATGGTAGTGTACACGCCGCAGTCGGCAGAGTGGCCGTTCTTGTGGAAGCAGTCGG
CCTTGTACAAAGCCCTATTCGATCATCCCACCAGAAGAACAAACAGTGAGTTCAACCGAT
CGTAAATGGCACAAATTAGCTGAAACTTGCATGGGTGAGTCGGGTCGTCGACTTACGCGG
CACTGATCGATGCTGTAATGGTGTACCCGATTGCAGTTCCAACGAGATTAACGTACTGGC
AGAGGCCACAAAACCACACCTGCCTGCTACCTACATTTGCAGGCCAAGGTAGCAGTGTAA
ACATTGCCTGAATTCACAGAGAAAATTACTGGTTTGATGTTCACGCCACAGGCATGAGGT
ACCTAGGTAGGACTCGACGGCCTCCATGTAGGTGTAGTTCCTCTTCCCGGCAACGGCGTC
GTCGCTGCGGTAGCAGTCGGCGAGGAGCGAGGAGGTGTAATAGGTGACGGCGGCGAATAG
GAAAAGGGTTAACGACCCGGCGATCCAGCCGAGCTGCGCCACGGACCAGGGCAGAGATAG
CACGCCAGAGCCGATCACAGCCGTTATGATGTGCGCGCTCGCCGTCCACACCGTTCCTGC
TCAACCGCGAGGTCGACCGCACCAGTTAGTCGGAGATGATGATTAGTTTCGAGAAGAGAT
ACCAGAATACCAGATTGATCTGCAGTGCAATAGAGAGCCGGATGAGTATGTTTTCCTTGC
CTGTTCTCTTGGGCTTGCCGTCGTCGTCGACGGAACCATGGCCGATGACCCGCCGACGGT
CCGCCGCGCCGTCTGCCCGTCCCATTTCGCTATCTGGTGTGGTGGAGTAGAGTGTTTGGC
CCCGGGTTCCGTCCTCACTAGTTATTAGAGTCACGTTTCGGGAGCCGTACGGAGCTAGAG
ACAAGGAAGAAATCTTAAGGATATGTTTCACTAATTTCAGTATGATCTTGCTGCTAAATC
TCTCTCTTTATCTTCTCTGTCTATCTATATCTGTGGGCGCTGCTAGGCGTCCGCGGGCCG
ATCTTTTGTCAGATCGCTAGTCACCAACGTTATCGAATGTATAATGGGTATATTAATTTT
GCAGCATAGATTGTGTTGCAGATTTTTTTGCAACACAAAATATGTTGCAAAAATGTGTGT
AGATTTATTTTTTACAGCAAAGTTCGTTATAGAATATTTTCCGCAACAAAGATCGTGTTG
CAGAAACATATGTAGAATTTTATTTACAACAGAGTTTGTTATATAATATTTTTTACAACA
AAGATTGTGTTGCGGAAATATCTCTAGAATTTTACTTACAACAGTTTTTATTATAAAATA
TTTTCTGCAACAAAAATCGTGTTGCGGAAATATATGTAGATTTTTTTTGCAACGAAGTTT
GTTATAATTTTTTTCCGCAACAAAGATCATGTTGTAGAATTGTTTGTAGAATTTTTTTAA
ATAGAAATCATGTTGCGGAAACATGTGTAATTCTTTTTTTTATAAGAGAGGCCTTGTTGT
AGAAAACTGTGCAACGAAGATAATATTGCAGGAACTGTACGACGGGCGGCACTGGCAGTT
GCGACGTTGAACGATTGAGACGGCAAAAAAGGCTCCATCGATCTCTCTTCCTGCAACAAG
ACCTTGGTTCCAAAAATAAGATTTTGGTTGCAAAATATCTTCTCAATTTTCCTCCAGCAA
AATCCTTTGTAAAAGTTACAACATCTTTCACCCCTTCTCTATTTTCCGCAACTGGACCTT
GTTGCGAAAATTCCGTCTAAAGCAATTGTAGCATTACTTCGTGGATTCCGTCCACAAAAT
TAGTGGTGAGCGACACATCCTATAGCATCCGATACCCGACCTATAAGGCCGACACCTTGA
AGCAGCCGTTCAAAATGAATCGAACGGCTGGACATGTGGCGGATGTTACGCGTAGGATCA
GCCGGCAGATTTAGATAATTTTCCTATATCTATATATCTACATATCTACATATCTTTATT
ATTAATGAGGAGTCCGTATATGGTTTGGATTCAGTTTTTGTCCCTACATCCAAAACACAT
TAACTCAACCAAATCTAATAAAATCTTAATCAAACCTTAACTAAATCTAAATTTTCCTTA
TCTTTCCCTGCTCATACCCAAATGAAATTAAAATTTAGAAAATCTCTATTATTGAAAAGA
ATCAATATGTCATTTGGGACTCAGGTTTTGGCCCTCCAACCAGAACAACGAACCGAATTA
ACTAAATCAAATCAAATTTTACCAAAACCTCTACAAAATCATTTTTTTGTCTTTAGTATC
CATACTCAAATCAAATCAAATCTTACTTTAAATCCTCAACTAAACCAAAACTTCCTTGCT
TCGCCCTACCCATCCTTAAATCAGAATTTACAAAATCTCTATTATAAAATGAGTGCATGA
GTCGCTTGCGACTTAGATATCATCCCTCCAACCTAAACCACATCATGCATTAACTCAATC
AAATCATATTTTATCAAAATTTCAACTAAATAAAAAATGTCCTTGTCTTTTCGTACCCAT
ACCCAAATCAAATCAAATTTTACCAAAACCTCAACTAAATTAAAACTTTCCTTGTTTTTC
TTACCATGCTCAAATAATTTATAAATATGATGGGTGTGAGGTATATGTCGGACATGATTG
GTGTTGAACCGTTCAAATATGCATGCCCCCATTGCAACACACATGCTATTAGCTAGTATA
TTATATATACTACTACCTAAAAAACACATAACGTTTTGTCTCCCATCTCCCATCATCCCA
CCCCTTCACCTGCGTCCCCCTCCCACTAGGTTTTTCTATCCCTTCGTCCGCGGGTCCACC
CTCCCTCCCCCTATCGATTTTATCCATCAATTTTTGCTGATGACGAGATGATGTATATAC
TTTTCGCTCCTCGTTGGTTACCC